prot_C-tenellus_contig7721.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7721.2.1
Unique Nameprot_C-tenellus_contig7721.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length152
Homology
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 2.330e-63
Identity = 96/144 (66.67%), Postives = 110/144 (76.39%), Query Frame = 0
Query:    9 LLRQCVTVVLENASPHKVSSWCGWLLALGEPSATMEALRAKRGNSSSRICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFHRTALGGCCDCGDEEAWAESGCCPRHRPKKGGPMGVAGGNYANPVEALPESLQ 152
            LLRQCV VVL +A P  + +WC WL  LGEP  T+ +LR   G S  R+CGYVF+RGDIAWNCR+CQ+DSTCVQCD+CFRRSDHTGHPVYFHRTA GGCCDCGDEEAWAE GCC RHRP++G      GG   +P+ ALP   Q
Sbjct:   44 LLRQCVMVVLAHAHPSSLPTWCSWLCCLGEPETTLRSLREMSGGS--RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEEGCCSRHRPRRGD---QGGGGAGDPLAALPTDFQ 182          
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Match: A0A7S4V6U6_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V6U6_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.010e-39
Identity = 56/75 (74.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query:   54 SSRICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFHRTALGGCCDCGDEEAWAESGCCPRHRPK 128
            + R CGYVFRRGDIAWNCR CQ DSTCV CD CF  SDH GH V+FHRT+ GGCCDCGD EAW   GCCPRHRP+
Sbjct:   42 TGRPCGYVFRRGDIAWNCRTCQTDSTCVLCDRCFHESDHEGHEVFFHRTSPGGCCDCGDIEAWKIEGCCPRHRPR 116          
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Match: A0A7S4EF35_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EF35_9STRA)

HSP 1 Score: 139 bits (351), Expect = 2.720e-39
Identity = 56/72 (77.78%), Postives = 58/72 (80.56%), Query Frame = 0
Query:   56 RICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFHRTALGGCCDCGDEEAWAESGCCPRHRP 127
            R CGYVF+RGDIAWNCR CQ DSTCV CD+CFR SDH GH VYFHRT  GGCCDCGD EAW   GCCP HRP
Sbjct:   27 RPCGYVFKRGDIAWNCRTCQTDSTCVICDTCFRSSDHEGHEVYFHRTTPGGCCDCGDAEAWKPEGCCPAHRP 98          
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Match: K8YNA8_NANGC (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNA8_NANGC)

HSP 1 Score: 136 bits (342), Expect = 1.220e-37
Identity = 65/159 (40.88%), Postives = 83/159 (52.20%), Query Frame = 0
Query:    8 ALLRQCVTVVLENASPHKVSSWCGWLLAL-------GEPSATMEALRAKRGNSSSR-------ICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFHRTALGGCCDCGDEEAWAESGCCPRHRPKKGGPMGVAGGNYANPVEALPESLQ 152
            ALLR+C   V       K++ W    L +        EP+ +        G   S        +CGY F+RGD+ WNCR CQ D TCVQCD CFR SDH GH VYFH+ + GGCCDCGD EAW  +GCC  H              + +PV++LP S++
Sbjct:    9 ALLRECARQVFRRGPVDKLADWGDHFLCVEVGPRKDAEPTGSGSGREIDTGRLKSLHLTAQRGVCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPGGCCDCGDLEAWDRAGCCTAHSGSD---------PFQDPVDSLPTSMR 158          
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Match: A0A7S3P848_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P848_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.220e-37
Identity = 59/97 (60.82%), Postives = 66/97 (68.04%), Query Frame = 0
Query:   56 RICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFHRTALGGCCDCGDEEAWAESGCCPRHRPKKGGPMGVAGGNYANPVEALPESLQ 152
            R CGYVF+RGDIAWNCR CQ D TCV CD CFRRSDH GH VYFHRT  GGCCDCGD EAW   GCC  HRP     +  +G +    V+A  + L+
Sbjct:   51 RPCGYVFQRGDIAWNCRTCQTDPTCVICDDCFRRSDHQGHEVYFHRTTPGGCCDCGDMEAWKIDGCCDVHRPDTTQVVQPSGDDPMEAVKAAQQGLK 147          
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Match: A0A7R9YGT1_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGT1_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.880e-37
Identity = 69/149 (46.31%), Postives = 88/149 (59.06%), Query Frame = 0
Query:    8 ALLRQCVTVVLENASPHKVSSWCGWLLALGEPSATMEALRAKRGNSSSRICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFHRTALGGCCDCGDEEAWAESGCCPRHRPKKG----GPMGVAGGNYANPVEALPESLQ 152
            AL+++    VL  A   +VS W    LA          L +    +  R CGYVFR GDI WNCR C+ DSTCVQCD+CF+ SDHTGH V+FH+ +  GCCDCGDEEAWA  GCCPRHR ++      P+ V    +A    A+ E+ +
Sbjct:   45 ALVKRATRAVLRAADASEVSLWLKSFLAFAFD-GDARRLESLEDANPKRYCGYVFREGDICWNCRTCEKDSTCVQCDACFQLSDHTGHDVFFHKASPNGCCDCGDEEAWAWEGCCPRHRRRENEELRDPLEVLDPFFAKSARAVVEAAR 192          
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Match: A0A7S2LKQ2_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LKQ2_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.100e-37
Identity = 53/75 (70.67%), Postives = 61/75 (81.33%), Query Frame = 0
Query:   53 SSSRICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFHRTALGGCCDCGDEEAWAESGCCPRHRP 127
            ++ R CGYVF+RGD+AWNCR CQ DSTCV CD+CF+ SDHTGH V FH+T+ GGCCDCGD EAWA  GCC  HRP
Sbjct:   32 TTPRPCGYVFKRGDMAWNCRTCQTDSTCVLCDACFQASDHTGHEVSFHQTSPGGCCDCGDVEAWAAKGCCDLHRP 106          
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Match: A0A7S3XNE3_HETAK (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNE3_HETAK)

HSP 1 Score: 132 bits (333), Expect = 8.490e-37
Identity = 60/111 (54.05%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    9 LLRQCVTVVLENASPHKVSSWCGWLLAL--GEPSATMEA-LRAKRGNSSSRICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFHRTALGGCCDCGDEEAW 116
            LL      VL +  P ++ S+  WLL    G+  A   A LR     +++R+CGYVF+RGDIAWNCR CQ D TCVQCD+C+R +DH GH V FHRT  GGCCDCGD EAW
Sbjct:   43 LLLSAARAVLNHCDPPQIDSYLSWLLVARWGDEEAPDPARLRGLANANAARVCGYVFQRGDIAWNCRDCQKDPTCVQCDACYRAADHRGHAVTFHRTGPGGCCDCGDAEAW 153          
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Match: A0A6S8VUG7_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8VUG7_9STRA)

HSP 1 Score: 141 bits (355), Expect = 5.830e-36
Identity = 57/74 (77.03%), Postives = 60/74 (81.08%), Query Frame = 0
Query:   56 RICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFHRTALGGCCDCGDEEAWAESGCCPRHRPKK 129
            R CGYVFRRGDIAWNCR CQ DSTCV CD+CF  SDH GH VYFHRT+ GGCCDCGD EAW   GCCP HRPK+
Sbjct:  216 RPCGYVFRRGDIAWNCRTCQYDSTCVLCDACFHASDHEGHEVYFHRTSPGGCCDCGDSEAWRIEGCCPLHRPKE 289          
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Match: A0A7S1Z3G4_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3G4_9STRA)

HSP 1 Score: 140 bits (352), Expect = 6.560e-36
Identity = 56/75 (74.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query:   54 SSRICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFHRTALGGCCDCGDEEAWAESGCCPRHRPK 128
            + R CGYVFRRGDIAWNCR CQ DSTCV CD CF  SDH GH V+FHRT+ GGCCDCGD EAW   GCCPRHRP+
Sbjct:  287 TGRPCGYVFRRGDIAWNCRTCQTDSTCVLCDRCFHESDHEGHEVFFHRTSPGGCCDCGDIEAWKVEGCCPRHRPR 361          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7721.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3D3_ECTSI2.330e-6366.67E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A7S4V6U6_9STRA1.010e-3974.67E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dit... [more]
A0A7S4EF35_9STRA2.720e-3977.78E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pse... [more]
K8YNA8_NANGC1.220e-3740.88E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nan... [more]
A0A7S3P848_9STRA1.220e-3760.82E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amp... [more]
A0A7R9YGT1_9STRA1.880e-3746.31E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pin... [more]
A0A7S2LKQ2_9STRA4.100e-3770.67E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Lep... [more]
A0A7S3XNE3_HETAK8.490e-3754.05E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Het... [more]
A0A6S8VUG7_9STRA5.830e-3677.03E3 ubiquitin-protein ligase n=1 Tax=Chaetoceros de... [more]
A0A7S1Z3G4_9STRA6.560e-3674.67E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 56..126
e-value: 7.7E-18
score: 75.3
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 58..125
e-value: 7.9E-17
score: 61.2
IPR003126Zinc finger, UBR-typePROSITEPS51157ZF_UBRcoord: 56..127
score: 10.002
NoneNo IPR availableGENE3D2.10.110.30coord: 58..126
e-value: 2.3E-21
score: 77.5
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 25..151
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 25..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7721contigC-tenellus_contig7721:4874..6629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7721.2.1mRNA_C-tenellus_contig7721.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7721 4777..6629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7721.2.1 ID=prot_C-tenellus_contig7721.2.1|Name=mRNA_C-tenellus_contig7721.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=152bp
MALQANYALLRQCVTVVLENASPHKVSSWCGWLLALGEPSATMEALRAKR
GNSSSRICGYVFRRGDIAWNCRRCQMDSTCVQCDSCFRRSDHTGHPVYFH
RTALGGCCDCGDEEAWAESGCCPRHRPKKGGPMGVAGGNYANPVEALPES
LQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003126Znf_UBR
IPR039164UBR1-like