prot_C-tenellus_contig7860.2.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7860.2.2
Unique Nameprot_C-tenellus_contig7860.2.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length171
Homology
BLAST of mRNA_C-tenellus_contig7860.2.2 vs. uniprot
Match: D8LC02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC02_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 7.180e-24
Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 0
Query:   69 IDNSLIIGGVAAVGGLLLGAGLVAFTENQGKRTVERGGLSDNMQNKFSAQFMEDDVLEEVKDVDDVRERMRQALRKNQSEEEAEAMTKAAVEKAKEAADDGW 170
            ++  +I GG+ AV GL +GAG+VA TE  G R+ ERG LS   + K  A FMEDDV+EE  DVDDVR  MR+ALR NQ+EEE  A+T  A ++A+E ADDGW
Sbjct:    2 VEQDIIYGGLVAVAGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVEET-DVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 102          
BLAST of mRNA_C-tenellus_contig7860.2.2 vs. uniprot
Match: A0A836CFV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.580e-19
Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = 0
Query:   61 TSVGLQMEIDNSLIIGGVAAVGGLLLGAGLVAFTENQGKRTVERGGLSDNMQNKFSAQFMEDDVLEEVKDVDDVRERMRQALRKNQSEEE-AEAMTKAAVEKAKEAADDGW 170
            +S  + ME+D + IIG  A VGGL LG GLVAFTE QG +T ERG + + M NK  A+ +ED  LEE  DV  V +RMR AL+++++EEE AE   K    ++KE  DDGW
Sbjct:   50 SSTAIAMEMDQNTIIGIAAGVGGLALGIGLVAFTEQQGVKTAERG-IDEGMANKLQAKLLEDFELEE-NDVTSVTDRMRAALKQDKTEEELAELAAKQLAARSKEREDDGW 158          
BLAST of mRNA_C-tenellus_contig7860.2.2 vs. uniprot
Match: A0A6S9FQI8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FQI8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 8.360e-13
Identity = 43/118 (36.44%), Postives = 70/118 (59.32%), Query Frame = 0
Query:   54 VALPFGKTSVGLQMEIDNSLIIGGVAAVGGLLLGAGLVAFTENQGKRTVERGGLSDNMQNKFSAQFMEDDVLEEVKDVDDVRERMRQALRKNQSEE-EAEAMTKAAVEKAKEAADDGW 170
            VA P  ++S      +D ++I+G    VGG   G GL+AFTE QG+RT ERGGLS++M  + +   +ED  ++ V D+  +  ++  AL++  S++ +   MT+   +K  + ADDGW
Sbjct:   40 VASPTQRSSSTSLCMVDQNVIMGTAIGVGGFAFGIGLIAFTEAQGERTKERGGLSESMSTRIAGALLEDVEVDSVSDLGSLTSQLEAALKETGSKDLDNLEMTEEEKQKMIDDADDGW 157          
BLAST of mRNA_C-tenellus_contig7860.2.2 vs. uniprot
Match: K0TE04_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TE04_THAOC)

HSP 1 Score: 69.3 bits (168), Expect = 8.730e-12
Identity = 41/104 (39.42%), Postives = 68/104 (65.38%), Query Frame = 0
Query:   69 IDNSLIIGGVAAVGGLLLGAGLVAFTENQGKRTVERGG-LSDNMQNKFSAQFMEDDVLEEVKDVDDVRERMRQALRKNQ-SEEEAEAMTKAAVEKAKEAADDGW 170
            +D ++I+GG  AVGG++ G GLVAF EN G+R+ ERGG LSD+M  + +   MED  ++ V D+  + +++  AL ++  +E+E   +++   ++  E ADDGW
Sbjct:   53 VDTNIILGGGIAVGGVVAGIGLVAFAENMGERSKERGGGLSDDMATRITGGLMEDVEVDSVGDLSSLTDKLEAALMESGGAEQEQLQLSEEDKKRIAEEADDGW 156          
BLAST of mRNA_C-tenellus_contig7860.2.2 vs. uniprot
Match: A0A7S1TQH8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQH8_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.110e-10
Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = 0
Query:   69 IDNSLIIGGVAAVGGLLLGAGLVAFTENQGKRTVERGGLSDNMQNKFSAQFMEDDVLEEVKDVDDVRERMRQALR 143
            +DNS++IGG   +G  + G GL+AFTE QG+RT +RGGLS  M ++ SA+ +ED   +E  ++  + ERM  ALR
Sbjct:   37 MDNSILIGGTVLLG-TIAGVGLIAFTEQQGERTSQRGGLSGEMTDRLSAKLLEDYESDESGEISQLTERMEAALR 110          
BLAST of mRNA_C-tenellus_contig7860.2.2 vs. uniprot
Match: A0A7S1TPT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPT4_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.730e-7
Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   69 IDNSLIIGGVAAVGGLLLGAGLVAFTENQGKRTVERGGLSDNMQNKFSAQFME 121
            +DNS++IGG   +G  + G GL+AFTE QG+RT +RGGLS  M ++ SA+ +E
Sbjct:   37 MDNSILIGGTVLLG-TIAGVGLIAFTEQQGERTSQRGGLSGEMTDRLSAKLLE 88          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7860.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LC02_ECTSI7.180e-2455.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFV7_9STRA2.580e-1950.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9FQI8_9STRA8.360e-1336.44Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0TE04_THAOC8.730e-1239.42Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1TQH8_9STRA1.110e-1046.67Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1TPT4_9STRA1.730e-750.94Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..170
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..170
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7860contigC-tenellus_contig7860:3314..5498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7860.2.2mRNA_C-tenellus_contig7860.2.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig7860 1132..5959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7860.2.2 ID=prot_C-tenellus_contig7860.2.2|Name=mRNA_C-tenellus_contig7860.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=171bp
MRYSGVFIAAIAAAFLPCISAFFPGLPLHSRAAARPARTVRSPWADRTTG
ATTVALPFGKTSVGLQMEIDNSLIIGGVAAVGGLLLGAGLVAFTENQGKR
TVERGGLSDNMQNKFSAQFMEDDVLEEVKDVDDVRERMRQALRKNQSEEE
AEAMTKAAVEKAKEAADDGW*
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