mRNA_C-tenellus_contig7719.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7719.2.1
Unique NamemRNA_C-tenellus_contig7719.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Match: D8LEK3_ECTSI (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEK3_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 3.300e-140
Identity = 216/264 (81.82%), Postives = 233/264 (88.26%), Query Frame = 1
Query:    1 LKVHTYRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGSGVASQEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERAPPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEEMLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQSLGAEHSQ 792
            L+V TYRF GHSPADPEHERGRK+EK+WARA QDP++I+E  AL  G+ ++EELD  KK  G  VK AV FADASPPPP++LAKELEYPD P TDYN +APPA A+ +N RSLP  SRAEA  HCAMLEGK   G+ITIGDAINLAILEEMLRDP TTIHAEDLQAGSSYDIPKKLQ+VFG LRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMP+TIIGAGGTAPNQSLGAEHSQ
Sbjct:  341 LQVQTYRFSGHSPADPEHERGRKQEKRWARATQDPLAIYESEALEFGI-TKEELDAAKKRAGVTVKAAVEFADASPPPPASLAKELEYPDLPSTDYNLKAPPANAEEVNARSLPPHSRAEAEAHCAMLEGKANKGQITIGDAINLAILEEMLRDPMTTIHAEDLQAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPMTIIGAGGTAPNQSLGAEHSQ 603          
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Match: A0A836C8J1_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J1_9STRA)

HSP 1 Score: 375 bits (964), Expect = 7.060e-123
Identity = 191/264 (72.35%), Postives = 215/264 (81.44%), Query Frame = 1
Query:    1 LKVHTYRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGSGVASQEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERAPPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEEMLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQSLGAEHSQ 792
            ++VHTYRF GHSPADPEHERGRK+EK+WARAE DPI++FEKR    G+A+ EEL  +      +VK +V F+ ASPPPP +LAKELEYPDAP+TDYN R  PA +  I  R++   +   A  H   L  K  AG+ITIGDAINLA+LEEM+RDP TTIHAEDLQAGSSYDIPK  QQ FG LRAADEIIDEGH IGKALGEGMNGYRPIVELMNTNFGIYGMAE+SSAGNTYATTGGQF MP+TIIGAGGT+PNQSLGAEHSQ
Sbjct:  269 MQVHTYRFNGHSPADPEHERGRKDEKRWARAEMDPIALFEKRCATEGIATAEELKAVSDRAKAEVKASVDFSLASPPPPRSLAKELEYPDAPDTDYNSRMAPADSAEITGRTVDHTALKNAELHMEALRAKASAGQITIGDAINLAVLEEMVRDPTTTIHAEDLQAGSSYDIPKLTQQTFGKLRAADEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFIMPMTIIGAGGTSPNQSLGAEHSQ 532          
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Match: K0RIS8_THAOC (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RIS8_THAOC)

HSP 1 Score: 378 bits (971), Expect = 9.700e-123
Identity = 192/264 (72.73%), Postives = 215/264 (81.44%), Query Frame = 1
Query:    1 LKVHTYRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGSGVASQEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERAPPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEEMLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQSLGAEHSQ 792
            L+VHTYRF GHSPADPEHERGRK+EK WAR++QDPI  FE +   +GV +++EL   KK +  +VK AV FAD SP PP  LAKELEYPDAP+TDYN+R  P  AD +N R++     A    H   L  K KAG+I+IGDAINLAI EEMLRDP TTIHAEDLQAGSSYDIPK  QQ +G +RAADEIIDEGH IGKALGEGMNGYRPIVELMNTNFGI+GMAELSSAGNTYATTGGQFDMP+TI+GAGGTAPNQSLGAEHSQ
Sbjct:  383 LQVHTYRFNGHSPADPEHERGRKDEKAWARSDQDPIKKFEDKYTANGVFTEDELKAAKKEILAEVKAAVKFADESPMPPVELAKELEYPDAPDTDYNQRPAPTYADAVNKRTISDEQMATVTAHIDALREKAKAGDISIGDAINLAIHEEMLRDPATTIHAEDLQAGSSYDIPKLTQQTYGQIRAADEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIFGMAELSSAGNTYATTGGQFDMPMTIVGAGGTAPNQSLGAEHSQ 646          
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Match: A0A7S2M045_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M045_9STRA)

HSP 1 Score: 368 bits (945), Expect = 1.080e-122
Identity = 190/264 (71.97%), Postives = 212/264 (80.30%), Query Frame = 1
Query:    1 LKVHTYRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGSGVASQEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERAPPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEEMLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQSLGAEHSQ 792
            L+VHTYRF GHSPADPEHERGRK+EK WARAEQDPI  FE +   +GV +++EL   KK +  +VK AV FAD S  PP  LAKELEYPDAP+TDYN +  PA AD +N R++          H A L  K  AG+I+IGDAINLAI EEMLRDP TTIHAEDLQAGSSYDIPK  QQ +G  RAADEIIDEGH IGKALGEGMNGYRPIVELMNTNFGI+GMAE+SSAGNTYATTGGQFDMP+TI+GAGGTAPNQ+LGAEHSQ
Sbjct:  230 LQVHTYRFNGHSPADPEHERGRKDEKAWARAEQDPIKKFEDKYTANGVFTEDELKEFKKEVLAEVKAAVKFADESDMPPVELAKELEYPDAPDTDYNLKPAPAFADAVNARTISPEQMETVQAHIAGLREKAIAGDISIGDAINLAIHEEMLRDPTTTIHAEDLQAGSSYDIPKLTQQTYGKTRAADEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIFGMAEISSAGNTYATTGGQFDMPMTIVGAGGTAPNQALGAEHSQ 493          
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Match: A0A7S2KFC8_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFC8_9STRA)

HSP 1 Score: 377 bits (967), Expect = 1.680e-122
Identity = 192/264 (72.73%), Postives = 215/264 (81.44%), Query Frame = 1
Query:    1 LKVHTYRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGSGVASQEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERAPPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEEMLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQSLGAEHSQ 792
            ++VHTYRF GHSPADPEHERGRK EKKWAR EQDP+  FE + + +G  +++EL   +K +  +VK AV FAD SP PP  LAKELEYPDAP+TDYN +  PA AD +N R++ A       +H A L  K  AGEITIGDAINLAI EEMLRDP TTIHAEDLQAGSSYDIPK  QQ +G +RAADEIIDEGH IGKALGEGMNGYRPIVELMNTNFGIYGMAE+SSAGNT+ATTGGQFDMP+TIIGAGGTAPNQSLGAEHSQ
Sbjct:  344 MQVHTYRFNGHSPADPEHERGRKGEKKWARDEQDPLKFFENKFIENGTFTEDELKAARKEVLAEVKAAVKFADESPMPPVELAKELEYPDAPDTDYNLKPAPAFADEVNARTISADQMKTIHNHIATLREKASAGEITIGDAINLAIHEEMLRDPTTTIHAEDLQAGSSYDIPKLTQQTYGQIRAADEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTFATTGGQFDMPMTIIGAGGTAPNQSLGAEHSQ 607          
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Match: A0A7S4UV86_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UV86_9STRA)

HSP 1 Score: 377 bits (967), Expect = 1.950e-122
Identity = 193/264 (73.11%), Postives = 215/264 (81.44%), Query Frame = 1
Query:    1 LKVHTYRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGSGVASQEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERAPPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEEMLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQSLGAEHSQ 792
            L+VHTYRF GHSPADPEHERGRKEEK WARAEQDPI  FE   +  GV + EEL   +K +  +VK +V FAD SP PP +LAKELEYPDA +TDYN + PPA AD +N R++     A    H   L+ K +AG+I+IGDAINLAI EEMLRDP TTIHAEDLQAGSSYDIPK  QQ +G +RAADEIIDEGH IGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNT+ATTGGQFDMP+TIIGAGGTAPNQ+LGAEHSQ
Sbjct:  350 LQVHTYRFNGHSPADPEHERGRKEEKMWARAEQDPIKKFEATYIEKGVFTAEELKAARKEVLAEVKASVKFADESPMPPESLAKELEYPDAVDTDYNLKTPPAFADEVNARTISPEQMATITTHIEALQEKARAGDISIGDAINLAIHEEMLRDPTTTIHAEDLQAGSSYDIPKLTQQTYGQIRAADEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTFATTGGQFDMPMTIIGAGGTAPNQALGAEHSQ 613          
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Match: A0A448ZRI2_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZRI2_9STRA)

HSP 1 Score: 374 bits (960), Expect = 1.910e-121
Identity = 194/264 (73.48%), Postives = 216/264 (81.82%), Query Frame = 1
Query:    1 LKVHTYRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGSGVASQEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERAPPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEEMLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQSLGAEHSQ 792
            L+VHTYRF GHSPADPEHERGRK+EK WAR EQDP+  FE +  GS V +++EL   KK +  +VKEAV FAD SP PP  LAKELE+PDAP+TDYN R  PA AD +N R++         DH A L  K +AG+I+IGDAINLAI EEMLRDP TTIHAEDLQAGSSYDIPK  QQ +G +RAADEIIDEGH IGKALGEG+NGYRPIVELMNTNFGIYGMAELSSAGNTYATTGG+FDMP+TIIGAGGTAPNQSLGAEHSQ
Sbjct:  346 LQVHTYRFNGHSPADPEHERGRKDEKAWARQEQDPLKSFEAKYTGS-VFTEDELKDAKKEIMAQVKEAVKFADDSPMPPVELAKELEFPDAPDTDYNLREGPAFADEVNARTISPEKMQNVQDHIASLVAKAEAGDISIGDAINLAIHEEMLRDPSTTIHAEDLQAGSSYDIPKLTQQTYGQMRAADEIIDEGHFIGKALGEGLNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGKFDMPMTIIGAGGTAPNQSLGAEHSQ 608          
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Match: A0A7S1USZ6_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USZ6_9STRA)

HSP 1 Score: 361 bits (927), Expect = 1.060e-120
Identity = 190/260 (73.08%), Postives = 210/260 (80.77%), Query Frame = 1
Query:   16 YRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGS-GVASQEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERAPPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEEMLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQSLGAEHSQ 792
            YRF G  PADPEHERGRK+EK WARAEQDPI  FE   +   GV +++EL   +K +  +VKEAVAFAD SP PP  LAKELEYPDA   DYN RA PA A+ +NDR L    ++  VDH   L+ K KAGEI+IGDAINLAI EEM+RDP TTIHAEDLQAGSSYDIPK  QQ +G +RAADEIIDEGH IGKALGE MNGYRP+VELMNTNFGIYGMAELSSAGNTYATTGGQFDMP+TIIGAGGTAPNQ+LGAEHSQ
Sbjct:    2 YRFNGPPPADPEHERGRKDEKAWARAEQDPIKAFEATYVAEKGVFTEDELKAARKEILGEVKEAVAFADKSPMPPVELAKELEYPDAASFDYNTRAGPAWANEVNDRILSPEQKSVIVDHMNALQEKAKAGEISIGDAINLAIHEEMMRDPTTTIHAEDLQAGSSYDIPKLTQQTYGQIRAADEIIDEGHFIGKALGEAMNGYRPVVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPMTIIGAGGTAPNQALGAEHSQ 261          
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Match: A0A7S2U5Q1_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5Q1_9STRA)

HSP 1 Score: 373 bits (957), Expect = 1.230e-120
Identity = 190/264 (71.97%), Postives = 214/264 (81.06%), Query Frame = 1
Query:    1 LKVHTYRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGSGVASQEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERAPPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEEMLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQSLGAEHSQ 792
            L+VHTYRF GHSPADPEHERGRK+EK WAR  QDPI  FE + +GSGV S++EL   +K +   VK+AV FA+ SP PP  LAK+LEYPDA +TDYN +  P  AD +N R++     +   DH   L+ K +AGEI+IGDAINLAI EEMLRDP TTIHAEDLQAGSSYDIPK  QQ +G +RAADEIIDEGH IGKALGE MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMP+TIIGAGGTAPNQ+LGAEHSQ
Sbjct:  380 LQVHTYRFNGHSPADPEHERGRKDEKAWARISQDPIKQFEDKYMGSGVFSEDELKAARKEILADVKQAVKFAEESPMPPMELAKQLEYPDAADTDYNAKKAPDYADDVNARTISPEQMSVVKDHILALQEKARAGEISIGDAINLAIHEEMLRDPTTTIHAEDLQAGSSYDIPKLTQQTYGQIRAADEIIDEGHFIGKALGEAMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPMTIIGAGGTAPNQALGAEHSQ 643          
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Match: L1J1I5_GUITC (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J1I5_GUITC)

HSP 1 Score: 370 bits (950), Expect = 1.400e-120
Identity = 190/264 (71.97%), Postives = 212/264 (80.30%), Query Frame = 1
Query:    1 LKVHTYRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGSGVASQEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERAPPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEEMLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQSLGAEHSQ 792
            L+VHT+RF GHSPADPEHERGRK+EKKWAR   DPI IFE + L SG  ++EEL  +K       K+AV FA+ SP PP+ LAKELE+PD P TDYN+R  PA AD IN R L   + +    H + L  K +AG+ITIGDA+NLAILEEMLRDPYTTI AEDLQAGSSYDIPK  QQ FG LRA+DEIIDEGH IGKALGEGMNGYRPIVELMNTNFGIYGMAE+SS GNTYATTGG+FDMP+TIIGAGGTAP QSLGAEHSQ
Sbjct:  287 LQVHTFRFNGHSPADPEHERGRKDEKKWARNAADPIKIFEDKMLASGKFTEEELKELKAKASAACKDAVDFANKSPAPPATLAKELEFPDPPSTDYNQRPAPAGADEINKRILDPEALSNCQAHISQLREKAQAGQITIGDALNLAILEEMLRDPYTTIKAEDLQAGSSYDIPKLTQQTFGKLRASDEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSCGNTYATTGGEFDMPVTIIGAGGTAPAQSLGAEHSQ 550          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7719.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEK3_ECTSI3.300e-14081.82Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
A0A836C8J1_9STRA7.060e-12372.35Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
K0RIS8_THAOC9.700e-12372.73Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
A0A7S2M045_9STRA1.080e-12271.97Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2KFC8_9STRA1.680e-12272.73Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
A0A7S4UV86_9STRA1.950e-12273.11Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
A0A448ZRI2_9STRA1.910e-12173.48Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
A0A7S1USZ6_9STRA1.060e-12073.08Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S2U5Q1_9STRA1.230e-12071.97Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
L1J1I5_GUITC1.400e-12071.97Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7719contigC-tenellus_contig7719:995..6239 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LEK3
Preferred nameodpA
PFAMsE1_dh,Transket_pyr,Transketolase_C
Model size792
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00027,RC00627,RC02742,RC02744,RC02882
KEGG koko:K00161
KEGG ReactionR00014,R00209,R01699,R03270
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230
KEGG ModuleM00307
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
Exons6
Evalue5.41e-141
EggNOG OGsCOG0022@1|root,COG0462@1|root,KOG0225@2759|Eukaryota,KOG0524@2759|Eukaryota
EC1.2.4.1
Descriptionpyruvate dehydrogenase (acetyl-transferring) activity
Cds size792
COG categoryC
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7719.2.1prot_C-tenellus_contig7719.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7719 995..6239 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790053.9050677-CDS-C-tenellus_contig7719:994..11921680790053.9050677-CDS-C-tenellus_contig7719:994..1192Choristocarpus tenellus KU2346CDSC-tenellus_contig7719 995..1192 -
1680790053.9193532-CDS-C-tenellus_contig7719:2282..23811680790053.9193532-CDS-C-tenellus_contig7719:2282..2381Choristocarpus tenellus KU2346CDSC-tenellus_contig7719 2283..2381 -
1680790053.9324315-CDS-C-tenellus_contig7719:2952..30601680790053.9324315-CDS-C-tenellus_contig7719:2952..3060Choristocarpus tenellus KU2346CDSC-tenellus_contig7719 2953..3060 -
1680790053.9416835-CDS-C-tenellus_contig7719:3430..35651680790053.9416835-CDS-C-tenellus_contig7719:3430..3565Choristocarpus tenellus KU2346CDSC-tenellus_contig7719 3431..3565 -
1680790053.953945-CDS-C-tenellus_contig7719:4006..41051680790053.953945-CDS-C-tenellus_contig7719:4006..4105Choristocarpus tenellus KU2346CDSC-tenellus_contig7719 4007..4105 -
1680790053.9664757-CDS-C-tenellus_contig7719:6086..62391680790053.9664757-CDS-C-tenellus_contig7719:6086..6239Choristocarpus tenellus KU2346CDSC-tenellus_contig7719 6087..6239 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7719.2.1

>prot_C-tenellus_contig7719.2.1 ID=prot_C-tenellus_contig7719.2.1|Name=mRNA_C-tenellus_contig7719.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=264bp
LKVHTYRFQGHSPADPEHERGRKEEKKWARAEQDPISIFEKRALGSGVAS
QEELDVIKKAMGTKVKEAVAFADASPPPPSNLAKELEYPDAPETDYNERA
PPAVADMINDRSLPAASRAEAVDHCAMLEGKGKAGEITIGDAINLAILEE
MLRDPYTTIHAEDLQAGSSYDIPKKLQQVFGPLRAADEIIDEGHIIGKAL
GEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAG
GTAPNQSLGAEHSQ
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mRNA from alignment at C-tenellus_contig7719:995..6239-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7719.2.1 ID=mRNA_C-tenellus_contig7719.2.1|Name=mRNA_C-tenellus_contig7719.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5245bp|location=Sequence derived from alignment at C-tenellus_contig7719:995..6239- (Choristocarpus tenellus KU2346)
TTGAAGGTGCACACCTACAGGTTCCAGGGGCACTCACCAGCAGACCCTGA GCATGAGAGGGGACGTAAGGAGGAGAAGAAGTGGGCCAGGGCGGAACAGG ACCCCATCTCAATCTTTGAGAAGCGTGCCCTTGGTTCGGGAGTTGCTTCA CAGGTGGTTAGATTGTCTATTAGACTTCGAATATGTCTGGATGGTTTCTC CACGATGATTGGGTGTAATAATAATATATATATATATATATATATAGTAT GATACGATATGATATGAACAGGGAACCAGTTGAACAAGAACGAAAATATT GAGGAATCGAGTGGAAAAAGAAGAAAGAACGCCTCCCAAAATGAGCGTTT GTGTGTGGTCTGTAGAAAAGGTATATACCTTTTTATTTTTCCTACTGAAT CCATCGATTCTACACCTGATTCGGTGATCAGGTTTGGGGGCACCGTTGTT TTTTTCATTTTAAGTGTTCTTAATTTGTGCATACTTGAAGTGGTTAGGGC ACCCTGCCCTTTTTGCTTGTTTATGGAGCGTACGGTGGTCTTATTTCCCC TACCTCATCTCTCTTACTCTCTTCTTTCTGAAGTTTTCTGGGGGGGGGGA GAGGGGGGGAAGAGTCAGTTTAGAATGTAGGTATGGTTTCAAAATGAGTT TATTAATGTTAGTTGCAAAGAGAAGTTTGATGTCGGAGGTGTGTGCTAGG TGTGGTGTTTTGGTCCTTGCTTCTGTTTGTGGCATGGTTGATAGTGTTTG TTTGTCTGCTGCTGTGTGTGAAGCTAGTAAAGTGACCTTTGTGTCATTTG ATTTATTATTTTTATTAATATGATAAATGGCTATTTATCAATTTGTTATT TTTATTATTTTGAGGAATTTAAAGCTGCTTTTATGTTTAAAAAATGGAAG TTCATGCCTAATTTAAAAAAAAACTGGTTTATACTTTATAATTGTTGTAT TGTTTTGATTCATGGGAGACGTTGCGTATGTTGTAACATAATAGTTCACA CTATTTATGTGGTGTTGATTTGGGGGTTAAGGTTTGAATTTGTTGGAAGT TGAATAAGAGTGTTGTTTTGTGCTCTTGAATGAACCTGAGTAAATTATAT CAGTGATCAATGACCCACTGGACTTACTGTGTTATGAGTGTGGTACTCTC TTTTTTGCATATTACATATTGGTATGGAACACAAGTATCATATTAGCAGT CTGCAGTCATTTCAAACTATTTAATATAATATATTGAGGGGTGGAAGTGT TGAGTTTTTTGAAGGCATTAATGTCACATATTTTCCAGAAAATAGGTGAT GGGGCTAGCCCTAGGGGGGTAACTGTGGAATCGATGTATTGAATGATAGT TTGTGGTATTATACTGTGAAGACAATAGAGTATTTGGAGTATATAAATAA TATAGTGGATAATAGTACTATCCCTAGTCCTATGTAAGAAATTATGAAAT TGAAGCACTTAATTGGTTCTGATTGGTGGACTGGGAGGGTTCTATTGTTG TACTTTTAAAATTAAGATATTAGAAGCTGATATTGTCCATTTCTGTTCCG GTTTTCCAAATATCTTACATTGGATTTTATTTTTACATATAGTACAAGTC TACACGAGGTATTTTTGATAACAATTGGTTTATTATGTGTTACCTGCTGA AAAAATATCAATAATGATACAACCCAATGTGATATTTTTATGTATTTAAT AGTGTGGTGCAATTCTAGAATGGGGTGACACTATTTAATAGTGCTGTGAG ATCTCTTGTAAATAGTCTCCTTCCTACTCCCCCTATCATATTGTATTGGT CCTAATTCTAACTCTACAATAGTTTTTATTATTCTTTGTATGATAGGAGT AGACCTATTCTTTTATTGATGTGCAATTCAGTTTTAAAATACTGCCTCGT ATGATAAGGCTAGACTTTTTCTTGTTATTTTAATGTTGTTGGTTCCATTT AAAAAAATACATTTTTTAGCCCTAATATAAAATCACACTCTGTATGATAG GTGTATACATTTTCATTATTATTACCTACTTTTTGATCAATATTATTACT ATTTACACGATGTAGTACTGCAGTGGGACCTCATTCAAGTCTGACATTTA TCATTGCTCTTTTCTTGTAACTACTTTTTCTCAGGAGGAGTTGGATGTGA TCAAGAAGGCGATGGGCACTAAGGTTAAGGAGGCGGTTGCCTTTGCGGAT GCGTCCCCGCCACCTCCCAGTAACCTTGCCAAGGTCGGTTACTCTTTTGT GAAAGGCATTCTGTGAGAAGGAGAGTGGAGGGGGTCCAAAGGGATGATGT TTGTGTAGGTGTTAAATTGATATCATTTAATTGTTTGGCTGTACAGCATA ACAATATTGCTTTTTTGTCTAAATGTGATTTTTTTAAAATGTATTTTTGT ATTCATATTCCCGGTATGTACTGCTTTTCATTATTTGTTATACACAGTAT TACTGTTAATATTAATGATAATAATAATAATAGCGTATCACACTTGGTAG TGTGTGTGTGTTTTGGTGCTGATGGTAGTAATACATATCGTTAGATCTCT TGAATTGTTTGGTCATGGGTGTTGTAATGGTGTGTAGATGTGGGTTTATG TAGTGATGAAAGAATGTACATATAAATACATACATAGATACATCAACACT TTACTCACACAACACCTACTGCAGGAGCTGGAGTACCCAGATGCCCCAGA AACTGACTACAATGAGAGGGCCCCCCCAGCAGTTGCAGATATGATCAATG ACCGGTCATTGCCTGCAGCTTCTAGGGCAGAGGCGGTGGATCACTGTGCT ATGCTGGAGGTTAGCAAATAGACTGGACATTGTTAGAGAGGGCGACAATT TTTAGCATTTCATCATTTATCTGAAAGATTGTGTTAGTGATTGTGTTTGG TGTAGTGTATACATTAGTATGTAGTAGATCTTGCCGGGGGGGGGGGGTTC TATATTTTATTATTGTTATTCTCGTTAGTCTGAGGGGTCCAGACCCCTGT TCAAAAGGTAGTTAGAAGAAGGAAAAAGAGAAAAATATTTGGAAAATTAT TATTAGCTTTTTAGAAGGTAACTTTTGTGACTGTATATACTACTAGTACT GATGCACGGTATTTTCTCACCTTGTCATTGTGATCATATTTATTTATCAC TGATCATATTTTTTGTTCTTTTTTTTAAGGGTAAGGGCAAGGCAGGTGAG ATCACCATCGGAGATGCGATCAACTTGGCTATCTTGGAAGAGATGCTGCG GGATCCTTATACTACCATCCATGCAGAGGATCTACAGGTGGGTTGATCTT TCCTTACTATTAGTATTAAAGATGATAAATAATAAAATCATATTCTTAAT TTTATTCTGTGTTCTTTTTTGTGTGTGTTTGCATGTGCAATTTTTCTGTT TTTTTAAAGGGTAAAAAATTGATCGCTTTGAAAAAGATTCGCGCATTTCA ATTTTTTATTGTATGAAATGTATGTATGTGCAGAGTTGTTGCCAGTAGAG GAAATGAATGCTGTAAAAAAAGAGGTGACATCCCCACACAGAGAGCAGGT TGATATAATATGACGTGATTCACCCCCTCTCTGACTCTTGATAGAACTGT TTCTGCTCTTGTGGTCTCTCCATAGTCAACAGTCAGGAAATACAAGAAAA AAAAACACCCTTGTGTCCTAGCGACTCAACTTCCCACGTACTCTACTGTC ATTAACATTTGCATTATTCCATCTCCATGAGGTCACTGACTGCCTATTGT ATTGTACAATAGTAGTGTCGATGTTATATTTTTTAACCTTTTCTACCTGG CATTGATGTCTGTTACTACCTTCCACATTTCGGTTTGTGTGTGTGTTTGT GTGCTCAGGCTGGTTCTTCATATGATATCCCAAAGAAGTTGCAGCAGGTT TTTGGTCCTCTCCGGGCGGCTGATGAAATCATTGATGAGGGGCACATCAT CGGGAAGGTGGGGGGGGGGTGGGGGCTGGGGGGTTAGGTATTGTCTATAC TGACTTTGTTTTGGGCTATGTGAGACCGCTTGACAATGAAATGATTTTAC TTTTATTGGGTGTAGATCTGATTCAATGTTGATCTTCTGCCATGTGTGAG TTGTACTTTCATTGTGTTTTGCAAGAACCTTTGTTATTTTTTCAGGGCTG TTTTTCTTCAGGTTTTACAACACTGTGTGTGTGTGAGTAAGGTGTTTTGG TATGGTGGTAAGGTTAATTCTTTTAACAACAGAGGAAGATGTGTGACGTT TGGTGGTGGGTTGTGTGGATGTACAGGCTGCTGAGAACAGTCCTAGAGGT ACAGTCTGGAAATGCCCTACCCACCCAACCCAAAGAGGGTTCTCATGTAT ATGTTGAAGGTGTGAGTTGCGAAGGTGTAGAAAGTGAAACAGAGGAGACT GGGAGGAGGAGTAAGCTTTGATTGTAGTACCTTTTTTTTGGAGAGAGACT GGTGTTGTGTTTTTGACTAGCAAGAGGCAAAATGAAAGTCAAGTACTTGT GTATGTAGAAATAAAACATGACCACAAGATGCAGTGACTTATTGCTGGGT TTTACCTTTCCTGTTGAACGGAATGTACACTGATGGTACTGGTTTTTGTA TTGTCCACACCTGTTTATTTATTAGTATTTTTTTGCTGTCATGTTTGGGA AAAGAAACATAAAAAAAAAGAGAACAAGAGACACATTAGCGATAGTCTGT AAAAGAAAAATGAGACACCTGAGGTAAAGAATGCAGCAATCACCCATGTA GTAGTAGTAATACAGAGGTCTTGCTGTGTACACCAAGAATTAGTTCGGGA GTACTTGGAAACAAGAATGGTAATGCTCTACTACTGTAGTAGGAGTTCCT AAAGCGACACTGTGAAGGCGTTTGAGAAACAAGAGAAGTATCCTGCGGAT CTGTTGAACCCCTCATTCGTAGACCGCTGATTGACGCGGATTGACGCGGA TTGACGCGGTGTCTCAGTTTGAAATTTTTGACACGTCCAAGGATTGATTG TGTTGTGTTGTATTGAAATGATTGTATTGTCTTCTGTGTTCATGCAGGCA CTGGGGGAGGGCATGAATGGGTATCGACCAATAGTGGAGCTGATGAACAC TAACTTTGGTATATACGGTATGGCTGAGCTCAGCAGCGCTGGCAACACCT ATGCGACCACTGGGGGTCAGTTTGATATGCCTTTGACTATCATTGGGGCA GGGGGAACTGCGCCCAACCAGTCTCTTGGAGCGGAGCATTCACAG
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Coding sequence (CDS) from alignment at C-tenellus_contig7719:995..6239-

>mRNA_C-tenellus_contig7719.2.1 ID=mRNA_C-tenellus_contig7719.2.1|Name=mRNA_C-tenellus_contig7719.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=792bp|location=Sequence derived from alignment at C-tenellus_contig7719:995..6239- (Choristocarpus tenellus KU2346)
TTGAAGGTGCACACCTACAGGTTCCAGGGGCACTCACCAGCAGACCCTGA
GCATGAGAGGGGACGTAAGGAGGAGAAGAAGTGGGCCAGGGCGGAACAGG
ACCCCATCTCAATCTTTGAGAAGCGTGCCCTTGGTTCGGGAGTTGCTTCA
CAGGAGGAGTTGGATGTGATCAAGAAGGCGATGGGCACTAAGGTTAAGGA
GGCGGTTGCCTTTGCGGATGCGTCCCCGCCACCTCCCAGTAACCTTGCCA
AGGAGCTGGAGTACCCAGATGCCCCAGAAACTGACTACAATGAGAGGGCC
CCCCCAGCAGTTGCAGATATGATCAATGACCGGTCATTGCCTGCAGCTTC
TAGGGCAGAGGCGGTGGATCACTGTGCTATGCTGGAGGGTAAGGGCAAGG
CAGGTGAGATCACCATCGGAGATGCGATCAACTTGGCTATCTTGGAAGAG
ATGCTGCGGGATCCTTATACTACCATCCATGCAGAGGATCTACAGGCTGG
TTCTTCATATGATATCCCAAAGAAGTTGCAGCAGGTTTTTGGTCCTCTCC
GGGCGGCTGATGAAATCATTGATGAGGGGCACATCATCGGGAAGGCACTG
GGGGAGGGCATGAATGGGTATCGACCAATAGTGGAGCTGATGAACACTAA
CTTTGGTATATACGGTATGGCTGAGCTCAGCAGCGCTGGCAACACCTATG
CGACCACTGGGGGTCAGTTTGATATGCCTTTGACTATCATTGGGGCAGGG
GGAACTGCGCCCAACCAGTCTCTTGGAGCGGAGCATTCACAG
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