prot_C-tenellus_contig7830.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7830.2.1
Unique Nameprot_C-tenellus_contig7830.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length182
Homology
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BLAST of mRNA_C-tenellus_contig7830.2.1 vs. uniprot
Match: A0A6H5KH14_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH14_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 4.250e-31
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 0 
Query:   62 IQLQTGTTMDQATFQMLWSHLGQGAEASVGMVRLPASTGEVESLLAGRGVYTMASGDKPAAMKFFFYAKDTVGSTYLLQCTFLKAGSGTAEMIIKSDSPDAREGSNQVLGLVRGALDAYL 181
            ++ QTG T++   FQ LW+ LG G E+S  M ++PAST EVE LL  RGV TMASG+KPAAMKFFFYAKD +G TYL+QC+ LK      E+++KSD+PD  E +  + G+V+ A   YL
Sbjct:  711 VEFQTGITINSGQFQSLWAALGAGVESSFEMSKVPASTQEVEGLLTARGVNTMASGNKPAAMKFFFYAKDVLGLTYLMQCSVLKP-ERLLELVVKSDAPDPAESARVISGVVKEAFALYL 829
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BLAST of mRNA_C-tenellus_contig7830.2.1 vs. uniprot
Match: A0A835YU68_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU68_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.300e-14
Identity = 46/118 (38.98%), Postives = 66/118 (55.93%), Query Frame = 0 
Query:   64 LQTGTTMDQATFQMLWSHLGQGAEASVGMVRLPASTGEVESLLAGRGVYTMASGDKPAAMKFFFYA--KDTVGSTYLLQCTFLKAGSGTAEMIIKSDSPDAREGSNQVLGLVRGALDA 179
            L+ G  M    FQ LW  L + A     ++R PA TGEVE  ++   + TMASGDKP  M+FFFY    D     +L+QCT LK+ S   +++IK+ + DA   ++ V  +V+ A  A
Sbjct:  745 LRPGPAMGAPQFQALWGELAEAAVVQGVVLRAPAGTGEVEGRMSAACLRTMASGDKPETMRFFFYGYGSDNPSEVHLVQCTLLKS-SCALDVVIKTTAADAAPAAHAVAAVVKHAFGA 861
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BLAST of mRNA_C-tenellus_contig7830.2.1 vs. uniprot
Match: A0A7S4D7F5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7F5_HETAK)

HSP 1 Score: 69.7 bits (169), Expect = 1.020e-10
Identity = 46/125 (36.80%), Postives = 60/125 (48.00%), Query Frame = 0 
Query:   39 AEVDLLGIFSGGDDAGGREGDRAIQLQTGTTMDQATFQMLWSHLGQGAEASVGMVRLPASTGEVESLLAGRGVYTMASGDKPAAMKFFFYAKDTVGSTYLLQCTFLKAGSGTAEMIIKSDSPDAR 163
            A +DLLG    G  +        + L  G  +    FQ LW  L  G      +  LP      E  L    +YTMASGD P  MKFFF+AKDT G T+L+QC   K  S T  +++K+ S  A+
Sbjct:  268 ASMDLLGFDDDGPASAAPP--PPLALVEGAAVSGEEFQTLWGRLPDGCSKEYVLEPLPTQA-MFEERLQSHKIYTMASGDLPDMMKFFFFAKDTSGQTFLVQCIAQKQNS-TVNIVVKTTSEVAQ 388
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7830.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KH14_9PHAE4.250e-3153.33B2-adapt-app_C domain-containing protein n=2 Tax=E... [more]
A0A835YU68_9STRA1.300e-1438.98Coatomer protein complex, beta sub-unit n=1 Tax=Tr... [more]
A0A7S4D7F5_HETAK1.020e-1036.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015151Beta-adaptin appendage, C-terminal subdomainPFAMPF09066B2-adapt-app_Ccoord: 68..169
e-value: 2.7E-16
score: 59.6
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 53..179
e-value: 1.6E-11
score: 45.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7830contigC-tenellus_contig7830:4850..6546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7830.2.1mRNA_C-tenellus_contig7830.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7830 3618..6599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7830.2.1 ID=prot_C-tenellus_contig7830.2.1|Name=mRNA_C-tenellus_contig7830.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=182bp
MPGTGIVLHGSGSSSTSLRQGGGEGGVSQMGGGGGVEVAEVDLLGIFSGG
DDAGGREGDRAIQLQTGTTMDQATFQMLWSHLGQGAEASVGMVRLPASTG
EVESLLAGRGVYTMASGDKPAAMKFFFYAKDTVGSTYLLQCTFLKAGSGT
AEMIIKSDSPDAREGSNQVLGLVRGALDAYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015151B-adaptin_app_sub_C
IPR012295TBP_dom_sf