mRNA_C-tenellus_contig7837.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7837.1.1
Unique NamemRNA_C-tenellus_contig7837.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Match: D8LJ11_ECTSI (Kinesin motor domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ11_ECTSI)

HSP 1 Score: 422 bits (1084), Expect = 5.790e-138
Identity = 220/249 (88.35%), Postives = 233/249 (93.57%), Query Frame = 1
Query:    1 QASLEQGMNYTVIVSFLEVYNENIRDLLNDSGEFLDLREDPIKGPTVSGISEVVTRTPEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKINIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNVTRNSLSVNYHISEYVNLIGSLRTEITNLKHQL 747
            +AS  QG  Y+V VSFLEVYNENIRDLLND+GEFLDLREDPIKGPTVSG++EV  RTPEEIM LLHQGN+SRTQQAT+AN  SSRSHAVLQVVVESRDK P T++ ++IGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGE+GNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTN TRNSL VN+HISEYVNLIGSLRTEIT LKHQL
Sbjct:   94 RASEVQGRRYSVTVSFLEVYNENIRDLLNDTGEFLDLREDPIKGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAASSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGERGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEITRLKHQL 342          
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Match: A0A7S2W525_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W525_9STRA)

HSP 1 Score: 347 bits (889), Expect = 5.720e-118
Identity = 183/231 (79.22%), Postives = 206/231 (89.18%), Query Frame = 1
Query:   55 VYNENIRDLLNDSGEFLDLREDPIKGPTVSGISEVVTRTPEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKINIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNVTRNSLSVNYHISEYVNLIGSLRTEITNLKHQL 747
            VYNENIRDLL+D  E+LDLREDPI+GPTV+GI+EV   +  EIM LLH+GNR+R+Q  T AN+VSSRSHAVLQVVVE+R+K    ++KI IGKLSLVDLAGSERAAAT+NRGVRL EGANINRSLLALGNCINALGEKGNKG FVPYRDSKLTRLLKDSLGGNCRTVMIANIS + SSFEETLNTLKYANRAKNIKT V RN +SVN+HISEYV+LI +LR+EI++LK QL
Sbjct:    1 VYNENIRDLLSDVEEYLDLREDPIRGPTVTGITEVEVASAVEIMDLLHRGNRNRSQHPTAANEVSSRSHAVLQVVVENREKAEGAVAKIKIGKLSLVDLAGSERAAATKNRGVRLQEGANINRSLLALGNCINALGEKGNKGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISSSVSSFEETLNTLKYANRAKNIKTTVQRNVVSVNHHISEYVSLIENLRSEISSLKTQL 231          
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Match: A0A482S7X7_9ARCH (Kinesin motor domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X7_9ARCH)

HSP 1 Score: 337 bits (863), Expect = 2.670e-112
Identity = 175/222 (78.83%), Postives = 193/222 (86.94%), Query Frame = 1
Query:   13 EQGMNYTVIVSFLEVYNENIRDLLNDSGEFLDLREDPIKGPTVSGISEVVTRTPEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKINIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNVTRNSLSVNY 678
            +QG+ Y V VSFLEVYNENIRDLL+D  E+LDLREDPIKGP V+ I+E+   + +E+M LLHQGN  R+Q AT AN+VSSRSHAVLQVVVE RD+ P T++ I +GKLSLVDLAGSERAA T+N G RLVEGANINRSLLALGNCINALGEKGNKG FVPYRDSKLTRLLKDSLGGNCRTVMIANIS A SSFEETLNTLKYANRAKNIKTNV RN L+VNY
Sbjct:  169 QQGVQYKVTVSFLEVYNENIRDLLSDVEEYLDLREDPIKGPVVASITEIEATSGQEVMQLLHQGNAKRSQAATAANEVSSRSHAVLQVVVECRDRAPGTVANIKVGKLSLVDLAGSERAANTKNVGARLVEGANINRSLLALGNCINALGEKGNKGNFVPYRDSKLTRLLKDSLGGNCRTVMIANISAAESSFEETLNTLKYANRAKNIKTNVQRNVLNVNY 390          
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Match: W4GMD4_9STRA (Kinesin-like protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMD4_9STRA)

HSP 1 Score: 340 bits (873), Expect = 1.680e-110
Identity = 179/252 (71.03%), Postives = 209/252 (82.94%), Query Frame = 1
Query:    1 QASLEQGMNYTVIVSFLEVYNENIRDLL---NDSGEFLDLREDPIKGPTVSGISEVVTRTPEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKINIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNVTRNSLSVNYHISEYVNLIGSLRTEITNLKHQL 747
            Q  +   + Y V VSFLEVYNENIRDLL   +D   +LDLREDP+KGP V+ +SE+V    EE+M LL +GN++R+Q+AT AN VSSRSHAVLQV VE  + TP T++ +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK N+G FVPYRDSKLTRLLKDSLGGNCRTVMIANIS +  SFEET+NTLKYANRAKNIKT VTRN L+VN+HISEYV+LI +LR EITNLK Q+
Sbjct:  242 QCKVPNLVQYRVTVSFLEVYNENIRDLLRSDHDQDTYLDLREDPVKGPVVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKAQM 493          
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Match: A0A024TUT4_9STRA (Kinesin-like protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUT4_9STRA)

HSP 1 Score: 343 bits (880), Expect = 1.730e-110
Identity = 180/252 (71.43%), Postives = 209/252 (82.94%), Query Frame = 1
Query:    1 QASLEQGMNYTVIVSFLEVYNENIRDLLN---DSGEFLDLREDPIKGPTVSGISEVVTRTPEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKINIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNVTRNSLSVNYHISEYVNLIGSLRTEITNLKHQL 747
            Q+ +   +NY V VSFLEVYNENIRDLL    D   +LDLREDP+KGP V+ +SE+V    EE+M LL +GN++R+Q+AT AN VSSRSHAVLQV VE  + TP  +S +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK N+G FVPYRDSKLTRLLKDSLGGNCRTVMIANIS +  SFEET+NTLKYANRAKNIKT VTRN L+VN+HISEYV+LI +LR EITNLK Q+
Sbjct:  269 QSRVPNSVNYRVTVSFLEVYNENIRDLLRSDPDQDTYLDLREDPVKGPLVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPGMVSVLKTGKLSMIDLAGSERAAVTQNRGLRLIEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKTQM 520          
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Match: A0A485KW97_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW97_9STRA)

HSP 1 Score: 340 bits (873), Expect = 2.310e-108
Identity = 179/252 (71.03%), Postives = 210/252 (83.33%), Query Frame = 1
Query:    1 QASLEQGMNYTVIVSFLEVYNENIRDLLN---DSGEFLDLREDPIKGPTVSGISEVVTRTPEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKINIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNVTRNSLSVNYHISEYVNLIGSLRTEITNLKHQL 747
            Q+ +   + Y V VSFLEVYNENIRDLL    D   +LDLREDP+KGP V+ +SEVV    +E+M LL +GN++R+Q+AT AN VSSRSHAVLQV VE  + TP T++ +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK N+G FVPYRDSKLTRLLKDSLGGNCRTVMIAN+S + +SFEET+NTLKYANRAKNIKT VTRN L+VN+HISEYV+LI +LR EITNLK QL
Sbjct:  217 QSRIPTLVTYRVTVSFLEVYNENIRDLLRTDPDQDTYLDLREDPVKGPIVADLSEVVASNADEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANVSMSVASFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLREEITNLKAQL 468          
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Match: W4GMA4_9STRA (Kinesin-like protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMA4_9STRA)

HSP 1 Score: 340 bits (873), Expect = 3.840e-108
Identity = 179/252 (71.03%), Postives = 209/252 (82.94%), Query Frame = 1
Query:    1 QASLEQGMNYTVIVSFLEVYNENIRDLL---NDSGEFLDLREDPIKGPTVSGISEVVTRTPEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKINIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNVTRNSLSVNYHISEYVNLIGSLRTEITNLKHQL 747
            Q  +   + Y V VSFLEVYNENIRDLL   +D   +LDLREDP+KGP V+ +SE+V    EE+M LL +GN++R+Q+AT AN VSSRSHAVLQV VE  + TP T++ +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK N+G FVPYRDSKLTRLLKDSLGGNCRTVMIANIS +  SFEET+NTLKYANRAKNIKT VTRN L+VN+HISEYV+LI +LR EITNLK Q+
Sbjct:  242 QCKVPNLVQYRVTVSFLEVYNENIRDLLRSDHDQDTYLDLREDPVKGPVVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKAQM 493          
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Match: A0A1V9ZPN4_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZPN4_9STRA)

HSP 1 Score: 337 bits (865), Expect = 4.370e-108
Identity = 179/245 (73.06%), Postives = 205/245 (83.67%), Query Frame = 1
Query:   22 MNYTVIVSFLEVYNENIRDLLNDSGE---FLDLREDPIKGPTVSGISEVVTRTPEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKINIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNVTRNSLSVNYHISEYVNLIGSLRTEITNLKHQL 747
            + Y V VSFLEVYNENIRDLL    E   +LDLREDP++GP V+ +SEVV    EE+M LL +GN++R+Q+AT AN VSSRSHAVLQV VE  + TP T+S +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK N+G FVPYRDSKLTRLLKDSLGGNCRTVMIANIS +  SFEET+NTLKYANRAKNIKT VTRN L+V +HISEYV+LI +LR EITNLK QL
Sbjct:  173 VQYRVTVSFLEVYNENIRDLLRSDPEEDTYLDLREDPVRGPVVADLSEVVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEVTPDTVSVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVTHHISEYVSLIANLRQEITNLKTQL 417          
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Match: F0Y736_AURAN (Kinesin-like protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y736_AURAN)

HSP 1 Score: 331 bits (848), Expect = 1.670e-107
Identity = 176/261 (67.43%), Postives = 207/261 (79.31%), Query Frame = 1
Query:    4 ASLEQGMNYTVIVSFLEVYNENIRDLLN-------------DSGEFLDLREDPIKGPTVSGISEVVTRTPEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKINIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNVTRNSLSVNYHISEYVNLIGSLRTEITNLKHQL 747
            ++  + +   V VSFLEVYNENIRDLL              ++ EFLDLREDP+KGP V+GI+E+   +  E+M LL +GN  R+Q AT AN+VSSRSHAVLQ+ VE+R++   T + I IGKLSLVDLAGSERAA T+NRG RL EGANINRSLL LGNCINALG+K N+GQFVPYRDSKLTRLLKDSLGGNCRTVMIANIS +++SFEETLNTLKYANRAKNIKT+V RN L VN+HISEYV+LI +LR E+T LK QL
Sbjct:  132 SATSKSIRIKVTVSFLEVYNENIRDLLGSCEDPADVGGAAKEASEFLDLREDPLKGPVVAGITEIEANSATEVMALLQRGNAKRSQHATAANEVSSRSHAVLQITVETREQAEGTRAAIQIGKLSLVDLAGSERAANTKNRGDRLKEGANINRSLLTLGNCINALGDKSNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISASNASFEETLNTLKYANRAKNIKTDVKRNVLEVNHHISEYVSLIQNLRNEVTVLKQQL 392          
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Match: A0A067CGK1_SAPPC (Kinesin-like protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGK1_SAPPC)

HSP 1 Score: 330 bits (845), Expect = 5.320e-105
Identity = 177/245 (72.24%), Postives = 204/245 (83.27%), Query Frame = 1
Query:   22 MNYTVIVSFLEVYNENIRDLLNDSGE---FLDLREDPIKGPTVSGISEVVTRTPEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKINIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNVTRNSLSVNYHISEYVNLIGSLRTEITNLKHQL 747
            + Y V VSFLEVYNENIRDLL    E   +LDLREDP++GP V+ +SEVV    +E+M LL +GN++R+Q+AT AN VSSRSHAVLQV VE  + TP T+S +  GKLS++DLAGSERAA TQNRG+RL+EGANINRSLLALGNCINALGEK N+G FVPYRDSKLTRLLKDSLGGNCRTVMIANIS +  SFEET+NTLKYANRAKNIKT VT   L+VN+HISEYV+LI +LR EITNLK QL
Sbjct:  167 VTYRVTVSFLEVYNENIRDLLRSDPEEDTYLDLREDPVRGPIVADLSEVVASNADEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEVTPDTVSVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVT---LNVNHHISEYVSLIANLRQEITNLKTQL 408          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7837.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ11_ECTSI5.790e-13888.35Kinesin motor domain-containing protein, putative ... [more]
A0A7S2W525_9STRA5.720e-11879.22Kinesin-like protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A482S7X7_9ARCH2.670e-11278.83Kinesin motor domain-containing protein (Fragment)... [more]
W4GMD4_9STRA1.680e-11071.03Kinesin-like protein n=3 Tax=Aphanomyces astaci Ta... [more]
A0A024TUT4_9STRA1.730e-11071.43Kinesin-like protein n=2 Tax=Aphanomyces invadans ... [more]
A0A485KW97_9STRA2.310e-10871.03Kinesin-like protein n=1 Tax=Aphanomyces stellatus... [more]
W4GMA4_9STRA3.840e-10871.03Kinesin-like protein n=5 Tax=Aphanomyces astaci Ta... [more]
A0A1V9ZPN4_9STRA4.370e-10873.06Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID... [more]
F0Y736_AURAN1.670e-10767.43Kinesin-like protein n=1 Tax=Aureococcus anophagef... [more]
A0A067CGK1_SAPPC5.320e-10572.24Kinesin-like protein n=2 Tax=Saprolegnia TaxID=476... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7837contigC-tenellus_contig7837:1495..6331 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LJ11
PFAMsKinesin
Model size747
Max annot lvl2759|Eukaryota
KEGG koko:K10401
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.2e-136
EggNOG OGsCOG5059@1|root,KOG0242@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size726
COG categoryZ
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7837.1.1prot_C-tenellus_contig7837.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7837 1495..6310 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790063.4815457-CDS-C-tenellus_contig7837:1494..16691680790063.4815457-CDS-C-tenellus_contig7837:1494..1669Choristocarpus tenellus KU2346CDSC-tenellus_contig7837 1495..1669 -
1680790063.4935246-CDS-C-tenellus_contig7837:2675..27501680790063.4935246-CDS-C-tenellus_contig7837:2675..2750Choristocarpus tenellus KU2346CDSC-tenellus_contig7837 2676..2750 -
1680790063.5061712-CDS-C-tenellus_contig7837:3066..31981680790063.5061712-CDS-C-tenellus_contig7837:3066..3198Choristocarpus tenellus KU2346CDSC-tenellus_contig7837 3067..3198 -
1680790063.5186248-CDS-C-tenellus_contig7837:3732..38241680790063.5186248-CDS-C-tenellus_contig7837:3732..3824Choristocarpus tenellus KU2346CDSC-tenellus_contig7837 3733..3824 -
1680790063.5296896-CDS-C-tenellus_contig7837:4253..43971680790063.5296896-CDS-C-tenellus_contig7837:4253..4397Choristocarpus tenellus KU2346CDSC-tenellus_contig7837 4254..4397 -
1680790063.5427365-CDS-C-tenellus_contig7837:5722..57971680790063.5427365-CDS-C-tenellus_contig7837:5722..5797Choristocarpus tenellus KU2346CDSC-tenellus_contig7837 5723..5797 -
1680790063.552121-CDS-C-tenellus_contig7837:6277..63101680790063.552121-CDS-C-tenellus_contig7837:6277..6310Choristocarpus tenellus KU2346CDSC-tenellus_contig7837 6278..6310 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790063.5601845-UTR-C-tenellus_contig7837:6310..63311680790063.5601845-UTR-C-tenellus_contig7837:6310..6331Choristocarpus tenellus KU2346UTRC-tenellus_contig7837 6311..6331 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7837.1.1

>prot_C-tenellus_contig7837.1.1 ID=prot_C-tenellus_contig7837.1.1|Name=mRNA_C-tenellus_contig7837.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=242bp
MNYTVIVSFLEVYNENIRDLLNDSGEFLDLREDPIKGPTVSGISEVVTRT
PEEIMGLLHQGNRSRTQQATKANDVSSRSHAVLQVVVESRDKTPSTMSKI
NIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGEKG
NKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYA
NRAKNIKTNVTRNSLSVNYHISEYVNLIGSLRTEITNLKHQL
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mRNA from alignment at C-tenellus_contig7837:1495..6331-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7837.1.1 ID=mRNA_C-tenellus_contig7837.1.1|Name=mRNA_C-tenellus_contig7837.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4837bp|location=Sequence derived from alignment at C-tenellus_contig7837:1495..6331- (Choristocarpus tenellus KU2346)
CAGGCCAGCCTAGAGCAGGGAATGAACTACACGGTCATAGTCTCCTTCCT CGAGGTGGGGTGTACCAGTTACAAATAATCTAGATAGATCGTCTGTAGGG ATGGGTATGCTCTATCACTTGCCATGTATACAAGAGGACCAAGTGGCGTA TTTTCTCACAGAGCATCTTTGATTCCCCCATAAAACCAAAATGCTTTCAA AAGGAGGGAACAGTCAGTTGTGGAGTGGGTAGATAGAGATGCCTAGGTTG TGTGCCATCTCCATGAAGTATGGCATGTGAGGCACTTCAACAAATAGAGA GAGAGGGAATCGAAGCAAGACGTGTGTGTATGTGTGTGTGTGTGTGTGTG TGTGTGTGCACTTGCTATGCATGGAAAAGGCTCAACAAACCTTTCATTCC TCACCACCCTGCACACCATGAGAGACATGCTACTGACACTCAAGCCCAAA CCGCCGACTCACTGTTGTACCATTACAATTAACTGCAAACGAACTCAACA ACATTTGGTGTGTCATACACACCCTCACATTAAGGTCTACAACGAGAACA TCCGGGACCTGTTGAACGACAGCGGGGAGTTCCTAGACCTCAGAGAGGAC CCTATCAAGGTACGTGAGTACTTGTTGCAGCATTGCTTGTCTCAAGTTCT ACGCGGTGCCTTTCCCATAATATTGAAAATATCGTTGACTCGTGTACTGT GGAGCAAACGCAATCCATGACTTGGGAAAAGAAGTGACAAAAAAGGGTCG GTCGCGCGCAAGTTGGTCCCACACGTTTGAGGCATTCAGTACGTCTACCT TGAAATATCAGAACGGTTTTTGTCTTTAACTTCTCCACACAGGTAGAGGT GATGTTGTATTGCTCTCTACGTGGTTGCCTAGATGAGCGGCGTGTCATTT AGGAACGCATACTGAGGAGAGCCAATGTATACGAGAGTAAGCCAGGTTTT GGTCGCTTTGTTTGCATCTTGAGTCAGTTTTTCAATCTTCTGTGATTCGC CCATATTTCTGTGGATGAGGTCCTAAGCTTGACTTGAGAGCGTTGGTTTC TCTATTGTTTTAATATTTTTTTTTAATTCAGAAAATTCAGAAAAATTCCT CCACGCATTTTGCAACTGAAGTACAATATTGCACATATTTATCAGCGTCC TTAAATTGCAACCCCAGGTATCTCTCATTTACTTTGGCCCAGGAGTACAT CAAGACCTCAAATGGTCTCTATTGTATTTAGACGGGATGTCACATGGAGG AGGATTTTTTTTATATTCGTGCAGTTGCTTACCATTGGCTAAGAATTTCG AAACGTTTTTTGAGAGCACTAAATATCATCTGAATTCAGAAATGTGTGGA GGTATGGGTGGGTTGACCATATGCATGTGATGTCCCACAAGATAGAAGGC AATGCTCTACACGTGATACCAAGGGTTAGGGTTAGGGTTAGGGTTAGATG GATGGAATGAGAACTGCGCCTCACAAGAGATTTCACATTCTAGACACTTG TGTCAGTGTAGCCAGCTGTAAAGCTGCTGAACACGGGTCAATCTTTGCCA AAACTGCAGTGCTGTACATTCCTAACGCTCAACAATGTATTCAACAGTAT TCTCATGTCAGCATCAAACAACCACTGATACTAATTTGAGTTAAACTGTA TGTTGTGGGGTTTACAGAGTGGAAAAACTGGGGTATCAACAACACACAAG TTAAAGATAGATTTCTCCGAGATAGATCCCTAGCCAAATACAGAACCACA CCCACACTCATCTAATGTCATTCATATTATCATTGTGTAATAGACTGTTT GGCTCAATATTACACATTCAAACTTGAACTCGTGGCACACCGCAACGTTG CGTCTCCCCTCCTCCTTGTCTCATATTCCATCTCATATTCCATCTCATAT TCCATCTCATATTCCATCTCATATTCCATACCAGGGCCCAACCGTCTCCG GCATATCTGAGGTAGTCACCCGTACTCCCGAGGAGATCATGGGACTGCTC CACCAGGGGAACAGGAGTCGCACTCAGCAGGCCACCAAAGCCAATGATGT GTCCTCCAGATCTCATGCAGTTCTCCAGGTCTCGTTTAACCTTGGAAAAA TGCACCAACGCACACAATCGACAAGCAGTACCTGCCAAAAGACATGAGTT CAAAATCCTGTCCCTCTGAAACCGAATCCTTGCAACCCGGAGGTACAACA CGCCTTATCACTGCACTTGTGGCATTGAAGTTGATCTCTCAACATCCCAA CTCGGGGTTAGAATGTGACCCCAACTGGACCGGTATGCGTGGTGTAACCG GCGTTACAATATATAGCACTCTACGTGAGATAGGGGCAGGCAGAAACTTC AACTCCTTACCCCACCTGAGTACATCCCTCTACATCAAAGCAACGACAGT GGACTTGCAAAGCTAAAAATCCATTCCAAATTGTAATTGAAAGTATGTTA CTATGAAATGTTACCGCCTTACGTGTGGGCATGCACATTATCTGTCCTAT CACGCAGGTAGTGGTGGAGAGCAGGGACAAGACTCCCAGCACCATGAGCA AGATAAATATCGGGAAGCTCTCCCTGGTGGATCTTGCTGGCAGTGAGAGG TGCACACAGAAAGGGCATCGCTTGAAGGGTGTCAAGGGTGTCAGAGGGAG CAGGGAGAAAGGGATGGAGAAAGAAACGGTTCTATTTTGCTGACGCACCA GTCATCGTATTATCAAGAAGCGGGCAATAGTACACACACGAGTAACTGAA GAAATACCGTTGTCGTGTGCACAGGGGGTCTTAAAATTTAGTCCGAAATG TTTACCATAATGCGTAACTCACTATCTACAAGTAAGGAATTTCAGAGTTG TCAAGGGTGTAGAGGATTGAATGTTAGGCGTTGGTTTCAGAGGAATACGA GCTGGCCATGATCTGCCTGAACATGTGGCGCAAAGCACAGATTCTTCATT AATGTCTTTTCTCGAATATGAAAAAATCTTCATCTCATGTCAGTACTGCT ACGGTACTACGACGGTAGTACTACGATACTTCTACAGGCAAGACGTCCTA CTCTCATACTATGTACGCATGAAGACTTCAGTGCCTCGACCCTGTTGTTG CTGCCATCCTCCCCTCCATGCATGAGTGCCTAGGGCAGCTGCCACTCAGA ACAGAGGGGTGAGGCTGGTAGAGGGCGCAAACATCAACCGCTCACTGCTG GCTCTGGGCAATTGCATCAACGCTCTGGGAGAGAAGGGCAACAAGGGACA GTTTGTGCCCTACAGGTGATAGTTTTGTAACACCACTTGTATACTTTTCC CCCTTTAGTTGGGGCTGCATGGCTCCTTCATTGCCTGTCCAACGCCACGC TGCTGTTGCATAATAAATAATAATAATAATGCATAATAAATACATCCTCA GTACTCCTGCAATAAGCAATAAGCAACAAGCAACAAATGCTGTAGCCTTG TAGTGAGTCCCTTTTCCCAAGAAACTTTATTCCGATCTGAATCATACTTC TCTCGAACTCCACCATGGTAATATCAACGCATCTAGGATGAAGATGAACC GCCCCTGCTCCCTTCCGCCCAACATACACAGAGATTCAAAGCTCACACGC CTCCTCAAGGACTCCCTGGGTGGAAATTGTCGAACAGTCATGATAGCAAA CATCAGGTCTGTTGCATACCCTGAGTGCATGGTGTTGTTACGCATACGTT TCGATGAACAAGTTGCACGGGGGGGGGGAAAACCATGAATTTCATCATTA GACAGCTTGGCAAACTAACTGCCCTCAATCTTACTTTTATTGGAAGTAAT ACCTACAACACATCTCATTTACTCCTTGCACCCGTGCTATACAAGCGTTG TGTCTACATGTGCTTGGACTCTATATTTTCCCCCTCACTCCCCCCTCATG TGGAAACGAAGTGGGCACAACCCCAGACGCCTCCACGTCTTCTGCCCTGC CCTACCCTGCCCTGACCACTGCCCTGACCCTAGTATAGTCTGATCCAAAT ACACTACTTGATCCCCTCACATCTCCTCTTATCTAGTGAGTCCCTCCACC TTTCCTTGATTGAAATATCTTAGTCCATTCTTCATCCACCAACATCCTAA CTTGTCGATATCGATTGTTCACCATCATGTCTGTAGGCATATTTCGCCAG TTTCAAACCGAGACTGTACACCATACGTGGTTTTCCACCAAAACTTTCCT TTCACCAGGACAGAGTGGCTGGTACCACCTACTCTTCTGTTGTGCGATCT ACTTCAGCACCACATACGCATGAAGAAACTCCTCTTATCCCTTGCATCCC CATCCTTACCCCTTGCCCAGATGTAGCGGTGTCTCATTGCCCACGGAGAG AACAAAATTGTTACTTGGCACAGGTTTCTTCCTACTGCACCTCATTCCTC TCATTCTCTCCAATTGTTCCTAAGACGCAAAGTATCTGGGGGGAGGGGGA GGGGGGGGTCTACACCAGGGTGCCCATTTGGGCGAAAATCAGGAAAAGTG CATTTACATTATCCATCCAACATATGCAACAAAATCACACAAAATCGCGA CATGAAAAAAATTGACCCCAAATGGACAGCCGCCACCCCCCCCCCAGATA CTTTTAGCCCTTAACCCCGCTCATCCGGATCCCTTATTTCTTGCTCCCCT TGTTCAACACAGCGGAGCATCTTCCTCCTTTGAGGAGACCTTGAACACTC TCAAGTATGCCAACCGAGCCAAGAACATCAAGACTAACGTCACCCGTAAT TCTCTGAGTGTGAATTACCACATATCTGAGTATGTCAACCTCATTGGCAG CCTCAGAACAGAGATTACCAACCTAAAACACCAGCTA
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Coding sequence (CDS) from alignment at C-tenellus_contig7837:1495..6331-

>mRNA_C-tenellus_contig7837.1.1 ID=mRNA_C-tenellus_contig7837.1.1|Name=mRNA_C-tenellus_contig7837.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=726bp|location=Sequence derived from alignment at C-tenellus_contig7837:1495..6331- (Choristocarpus tenellus KU2346)
ATGAACTACACGGTCATAGTCTCCTTCCTCGAGGTCTACAACGAGAACAT
CCGGGACCTGTTGAACGACAGCGGGGAGTTCCTAGACCTCAGAGAGGACC
CTATCAAGGGCCCAACCGTCTCCGGCATATCTGAGGTAGTCACCCGTACT
CCCGAGGAGATCATGGGACTGCTCCACCAGGGGAACAGGAGTCGCACTCA
GCAGGCCACCAAAGCCAATGATGTGTCCTCCAGATCTCATGCAGTTCTCC
AGGTAGTGGTGGAGAGCAGGGACAAGACTCCCAGCACCATGAGCAAGATA
AATATCGGGAAGCTCTCCCTGGTGGATCTTGCTGGCAGTGAGAGGGCAGC
TGCCACTCAGAACAGAGGGGTGAGGCTGGTAGAGGGCGCAAACATCAACC
GCTCACTGCTGGCTCTGGGCAATTGCATCAACGCTCTGGGAGAGAAGGGC
AACAAGGGACAGTTTGTGCCCTACAGAGATTCAAAGCTCACACGCCTCCT
CAAGGACTCCCTGGGTGGAAATTGTCGAACAGTCATGATAGCAAACATCA
GCGGAGCATCTTCCTCCTTTGAGGAGACCTTGAACACTCTCAAGTATGCC
AACCGAGCCAAGAACATCAAGACTAACGTCACCCGTAATTCTCTGAGTGT
GAATTACCACATATCTGAGTATGTCAACCTCATTGGCAGCCTCAGAACAG
AGATTACCAACCTAAAACACCAGCTA
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