prot_C-tenellus_contig776.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig776.1.1
Unique Nameprot_C-tenellus_contig776.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length89
Homology
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 132 bits (332), Expect = 7.010e-38
Identity = 66/88 (75.00%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    1 MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRVTIAQGGVLPNIHAILLPKHRHKSGEDDKKATPSGSQDY 88
            MAA++EYLCAEVLELSGNAARDNKK RI PRHIQLAVRNDEELNKLLG+VTIA GGVLPNIHA+LLPK      +  + +T S SQ+Y
Sbjct:   53 MAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKSKAAEASTASASQEY 140          
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Match: A0A7S2CIK1_9STRA (Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIK1_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.030e-36
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    1 MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRVTIAQGGVLPNIHAILLPKHRHKSGEDDKKATPSGSQDY 88
            +AA+LEYLCAE+LEL+GNAARDNKK RITPRHIQLAVRNDEELNKLLG VTI+ GGVLPNIHA+LLPK   K+    K A  S SQDY
Sbjct:   53 LAAVLEYLCAEILELAGNAARDNKKTRITPRHIQLAVRNDEELNKLLGNVTISSGGVLPNIHAVLLPKKTGKA----KLAKGSASQDY 136          
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Match: W2KLB7_PHYPR (Histone H2A n=7 Tax=Phytophthora TaxID=4783 RepID=W2KLB7_PHYPR)

HSP 1 Score: 127 bits (319), Expect = 1.290e-36
Identity = 65/88 (73.86%), Postives = 73/88 (82.95%), Query Frame = 0
Query:    1 MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRVTIAQGGVLPNIHAILLPKHRHKSGEDDKKATPSGSQDY 88
            MAA+LEYLCAE+LEL+GNAARD+KK RI PRHIQ+AVRNDEELNKLLG VTIA GGV+PNIH++LLPK   KS    KK   S SQDY
Sbjct:    1 MAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPK---KSASAGKKGKSSASQDY 85          
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Match: A0A484EDX4_BRELC (Histone H2A n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDX4_BRELC)

HSP 1 Score: 126 bits (316), Expect = 3.820e-36
Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 0
Query:    1 MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRVTIAQGGVLPNIHAILLPKHRHKSGEDDKKATPSGSQDY 88
            MAA+LEYLCAE+LEL+GNAARD+KK RI PRHIQ+AVRNDEELNKLLG VTIA GGV+PNIH++LLPK    +G   KK   S SQDY
Sbjct:    1 MAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPKKSASTGP--KKGKSSASQDY 86          
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Match: A0A0W8DCN3_PHYNI (Histone H2A n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DCN3_PHYNI)

HSP 1 Score: 127 bits (319), Expect = 6.450e-36
Identity = 65/88 (73.86%), Postives = 73/88 (82.95%), Query Frame = 0
Query:    1 MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRVTIAQGGVLPNIHAILLPKHRHKSGEDDKKATPSGSQDY 88
            MAA+LEYLCAE+LEL+GNAARD+KK RI PRHIQ+AVRNDEELNKLLG VTIA GGV+PNIH++LLPK   KS    KK   S SQDY
Sbjct:   55 MAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPK---KSASAGKKGKSSASQDY 139          
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Match: A0A0W8DCQ0_PHYNI (Histone H2A n=10 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DCQ0_PHYNI)

HSP 1 Score: 127 bits (319), Expect = 6.650e-36
Identity = 65/88 (73.86%), Postives = 73/88 (82.95%), Query Frame = 0
Query:    1 MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRVTIAQGGVLPNIHAILLPKHRHKSGEDDKKATPSGSQDY 88
            MAA+LEYLCAE+LEL+GNAARD+KK RI PRHIQ+AVRNDEELNKLLG VTIA GGV+PNIH++LLPK   KS    KK   S SQDY
Sbjct:   56 MAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPK---KSASAGKKGKSSASQDY 140          
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Match: H3GAL3_PHYRM (Histone H2A n=22 Tax=Oomycota TaxID=4762 RepID=H3GAL3_PHYRM)

HSP 1 Score: 127 bits (319), Expect = 6.650e-36
Identity = 65/88 (73.86%), Postives = 73/88 (82.95%), Query Frame = 0
Query:    1 MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRVTIAQGGVLPNIHAILLPKHRHKSGEDDKKATPSGSQDY 88
            MAA+LEYLCAE+LEL+GNAARD+KK RI PRHIQ+AVRNDEELNKLLG VTIA GGV+PNIH++LLPK   KS    KK   S SQDY
Sbjct:   56 MAAVLEYLCAEILELAGNAARDHKKTRIIPRHIQMAVRNDEELNKLLGDVTIASGGVMPNIHSVLLPK---KSASAGKKGKASASQDY 140          
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Match: A0A6G0X3A7_9STRA (Histone H2A n=29 Tax=Saprolegniaceae TaxID=4764 RepID=A0A6G0X3A7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 7.270e-36
Identity = 65/90 (72.22%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    1 MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRVTIAQGGVLPNIHAILLPKHRHKS--GEDDKKATPSGSQDY 88
            +AA+LEYLCAE+LEL+GNAARDNKK RI PRHIQLAVRNDEELNKLLG VTIA GGVLPNIH +LLPK    +   ++ KK   S SQDY
Sbjct:   54 LAAVLEYLCAEILELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHNVLLPKKSSSATTSKEGKKGKESASQDY 143          
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 8.140e-36
Identity = 67/88 (76.14%), Postives = 73/88 (82.95%), Query Frame = 0
Query:    1 MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRVTIAQGGVLPNIHAILLPKHRHKSGEDDKKATPSGSQDY 88
            +AA+LEYL AEVLEL+GNAARDNKK RI PRHIQLAVRNDEELNKLLG VTIA GGVLPNIHA+LLPK     G+   KA+ S SQDY
Sbjct:   50 LAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGGK--AKASASASQDY 135          
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.720e-35
Identity = 68/88 (77.27%), Postives = 73/88 (82.95%), Query Frame = 0
Query:    1 MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRVTIAQGGVLPNIHAILLPKHRHKSGEDDKKATPSGSQDY 88
            +AA+LEYL AEVLEL+GNAARDNKK RI PRHIQLAVRNDEELNKLLG VTIA GGVLPNIHA+LLPK   KS     KA+ S SQDY
Sbjct:  101 LAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK---KSSVGKAKASASASQDY 185          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig776.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZLE9_9STRA7.010e-3875.00Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S2CIK1_9STRA1.030e-3676.14Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687... [more]
W2KLB7_PHYPR1.290e-3673.86Histone H2A n=7 Tax=Phytophthora TaxID=4783 RepID=... [more]
A0A484EDX4_BRELC3.820e-3672.73Histone H2A n=2 Tax=Bremia lactucae TaxID=4779 Rep... [more]
A0A0W8DCN3_PHYNI6.450e-3673.86Histone H2A n=4 Tax=Phytophthora TaxID=4783 RepID=... [more]
A0A0W8DCQ0_PHYNI6.650e-3673.86Histone H2A n=10 Tax=Peronosporaceae TaxID=4777 Re... [more]
H3GAL3_PHYRM6.650e-3673.86Histone H2A n=22 Tax=Oomycota TaxID=4762 RepID=H3G... [more]
A0A6G0X3A7_9STRA7.270e-3672.22Histone H2A n=29 Tax=Saprolegniaceae TaxID=4764 Re... [more]
A0A6H5KG79_9PHAE8.140e-3676.14Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI1.720e-3577.27Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 7..20
score: 80.34
coord: 21..35
score: 75.43
coord: 49..67
score: 74.99
IPR002119Histone H2ASMARTSM00414h2a4coord: 1..72
e-value: 2.2E-27
score: 107.0
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 41..73
e-value: 4.4E-19
score: 67.9
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..79
e-value: 7.7E-39
score: 134.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 1..73
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..38
e-value: 8.8E-9
score: 35.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..88
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..78
NoneNo IPR availablePANTHERPTHR23430:SF20CORE HISTONE MACRO-H2A.1coord: 1..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig776contigC-tenellus_contig776:9864..14809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig776.1.1mRNA_C-tenellus_contig776.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig776 8945..14855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig776.1.1 ID=prot_C-tenellus_contig776.1.1|Name=mRNA_C-tenellus_contig776.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=89bp
MAAILEYLCAEVLELSGNAARDNKKRRITPRHIQLAVRNDEELNKLLGRV
TIAQGGVLPNIHAILLPKHRHKSGEDDKKATPSGSQDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3