prot_C-tenellus_contig76.11.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig76.11.1
Unique Nameprot_C-tenellus_contig76.11.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length182
Homology
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BLAST of mRNA_C-tenellus_contig76.11.1 vs. uniprot
Match: D8LUA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA4_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.910e-17
Identity = 48/117 (41.03%), Postives = 79/117 (67.52%), Query Frame = 0 
Query:   28 YVVPSTCYSRCLPEFQLLCASGPVAEEQRSLEASLEDLASDDALGWTTSDGDVLQQLEAQMEEEVVTYLERIWQEIRPEEQARLQDMEASSRHRSSSLAVLRGGVDDERSRQEAVLR 144
            ++ P  C+   LPEF +LCASG V E++RSL+ +L  L +D+ LG   +  D+L Q+E +MEE+V  YL+R+ +++ P E +RLQ    + R +++++A LR   D++R+ QEA+LR
Sbjct:  487 FIFPERCFPLALPEFHVLCASGAVGEDKRSLDGALSKLGADNLLGPAPA-ADLLLQVENKMEEQVKAYLKRMQEDVTPAEASRLQATHGNLRWKAANVASLRADADEQRALQEAILR 602
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig76.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUA4_ECTSI1.910e-1741.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig76contigC-tenellus_contig76:28839..31134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig76.11.1mRNA_C-tenellus_contig76.11.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig76 28059..31577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig76.11.1 ID=prot_C-tenellus_contig76.11.1|Name=mRNA_C-tenellus_contig76.11.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=182bp
MRGWMPPFSADDILFLLRKEVLGSQCCYVVPSTCYSRCLPEFQLLCASGP
VAEEQRSLEASLEDLASDDALGWTTSDGDVLQQLEAQMEEEVVTYLERIW
QEIRPEEQARLQDMEASSRHRSSSLAVLRGGVDDERSRQEAVLRGFRSHR
DAPGGVTSLSVAGGGAHTGGSSRSKVDLGSM*
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