prot_C-tenellus_contig7808.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7808.1.1
Unique Nameprot_C-tenellus_contig7808.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length164
Homology
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BLAST of mRNA_C-tenellus_contig7808.1.1 vs. uniprot
Match: D7FLL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL9_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.840e-21
Identity = 57/126 (45.24%), Postives = 74/126 (58.73%), Query Frame = 0 
Query:    1 MMHRTQAVKGYPESRSWPRGVDGGAWGPQHLSPIPSRGDFQPLIPSPTTSPGRQCRRLPHSKKFPQEXXXXXXXXXXXXXXXXLASAATVGSGADIAAELSLLGLDCPELLNPF--VALELDEVRP 124
            M H+TQAV+G+P +R+WPRG DGGAWGPQHLSPIPS   + PL+PSPTTSPGR+ R       FP E                +A A  V     +AAE+   GL+  E L PF  + L+ +++ P
Sbjct:   59 MRHKTQAVQGHPGARAWPRGPDGGAWGPQHLSPIPSEKGYMPLVPSPTTSPGRRSRTGGRDATFPGEGCPTD-----------VAEAFAVAEA--VAAEVGFEGLE-REALRPFEPIVLQNEQLPP 170
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BLAST of mRNA_C-tenellus_contig7808.1.1 vs. uniprot
Match: A0A6H5J7Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Z0_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 5.720e-13
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 0 
Query:    1 MMHRTQAVKGYPESRSWPRGVDGGAWGPQHLSPIPSRGDFQPLIPSPTTSP 51
            M HRTQAV+G+P++R+WPRG DGGAWGPQHLSPIPS   + PL   P   P
Sbjct:   59 MRHRTQAVQGHPDARAWPRGPDGGAWGPQHLSPIPSEKGYMPLEKLPPAPP 109
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7808.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLL9_ECTSI2.840e-2145.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7Z0_9PHAE5.720e-1364.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7808contigC-tenellus_contig7808:4170..5201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7808.1.1mRNA_C-tenellus_contig7808.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7808 3335..5429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7808.1.1 ID=prot_C-tenellus_contig7808.1.1|Name=mRNA_C-tenellus_contig7808.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=164bp
MMHRTQAVKGYPESRSWPRGVDGGAWGPQHLSPIPSRGDFQPLIPSPTTS
PGRQCRRLPHSKKFPQEEEEEEEEEAFPPSTVVLASAATVGSGADIAAEL
SLLGLDCPELLNPFVALELDEVRPFAWPYFVCACILLRCEGSGGYEYQQS
WGVDAMYYGVLWA*
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