mRNA_C-tenellus_contig7821.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Match: D7FL57_ECTSI (Hypothetical leucine rich repeat kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL57_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 8.710e-18 Identity = 59/204 (28.92%), Postives = 110/204 (53.92%), Query Frame = 1 Query: 328 KWDNMERS-NLWSLRLGQVESAAKSIVHRLEEEEGPVSGARTTTSTMSAEDWQHVDNMIGKGAFGEVYLVDHCGVNAAAKVINVPWTGDHELHKQQQVIAKECSTIKNLQG-----SEHVVTLLDDTVHDKKQFIVFTKFLPGGDLRTSLNVAKEAGFMEEKLQKSVIMDVVAGMKHIHANHVIHGDLKSPNVMMDSHGRAKVS 921 K+D+++ +L+ L L + S + + R++ + + + AE + ++GKG FGEVYL D+ G NAAAKV+++ TG + ++Q+ ++ + ++ L+ S + V + + ++ + L GGDL T L +K+A + + + +I D+ GM +H + +HGDLKS NV++D GRAK++ Sbjct: 659 KFDSVKEGIDLYQLSLSEAASESVAEARRVKRQR------KLDQVEIPAEYLSITNELLGKGGFGEVYLADYNGHNAAAKVLHIAQTGALDETQKQREASQHRAFLRELEAMIRLRSLNTVNVYGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKA--LPGQQSRQIIRDICTGMAFLHGKNTVHGDLKSANVLLDGDGRAKIA 854
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Match: D7G7F2_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F2_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 7.360e-17 Identity = 50/149 (33.56%), Postives = 86/149 (57.72%), Query Frame = 1 Query: 490 DNMIGKGAFGEVYLVDHCGVNAAAKVINVPWTGDHELHKQQQVIAKECSTIKNLQG-----SEHVVTLLDDTVHDKKQFIVFTKFLPGGDLRTSLNVAKEAGFMEEKLQKSVIMDVVAGMKHIHANHVIHGDLKSPNVMMDSHGRAKVS 921 D ++GKG FGEVYL D+ G NAAAKV+++ G + ++Q+ ++ + ++ L+ S + V + + ++ + L GGDL T L +K+A + + + +I D+ GM +H + +HGDLKS NV++D GRAK++ Sbjct: 886 DELLGKGGFGEVYLADYNGHNAAAKVLHIARMGALDETQKQREASQHRAFLRELEAMIRLRSLNTVNVYGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKA--LPGQQSRRIIRDICTGMAFLHGKNTVHGDLKSANVLLDGDGRAKIA 1032
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Match: A0A6H5KA37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 1.750e-16 Identity = 54/158 (34.18%), Postives = 86/158 (54.43%), Query Frame = 1 Query: 490 DNMIGKGAFGEVYLVDHCGVNAAAKV-------------INVPWTGDHELHK---QQQVIAKECSTIKNLQGSEHVVTLLDDTVHDKKQFIVFTKFLPGGDLRTSLNVAKEAGFMEEKLQKSVIMDVVAGMKHIHANHVIHGDLKSPNVMMDSHGRAK 915 + M+G+G FGEVYL D+ G NAAAKV +N P +G + + Q++ +E + L+ H V + + I+ + LPGGDLRT L +++ + E+ + +I D+ AGM +H+ +HGDLKS N+++D+ GRAK Sbjct: 758 EEMLGRGGFGEVYLADYNGHNAAAKVQYIIHGFGRRDDVLNGPKSGQPDAVREKVQRKAFLRELDAMIRLRHP-HTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQP--LPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAK 912
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 1.770e-16 Identity = 50/143 (34.97%), Postives = 78/143 (54.55%), Query Frame = 1 Query: 490 DNMIGKGAFGEVYLVDHCGVNAAAKVINVPWTGDHELHKQQQVIAKECSTIKNLQGSEHVVTLLDDTVHDKKQFIVFTKFLPGGDLRTSLNVAKEAGFMEEKLQKSVIMDVVAGMKHIHANHVIHGDLKSPNVMMDSHGRAKV 918 + ++GKG FGEVYL D+ G NAAAK H+ Q++ +E + L+ S H V + ++ + L GGDLRT L +++ + ++ + +I D+ AGM +H +HGDLKS NV++D GRAK+ Sbjct: 830 NEVLGKGGFGEVYLADYNGRNAAAK--------HHQNDSQRRAFLRELDAMIRLR-SPHTVNVYGAVTSQPDHMVLVMELLSGGDLRTLLRTSEQP--LPQEQSRRIIGDICAGMAFLHEKDTVHGDLKSANVLLDGSGRAKI 961
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Match: A0A6H5JSI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI8_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 2.250e-16 Identity = 58/196 (29.59%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 352 NLWSLRLGQVESAAKSIVHRLEEEEGPVSGARTTTSTMSAEDWQHVDNMIGKGAFGEVYLVDHCGVNAAAKVINVPW-TGDHELHKQQQVIAKECSTIKNLQG-----SEHVVTLLDDTVHDKKQFIVFTKFLPGGDLRTSLNVAKEAGFMEEKLQKSVIMDVVAGMKHIHANHVIHGDLKSPNVMMDSHGRAKVS 921 +L+ L L + S + + R++ + + + AE D ++GKG FGEVYL D+ G NAAAKV+ + G + +++Q+ + + ++ L+ S + V + + ++ + L GGDL T L +K+A + E+ + +I D+ GM +H+ + +HGDLKS NV++D GRAK++ Sbjct: 583 DLYQLSLSEAASESVAKARRIKRQR------KLDRVEIPAEYLSITDELLGKGGFGEVYLADYNGHNAAAKVLYIAHDVGALDENQKQRETRERRAFLRELEAMIRLRSLNTVNVFGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKA--LPEEQSRLIIRDICTGMAFLHSKNTVHGDLKSANVLLDDIGRAKIA 770
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 2.430e-16 Identity = 51/143 (35.66%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 490 DNMIGKGAFGEVYLVDHCGVNAAAKVINVPWTGDHELHKQQQVIAKECSTIKNLQGSEHVVTLLDDTVHDKKQFIVFTKFLPGGDLRTSLNVAKEAGFMEEKLQKSVIMDVVAGMKHIHANHVIHGDLKSPNVMMDSHGRAKV 918 + M+G+G FGEVYL D+ G NAAAKV Q++ +E + L+ H V + + I+ + LPGGDLRT L +++ + E+ + +I D+ AGM +H+ +HGDLKS N+++D+ GRAK+ Sbjct: 901 EEMLGRGGFGEVYLADYNGHNAAAKV---------GKKIQRKAFLRELDAMIRLRHP-HTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQP--LPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKI 1031
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Match: D7FL77_ECTSI (Protein tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL77_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 2.460e-15 Identity = 48/147 (32.65%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 499 IGKGAFGEVYLVDHCGVNAAAKVINVPWT-GDHELHKQQQVIAKECSTIKNLQG-----SEHVVTLLDDTVHDKKQFIVFTKFLPGGDLRTSLNVAKEAGFMEEKLQKSVIMDVVAGMKHIHANHVIHGDLKSPNVMMDSHGRAKVS 921 +GKG FGEVYL D+ G NAAAKV+ + G + ++QQ+ ++ + ++ L+ S + V + + ++ + +PGGDL+T L ++E + E+ + ++ D+ GM + + +HGDLKS NV +D GRAK + Sbjct: 176 LGKGGFGEVYLADYNGHNAAAKVLRITHDLGAFDENQQQRETSQRRAFLRELEAMIRLRSPNTVNVYGAVTSLPDRVVLVMELMPGGDLQTILTSSQEP--LPEEQSRRIVRDICTGMAFLQSRKTVHGDLKSANVFLDGSGRAKAT 320
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Match: D8LAU2_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU2_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 8.760e-15 Identity = 55/161 (34.16%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 490 DNMIGKGAFGEVYLVDHCGVNAAAKVINVPWTGD--HELHKQQQVIAKECSTIKNLQG----------------SEHVVTLLDDTVHDKKQFIVFTKFLPGGDLRTSLNVAKEAGFMEEKLQKSVIMDVVAGMKHIHANHVIHGDLKSPNVMMDSHGRAKV 918 D+++G+G FGEV+L D+ G NAA KV++V E+++ Q +A S + Q S H V + + I+ + L GGDLRT L+ + F EE+ ++ +I DV +GM +H+ +HGDLKS NV++D GRAK+ Sbjct: 101 DDLLGRGGFGEVFLADYNGRNAACKVVHVAHDQGALREIYELGQSVASSHSKTQREQNQRRAFLRELEAMIRLQSPHTVNVYGAVTCLPDRLILVMELLSGGDLRTLLSSCDQP-FPEEQSRR-IIGDVCSGMAFLHSKDTVHGDLKSANVLLDGAGRAKI 259
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 1.130e-14 Identity = 49/148 (33.11%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 493 NMIGKGAFGEVYLVDHCGVNAAAKVINVPWT-GDHELHKQQQVIAKECSTIKNLQG-----SEHVVTLLDDTVHDKKQFIVFTKFLPGGDLRTSLNVAKEAGFMEEKLQKSVIMDVVAGMKHIHANHVIHGDLKSPNVMMDSHGRAKV 918 +++GKG FGEVYL D+ G NAAAKV+ + G + +++Q+ + ++ L+ S + V + + ++ + LP GDL T L + + E+ + +I D+ AGM +H + +HGDLKS NV++D GRAK+ Sbjct: 802 DLLGKGGFGEVYLADYNGHNAAAKVLYIAHDLGALDENQKQRETRQRKGFLRELEAMIRLRSPNTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLR--RSTNPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKI 947
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 1.540e-14 Identity = 49/148 (33.11%), Postives = 83/148 (56.08%), Query Frame = 1 Query: 493 NMIGKGAFGEVYLVDHCGVNAAAKVINVPWT-GDHELHKQQQVIAKECSTIKNLQG-----SEHVVTLLDDTVHDKKQFIVFTKFLPGGDLRTSLNVAKEAGFMEEKLQKSVIMDVVAGMKHIHANHVIHGDLKSPNVMMDSHGRAKV 918 +++GKG FGEVYL D+ G NAAAKV+ + G + +++Q+ + ++ L+ S + V + + ++ + LP GDL T L + + + E+ + +I D+ AGM +H + +HGDLKS NV++D GRAK+ Sbjct: 827 DLLGKGGFGEVYLADYNGHNAAAKVLYIAHDLGALDENQKQRETRQRKGFLRELEAMIRLRSPNTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTKP--LPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKI 972 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7821.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7821.1.1 >prot_C-tenellus_contig7821.1.1 ID=prot_C-tenellus_contig7821.1.1|Name=mRNA_C-tenellus_contig7821.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=233bp MASNMTLPSRLIFSDPCALQLSQYYHRTGKWDNMERSNLWSLRLGQVESAback to top mRNA from alignment at C-tenellus_contig7821:842..2421+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7821.1.1 ID=mRNA_C-tenellus_contig7821.1.1|Name=mRNA_C-tenellus_contig7821.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1580bp|location=Sequence derived from alignment at C-tenellus_contig7821:842..2421+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7821:842..2421+ >mRNA_C-tenellus_contig7821.1.1 ID=mRNA_C-tenellus_contig7821.1.1|Name=mRNA_C-tenellus_contig7821.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=699bp|location=Sequence derived from alignment at C-tenellus_contig7821:842..2421+ (Choristocarpus tenellus KU2346)back to top |