mRNA_C-tenellus_contig76.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig76.1.1
Unique NamemRNA_C-tenellus_contig76.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Match: D7FPH1_ECTSI (Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPH1_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 9.970e-87
Identity = 157/287 (54.70%), Postives = 204/287 (71.08%), Query Frame = 1
Query:  313 GPKRRPVHWNKISPAKIEKTVFNEINPASVVLPLQHLKDHFVEKPKVSKPTSSAKDGMREGGQGQAK----KKKKTINLLDAKMLQNNGIVFKRFRMEPQELCDKVLGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGELSDLDDVQQFMVLTARMPRYKNRLDCLTFMQSCEGSASLIDEKLILVQEAIMGVGESPKLKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVKTTDQKKTLLHFFCEWAKNNEPHLLDLYQDVEKSQEASRWSLLELRKQV 1161
            GPKRRPVHW+KI+PA +E+TVF+EI+P+ V LP + L + F EKPK  KP    KD   +           KK + + LLD K L+N GI FKRFRM+P +L D ++ MDL + D+DK  AL  I+P+ D L TLKG++G+L  LD+V  FMVLTA++PRY  RLDC  FM+     A  + EKL LV  A++ V +SP+LKR+IEVVLA+GN+LNEGTRNG+A+AIKL SLLKL+TVKT D+KKTLLH    WAK+ EP LL + QD+E + EAS WSL +L++QV
Sbjct:  710 GPKRRPVHWDKIAPANLEQTVFSEIDPSWVNLPTELLAESFAEKPKEKKPAD--KDAKEKXXXXXXXXXXXKKAERVELLDGKTLRNTGIAFKRFRMKPHDLRDSLVAMDLDKFDTDKFIALRNISPSPDDLPTLKGYEGDLDKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLSEKLGLVSIAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGEAKAIKLASLLKLDTVKTMDKKKTLLHVLMSWAKDKEPDLLLMDQDLEHASEASHWSLTDLKQQV 994          
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Match: A0A835Z2Y1_9STRA (FH2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y1_9STRA)

HSP 1 Score: 204 bits (520), Expect = 8.910e-55
Identity = 118/284 (41.55%), Postives = 178/284 (62.68%), Query Frame = 1
Query:  316 PKRRPVHWNKISPAK--IEKTVFNEINPASVVLPLQHLKDHFVEKPKVSKPTSSAKDGMREGGQGQAKKKKKTINLLDAKMLQNNGIVFKRFRMEPQELCDKVLGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGELSDLDDVQQFMVLTARMPRYKNRLDCLTFMQSCEGSASLIDEKLILVQEAIMGVGESPKLKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVKTTDQKKTLLHFFCEWAKNNEPHLLDLYQDVEKSQEASRWSLLELRKQV 1161
            PKRR VHW+ + P +   EKTVF E+ P SV LP++ L+D F EKP     T++    + +     AK +    +LLDAK  QN GI  KR RM+P ++ +++  M  + L +D L AL  +AP    L TL+ ++GE S+LD+V Q ++  +++PRY  R+D   F+++    A  I+ ++ +V  A+M   ES  L +++E+VLA+GNFLNEGT  GDA+ IKL SLL+L TVKT D+KKTLLH        ++P +L+L +D+E  +EA+   L EL++Q+
Sbjct:  522 PKRRLVHWDPLEPTRSSFEKTVFTELQPNSVPLPVEKLRDAFEEKPPAEGETAAVPAKISKAAAQAAKAR----SLLDAKTKQNVGIALKRLRMKPAKVIEEIYTMSDRTLTTDNLLALREMAPDPSLLRTLQNYKGEPSELDEVTQLLLAISKVPRYTARMDSTIFIRAYVEDAERIEARVKMVHMAVMEALESKHLPKVLEIVLALGNFLNEGTSKGDAKGIKLASLLQLETVKTLDRKKTLLH--------SQPEVLELEEDLENCKEAATIGLDELQQQI 793          
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Match: A0A6H5JDW8_9PHAE (FH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDW8_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 2.520e-44
Identity = 116/296 (39.19%), Postives = 168/296 (56.76%), Query Frame = 1
Query:  313 GPKRRPVHWNKISPAKIEKTVFNEI-NPASVVLPLQHLKDHFVEKPKVSKPTSS----AKDGMREGGQGQAKKKKKTINLLDAKMLQNNGIVFKRFRMEPQELCDKVLGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGEL-SDLDDVQQFMVLTARMPRYKNRLDCLTFMQSCEGSASLIDEKLILVQEAIMGVGESPKLKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVKTTDQKK-------TLLHFFCEWAKNNEPHLLDLYQDVEKSQEASRWSLLELRKQV 1161
            GP RR +HWNK+  A I  T+F EI + A+V +P + + + F EKPK  K   +    A+     G             LLDAK     GIVF    + P+ + + V+ MDL  LD D L  L  + P+  +   L  F+G++ S+L +V+QF+VL   +P Y+ RL C  ++Q+ E   +   EK+ +V +AI  V  S KLKR++ VVLA+GNFLNEG+ NGDA+AI L+SLLK+ TV+ T ++         L H   EWA  +EP LL L +D+  + +ASR SL +L+  V
Sbjct:  722 GPARRGLHWNKMRTA-ITGTIFEEIESEAAVDIPKEFILEGFQEKPKGPKKVGNVGGDAQGTAPAGXXXXXXXXXXREPLLDAKAALQYGIVFSTVSVSPETVRNAVMSMDLSFLDPDTLEKLEKLLPSPAEQKILTSFKGDIVSELAEVEQFLVLATGIPDYEIRLRCAGYIQAFEPERASALEKITIVSDAISQVTNSAKLKRLLAVVLAVGNFLNEGSSNGDAKAITLESLLKITTVRRTTKRPFAGGGDDNLAHSIMEWAAKSEPSLLSLGEDLPLAAKASRLSLDDLKTNV 1016          
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Match: A0A7S2F869_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F869_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.330e-38
Identity = 98/275 (35.64%), Postives = 155/275 (56.36%), Query Frame = 1
Query:  325 RPVHWNKISPAKIEKTVFNEINPASVVLPLQHLKDHFVEKPKVSKPTSSAKDGMREGGQGQAKKKKKTINLLDAKMLQNNGIVFKRFRMEPQELCDKVLGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGELSDLDDVQQFMVLTARMPRYKNRLDCLTFMQSCEGSASLIDEKLILVQEAIMGVGESPKLKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVKTTDQKKTLLHF---FCEWAKNNEPHLLDLYQDVEKSQEASRWSL 1140
            R + WNKISP +I+ TV+ +I+   V L    L ++F   PK  K     K   +EG + +   K K IN+LD K+LQN GI   R+RM+P  +   +L M+ + +D +KL +L A+ PT +  + ++ F+G+   L  V++F +    +PRY +RL+C+ F        S ++  L +V +A   + ES + KR++EV L +GNFLN GT  G     KL SL  L T+K+ D K+TL+++   +CEWA   E  LL + ++++    A R  L
Sbjct:   55 RALFWNKISPEQIDDTVWKDISDEKVKLDEPFLLEYF---PKAVKRVEKPK---KEGDKPKKDAKPKEINVLDGKVLQNVGIALARYRMDPIAIKHHILKMNEEVIDIEKLNSLYALRPTSEDTTAIREFEGDHKMLGKVEKFFLEIMDIPRYDSRLECMIFKSRFPLFMSELNTSLDIVGQATKEINESRRFKRLLEVTLKLGNFLNGGTSRGGIYGFKLPSLNMLATIKSVDNKRTLMNYLTIWCEWA--GEKELLKVREELKTVPVAQRHPL 321          
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Match: D8LCH4_ECTSI (FH2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH4_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 4.430e-37
Identity = 107/295 (36.27%), Postives = 160/295 (54.24%), Query Frame = 1
Query:  313 GPKRRPVHWNKISPAKIEKTVFNEINPASVV-----LPLQHLKDHFVEKPKVSKPTSSAKDGMREGGQGQAKKKKKTINLLDAKMLQNNGIVFKRFRMEPQELCDKVLGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGE-LSDLDDVQQFMVLTARMPRYKNRLDCLTFMQSCEGSASLIDEKLILVQEAIMGVGESPKLKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVKTTDQKK-------TLLHFFCEWAKNNEPHLLDLYQDVEKSQEASRWSLLELRKQ 1158
            GP RR VHWNKI  A I  T+F EI     V       + H+ DH      V  P             G ++++ ++    ++              + P+ + + V+ MDL  LD D L  L  + P   +LS LK F+ + +S+L +V+QF+VL +R+P Y+ RL C   MQ+ E   +    K+ +V +AI  V +S KLKR++ VVLA+GNFLNEGT +GDA+AI L+SLLK+ TV+ T ++         L H   EWA  +EP LL L +D+  + +ASR +L +L+K+
Sbjct:  737 GPARRGVHWNKIRTA-ITGTIFEEIESEEAVGKAGGRRVSHVYDHGTH---VLYP-------------GWSQRRNRSARSFNS--------------VSPETVRNAVMSMDLSFLDPDTLEKLEKLLPPPAELSILKSFESDDVSELAEVEQFLVLASRIPNYQIRLRCAGDMQAFEPDTASALAKITIVSDAISQVTDSAKLKRLLAVVLAVGNFLNEGTGSGDAKAITLESLLKITTVRRTTKRPFAGGGDDNLAHSIMEWAAKSEPSLLSLGEDLPLAAKASRLALDDLKKE 1000          
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Match: W4FPK6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPK6_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.200e-33
Identity = 89/279 (31.90%), Postives = 144/279 (51.61%), Query Frame = 1
Query:  325 RPVHWNKISPAKIEKTVFNEINPASVVLPLQHLKDHFVEKPKVSKPTSSAKDGMREGGQGQAKKKKKTINLLDAKMLQNNGIVFKRFRMEPQELCDKVLGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGELSDLDDVQQFMVLTARMPRYKNRLDCLTFMQSCEGSASLIDEKLILVQEAIMGVGESPKLKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVKTTDQKKTLLHFFCEWAKNNEPHLLDLYQDVEKSQEASRWSLLELRKQV 1161
            R + W +I    ++ TV++ ++  SV L    L+  F    + + P S+      E    + KK    + LLD+K  QN GI   RF++ P ++   +L MD   +  D L++L A+APTL++   LK + G +  L  V++F +    +PRY  R+ C  F    E     I  ++  +  A   + +S K +RI+E VLAIGN++N GT  G A   KLD+L KL+TV+  D K TL+H+     +  +P L+    +V    EA R SL +++  +
Sbjct:  542 RALFWTRIPVNVVQSTVWSSLSDTSVSLEPFDLEWMF----RKANPASTVDKDSNE----KKKKDSAVVLLLDSKTQQNVGIALARFKLSPSDVKAGLLAMDQTAISVDHLSSLIALAPTLEEQDILKNYDGPVHVLGAVEKFFLEMLSIPRYTQRIKCFRFSLQFEHRVLEIQAQVDTLSAATDQIADSAKFRRILETVLAIGNYMNGGTARGGAYGFKLDALAKLHTVRGIDSKVTLMHYLARHLEQFQPDLIAFVTEVPHVTEAKRLSLDQIKADI 812          
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Match: W4FPN0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPN0_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.610e-33
Identity = 89/279 (31.90%), Postives = 144/279 (51.61%), Query Frame = 1
Query:  325 RPVHWNKISPAKIEKTVFNEINPASVVLPLQHLKDHFVEKPKVSKPTSSAKDGMREGGQGQAKKKKKTINLLDAKMLQNNGIVFKRFRMEPQELCDKVLGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGELSDLDDVQQFMVLTARMPRYKNRLDCLTFMQSCEGSASLIDEKLILVQEAIMGVGESPKLKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVKTTDQKKTLLHFFCEWAKNNEPHLLDLYQDVEKSQEASRWSLLELRKQV 1161
            R + W +I    ++ TV++ ++  SV L    L+  F    + + P S+      E    + KK    + LLD+K  QN GI   RF++ P ++   +L MD   +  D L++L A+APTL++   LK + G +  L  V++F +    +PRY  R+ C  F    E     I  ++  +  A   + +S K +RI+E VLAIGN++N GT  G A   KLD+L KL+TV+  D K TL+H+     +  +P L+    +V    EA R SL +++  +
Sbjct:  542 RALFWTRIPVNVVQSTVWSSLSDTSVSLEPFDLEWMF----RKANPASTVDKDSNE----KKKKDSAVVLLLDSKTQQNVGIALARFKLSPSDVKAGLLAMDQTAISVDHLSSLIALAPTLEEQDILKNYDGPVHVLGAVEKFFLEMLSIPRYTQRIKCFRFSLQFEHRVLEIQAQVDTLSAATDQIADSAKFRRILETVLAIGNYMNGGTARGGAYGFKLDALAKLHTVRGIDSKVTLMHYLARHLEQFQPDLIAFVTEVPHVTEAKRLSLDQIKADI 812          
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Match: A0A024TTN5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TTN5_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.810e-33
Identity = 92/288 (31.94%), Postives = 151/288 (52.43%), Query Frame = 1
Query:  319 KRRPVHWNKISPAKIEKTVFNEINPASVVLPLQHLKDHFVEKPKVSKP--TSSAKDGMREGGQGQAKKKKKTINLLDAKMLQNNGIVFKRFRMEPQELCDKVLGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGELSDLDDVQQFMVLTARMPRYKNRLDC----LTFMQSCEGSASLIDEKLILVQEAIMGVGESPKLKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVK-TTDQKKTLLHFFCEWAKNNEPHLLDLYQDVEKSQEASRWSLLELRKQV 1161
            K R ++W  ++ A +E +++  ++   + L    L   F +  K + P  TSS K G    G G    K KT++L+D+K  QN  I   RFRM P+++   ++ +D K L  +++ +L A+ PT ++L  +KG++G+++ L + ++F +  + +PR  NRL      LTF Q  +     +  KL L+++A            ++EVVLA+GN+LN GT  G A   KLD L KL  VK TT   KTLLH   ++   N P   D Y+ +   ++ S  S   L+  +
Sbjct:  944 KLRSLYWTPLADAAVEGSIWLNLDETKLGLDYTLLDKEFGQDKKANDPAVTSSTKSGS---GNGTTLGKPKTVHLVDSKRQQNCSIALSRFRMAPKDIKAAIVALDDKLLTLERIQSLAAMVPTPEELDLVKGYEGDVAVLGETEKFFLAISDLPRLSNRLKAMEATLTFGQRYDD----VKGKLKLLEQAXXXXXXXXXXLSLLEVVLAVGNYLNRGTSRGGAYGFKLDILPKLTQVKATTSPNKTLLHVIADYVAANVPAAHDFYESLRSLEDVSAISFTLLQSDI 1224          
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Match: D0N4U5_PHYIT (Formin-homology 2 domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0N4U5_PHYIT)

HSP 1 Score: 138 bits (348), Expect = 5.410e-32
Identity = 84/276 (30.43%), Postives = 144/276 (52.17%), Query Frame = 1
Query:  325 RPVHWNKISPAKIEKTVFNEINPASVVLPLQHLKDHFVEKPKVSKPTSSAKDGMREGGQGQAKKKKKTINLLDAKMLQNNGIVFKRFRMEPQELCDKVLGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGELSDLDDVQQFMVLTARMPRYKNRLDCLTFMQSCEGSASLIDEKLILVQEAIMGVGESPKLKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVKTTDQKKTLLHFFCEWAKNNEPHLLDLYQDVEKSQEASRWSLLELR 1152
            RP+ W ++    +  TV+ ++N +   L ++ ++  F + P  +      K    E    Q K+    + L D K  QN  I   RF+M  +++ + +  +D ++L S+ L  L +I+PTL+++  LK + G++  L +V++F +    +PRY  R+ C  +    E        +L  +  A   V ES K +R++E +LAIGN+LN  T  G A   KLD+L+KL+T+K+ D + TL+HF     + N P ++    +V    EA R SL +LR
Sbjct:  501 RPLFWTRVPVNVVSSTVWMKLNDSHAELDVEEMEWMFRKNPVDASKKLDEKKKEAEKVPAQPKE----VLLFDPKRQQNVSIAIARFKMSSEDIKNAIYALDGQQLGSEVLNVLISISPTLEEIDMLKNYDGDVKLLGNVEKFFLDLLTIPRYTQRIKCFRYKLQFENRILETQAQLDTLVAATDQVTESDKFRRVLEHILAIGNYLNGSTPRGGAYGFKLDTLMKLHTLKSVDPRVTLMHFLLRQLEENTPDVITFAGEVPHIVEAKRLSLDQLR 772          
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Match: R1F2A9_EMIHU (FH2 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F2A9_EMIHU)

HSP 1 Score: 137 bits (345), Expect = 1.040e-31
Identity = 85/246 (34.55%), Postives = 134/246 (54.47%), Query Frame = 1
Query:  325 RPVHWNKISPAKIEKTVFN-EINPASVVLPLQHLKDHFVEKPKVSKPTSSAKDGMREGGQGQAKKKK--KTINLLDAKMLQNNGIVFKRFRMEPQELCDKV-LGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGELSDLDDVQQFMVLTARMPRYKNRLDCLTFMQSCEGSASLIDEKLILVQEAIMGVGESPKLKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVKTTDQKKTLLHF 1050
            R +HW K+   K++ T++  E++ + V +    L+  F  K         AK G  +G + + KKKK  +  NLLDAK  QN GI   R +    EL + +  G D   +D+D L++L  I PT + L  ++ + G    L   ++FM    ++PRY+ R+ C+    + +   + I E + LV +A+  V  SP LK+++++ LA+GN+LN GT  G A   KLD+L KL+  KT D K TLLH+
Sbjct:  294 RQLHWGKLPDMKVKGTLWEKEVDDSKVAIDKDELESLFATK-------QPAKAGGADGEKKEDKKKKGPEMANLLDAKTSQNTGIARARIKQTDAELAETLRTGGDA--MDADTLSSLLRILPTEENLEAVRDYDGPEESLSQAEKFMRAVGKVPRYQLRVKCMLIRATFDEKVAEISESVSLVAQAVKEVRTSPALKKVLQMTLALGNYLNGGTNKGAAWGFKLDTLSKLSGTKTVDNKSTLLHY 530          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig76.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPH1_ECTSI9.970e-8754.70Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A835Z2Y1_9STRA8.910e-5541.55FH2 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JDW8_9PHAE2.520e-4439.19FH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2F869_9STRA1.330e-3835.64Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D8LCH4_ECTSI4.430e-3736.27FH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
W4FPK6_9STRA3.200e-3331.90Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4FPN0_9STRA3.610e-3331.90Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A024TTN5_9STRA3.810e-3331.94Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
D0N4U5_PHYIT5.410e-3230.43Formin-homology 2 domain-containing protein n=13 T... [more]
R1F2A9_EMIHU1.040e-3134.55FH2 domain-containing protein n=1 Tax=Emiliania hu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig76contigC-tenellus_contig76:1426..5524 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FPH1
PFAMsDrf_FH3,Drf_GBD,FH2
Model size1164
Max annot lvl2759|Eukaryota
KEGG koko:K04512,ko:K05745,ko:K10293,ko:K11238
KEGG Pathwayko04011,ko04310,ko04810,map04011,map04310,map04810
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005522,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005886,GO:0005938,GO:0006928,GO:0006996,GO:0007010,GO:0007015,GO:0008064,GO:0008092,GO:0008150,GO:0008154,GO:0008289,GO:0009987,GO:0010638,GO:0015629,GO:0016020,GO:0016043,GO:0016477,GO:0022607,GO:0030029,GO:0030036,GO:0030041,GO:0030832,GO:0030833,GO:0030838,GO:0030865,GO:0030866,GO:0031254,GO:0031334,GO:0031344,GO:0031345,GO:0032153,GO:0032154,GO:0032155,GO:0032271,GO:0032273,GO:0032535,GO:0032956,GO:0032970,GO:0033043,GO:0034622,GO:0035091,GO:0040011,GO:0043167,GO:0043168,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0045010,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048870,GO:0050789,GO:0050794,GO:0051015,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051258,GO:0051493,GO:0051495,GO:0051674,GO:0060491,GO:0065003,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066,GO:0097435,GO:0098590,GO:0099568,GO:0110053,GO:0120032,GO:0120033,GO:0120035,GO:1902903,GO:1902905,GO:1904170,GO:1904171
Exons6
Evalue1.63e-87
EggNOG OGsKOG1922@1|root,KOG1922@2759|Eukaryota
Descriptionactin binding
Cds size1164
COG categoryE
BRITEko00000,ko00001,ko03029,ko04121,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig76.1.1prot_C-tenellus_contig76.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig76 1426..5524 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790046.109579-CDS-C-tenellus_contig76:1425..15731680790046.109579-CDS-C-tenellus_contig76:1425..1573Choristocarpus tenellus KU2346CDSC-tenellus_contig76 1426..1573 -
1680790046.1238687-CDS-C-tenellus_contig76:1735..18691680790046.1238687-CDS-C-tenellus_contig76:1735..1869Choristocarpus tenellus KU2346CDSC-tenellus_contig76 1736..1869 -
1680790046.133121-CDS-C-tenellus_contig76:2676..28171680790046.133121-CDS-C-tenellus_contig76:2676..2817Choristocarpus tenellus KU2346CDSC-tenellus_contig76 2677..2817 -
1680790046.1423795-CDS-C-tenellus_contig76:3498..36521680790046.1423795-CDS-C-tenellus_contig76:3498..3652Choristocarpus tenellus KU2346CDSC-tenellus_contig76 3499..3652 -
1680790046.1522486-CDS-C-tenellus_contig76:4733..49181680790046.1522486-CDS-C-tenellus_contig76:4733..4918Choristocarpus tenellus KU2346CDSC-tenellus_contig76 4734..4918 -
1680790046.162643-CDS-C-tenellus_contig76:5122..55241680790046.162643-CDS-C-tenellus_contig76:5122..5524Choristocarpus tenellus KU2346CDSC-tenellus_contig76 5123..5524 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig76.1.1

>prot_C-tenellus_contig76.1.1 ID=prot_C-tenellus_contig76.1.1|Name=mRNA_C-tenellus_contig76.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=388bp
APPKLVGAIPAPPALPPRSGGAIPAPPPLPGIPRPQGSVIPVPPSLPAAG
IPMPPPLPGMIPRAPMPPPLPGMIPRAPPAPGAPPLPGVPLGVPPPPSMP
KKPPGPKRRPVHWNKISPAKIEKTVFNEINPASVVLPLQHLKDHFVEKPK
VSKPTSSAKDGMREGGQGQAKKKKKTINLLDAKMLQNNGIVFKRFRMEPQ
ELCDKVLGMDLKELDSDKLAALCAIAPTLDQLSTLKGFQGELSDLDDVQQ
FMVLTARMPRYKNRLDCLTFMQSCEGSASLIDEKLILVQEAIMGVGESPK
LKRIIEVVLAIGNFLNEGTRNGDARAIKLDSLLKLNTVKTTDQKKTLLHF
FCEWAKNNEPHLLDLYQDVEKSQEASRWSLLELRKQV*
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mRNA from alignment at C-tenellus_contig76:1426..5524-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig76.1.1 ID=mRNA_C-tenellus_contig76.1.1|Name=mRNA_C-tenellus_contig76.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4099bp|location=Sequence derived from alignment at C-tenellus_contig76:1426..5524- (Choristocarpus tenellus KU2346)
GCTCCCCCCAAGCTTGTGGGTGCTATCCCAGCACCTCCTGCCCTGCCTCC GAGGTCAGGGGGGGCTATTCCTGCTCCCCCTCCCCTCCCAGGAATTCCAA GGCCCCAAGGCAGTGTTATCCCTGTGCCCCCCTCCCTTCCTGCAGCGGGA ATACCAATGCCACCTCCATTGCCTGGAATGATTCCCAGGGCTCCTATGCC ACCCCCTTTGCCTGGCATGATTCCCAGGGCTCCTCCAGCGCCGGGAGCTC CACCCCTGCCTGGAGTGCCGCTGGGGGTGCCACCACCACCATCTATGCCC AAGAAACCTCCAGGGCCGAAGAGGCGGCCAGTGCACTGGAATAAGATTTC ACCTGCCAAGATAGAGAAAACTGTGTTTAATGAGATTAATCCAGCTTCAG TGGTGAGAGGAGAGACTGCATGTAGAGGGATAATTGGCCTCTGGGGGTTT GGGGTAGGGGGGAGGGAAGGCGAGATTAATGAATGCTGTGATTTGTAATT TTTACTAGAGCGTGGTGTACATCTGTTGAGTAAAATATGATGTCTTTGCT GGTAGTGACACTACATCTTCTCACACCATTTATATATTTATATATATTAT TTTTAGGTGCTTCCCCTGCAACACCTGAAGGACCATTTTGTAGAGAAACC TAAGGTGTCAAAGCCCACCAGCTCAGCCAAGGATGGGATGAGAGAAGGGG GACAAGGGCAGGCTAAGAAGAAAAAGAAGACGATAAATCTTTTGGATGCC AAGATGCTTCAGAACAATGGTATCGTCTTCAAGCGCTTTAGGTAAGGTTA AAGATGTGCAGTAAATGTCAAGTTTTATTTTTTGTGGGTGAAGTATGGTG CTTGTTTCCTGGTATGATGTGATTGGATGGTGGTGTAGTGGCGTGGAGAG GTGGGGTAGTTAATGGATTAGAGTAAATATCAGGTAGTTGTGATATTTGT ACTTCTCAGCGCAGAGCTTATTGAGTGATCAGGGTTTTTTTATCCAGATC TCTTAGTAACTGAGTGGCAGTTGTTCTTCCTGGTTGTGTGTTGTGTGGTG CTTACCAAGTTCATTTGTTAAGAATAGTTGTTAGCCTGTGTGTGTTGCTG TCACCCCTATAATTGGAATGTATTTATTATTTTTTAATGTAAATTTGCAG TACATGCATACTGATGTGTCAAAATGATTGACTTGCAAAATATATGTTTC TTGATAAATATATGATGTACATGCAATAGTCACAGTTTTTTTACTGCACT CCAGAGTAAGTGGTAAGTGCTTGACTTCCTTGCACGTGAGTATATTTGGG TTTTGAAGTATGCCTATTTTTTTATAGGGTATTGTAGAAATGGGAGGCAC TTCCTTCATTTTTTTCTCTCAGCTGTGGTGTGTAGAGGTTGCCAAAGTCC AAGAACCAGTGACAGCCCATAGATATGTCAATACCAGGGTCAACAAGTAG TGTGATAGATGCGCTGGACTTGTTCCAGAATGTTGTTAGTGGGGGTGGGG GGGGTGGAACGAAGTAGGGAGAGTAAAGATCTGCGGGAGTGTTGATTTAC TCTGAGTGTATGGTAACTATGAAGATATAATGTCGTGTCAGCATCTTTTG TAACTCCTGCCAACCATTTCATTTGATAGTTGTAGTTGCTGCTGTACTCT CCGCTTGCAAACAAATGCAGGGCGCCTCTGGACCTCCCTCTCACTACCTT CCCCTATATCAATAAACCACTGGACCTGTGCATTGTCTGCCTGTAATCTT GCCCCCCTTCCACCCTGTTTTGAGAGTTTCTATAAATATGTGTTTAAATG TTACTATATTCCTTTGGAAAACTTTACTTGGCAAATAAAACATACGTTTA TATATCATGTTTTGTTTGCCAGGATGGAGCCACAGGAGCTTTGTGACAAG GTCCTGGGTATGGACCTTAAAGAGCTAGACTCTGATAAGCTGGCTGCTCT ATGTGCCATTGCCCCAACACTGGACCAGCTTTCTACACTCAAGGGTTTTC AGGGGGAGCTCTCTGATTTGGATGATGTCAGTGTCGGGTTGGGGGGGGTG GGGGTCTGAGTTGAATGGTAGCAAAGTAGGGATAGGAGATGGACATTGGA GTTGGAGGCATGGAGAATAAGGCTAGTACCCCATAGGAAAGAGGTGGTCA ATGGCTTGGTAGAGGGGAGATGTGAGATTAAGAAGGTGATCGAAGTTGTT AGGAAAAGATATATTTGTTGGTATTAGCAGGTAGGGTAGGGTGGAATTTT TTGTATGAGTTTAGTGGAAGGGTGGTAGGGGTAAGGATTAATATGGTACT TGTTTTAGTGTTTTATAGTGTTATGTTGCGGTTTGAATATACCGGGAACT TGGACAGCTGGGATTTGAGTTTTGAGGGTTGGGAATGTTGGCGTGTTCAC ATGGTAGAGCCATGTCAGAGTTTGGATGTGAAGGTTGAGGACTGTATGGT AGTCATTGCATTTAATTCAGGCTTGTGGTTTGAGCTCTGGTGGGAAGACT TGCAGCTCCTTATTCTATGGGGGCTTTGATGGGACCTTTTTATTGTAGAG AAAGTTTGAACTAGTTTTACTTTTGCATGTATTTGTATATGACGGATATA ACCATTTTACCTGCCATCTGTGGCCTCTGTCAACGATAACAAAATTGTGT GTGTATCAGATAGCTCACAAACACGCCTCTTACTTGTGCTTTCTTTGTTG TACATAGGTCCAGCAGTTCATGGTACTTACAGCACGCATGCCCCGATACA AGAACCGTCTAGACTGTCTGACTTTCATGCAGTCCTGTGAAGGATCTGCT AGTCTCATTGATGAGAAGCTGATTCTGGTCCAAGAAGCGATAATGGGGGT GAGGGGAAGATTGTCAAAGTGAACTTGTTCTTACCATGCAACTTTTGACC TGCTTTTTTGTATGAGCTGCAGAAAGTAAGGTTCTGAGGAGAGGTATTAT AATGTGATGGATGTGATGCAATGCAATAGTGTAGTGTAGTGTATGGTATG GTATGGTATCTTGGTGTTGTGCATATGTGTAATTTTTTGGCACAGTGCAG GTGTATGTTTCGGCTTCTGCGGACTATTGTAACTATTTTAGCACTTACAT GTAACAACACTCAACAGTCTGGGTCTAGCAGGGACCAATGTAGGACATTC CTCTGTGACTTGGTAGTGTGACCGGTAGTTTAACCAGGATTGTTAGCCAA GATGCCGACTGTATTGGCCTGTGCTGAGTCGTCTGCCTTGATTTGCTTTG CTTCTGGTTCTACCCCCCTTGGAAATGTAGGTTAATGTACACTACAGTTT GATACCTCTGTTTAGAGTGGTGAGAATGGGATCAATTATGGTACACTAGG TAAGTCAATACACTCAGGGGATAGGGTAACGGTAAGGATAAGGATAATGG TTGTAATGTTGGTGTCAAGTTTGGGTATCCGTAAAGATTTGGACTGTGGA AGGTGAGGTTAGGGCTATTTTGTTCATTGTATTGTGTTGTGTTGGTGAAG ATGTCATATCAAAGACGCAATCTCTTAGTACAGATCTTGACACTACTGTT ACGGGGAATGCGGCGATAGAATAGGGTTAGGGTTTATGGTTATCCTATGC ACATAAATTGGTCTGTAACCTACTGACTGACTTCTGCTTTGTTGAGACTT GACAGGTGGGGGAATCCCCCAAGTTGAAGCGGATTATTGAAGTAGTGCTA GCGATTGGAAACTTCCTGAACGAGGGCACTCGGAATGGTGATGCCCGTGC CATCAAGCTGGACTCGCTGCTGAAGCTTAACACGGTCAAGTGAGGGGAAG TGCATGGGTTTGACTGTTGAGAAGGCTATGTGGATTGGAGAGATCAATAT GATAAGTACATACGTATATGGATATACAGATGTGCACATGGCTGCAATTT TACCTAAAGGTTATGGTGATGTTTTGAATCTCTTTTTTTTGGCTGTTTCA GGACAACAGACCAGAAGAAGACCCTTCTTCACTTCTTTTGTGAGTGGGCC AAGAACAATGAGCCACACCTGCTGGATCTGTATCAAGATGTTGAGAAGTC ACAGGAGGCCTCCAGGTGGAGCCTACTGGAACTCAGGAAGCAGGTGTGA
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Coding sequence (CDS) from alignment at C-tenellus_contig76:1426..5524-

>mRNA_C-tenellus_contig76.1.1 ID=mRNA_C-tenellus_contig76.1.1|Name=mRNA_C-tenellus_contig76.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1164bp|location=Sequence derived from alignment at C-tenellus_contig76:1426..5524- (Choristocarpus tenellus KU2346)
GCTCCCCCCAAGCTTGTGGGTGCTATCCCAGCACCTCCTGCCCTGCCTCC
GAGGTCAGGGGGGGCTATTCCTGCTCCCCCTCCCCTCCCAGGAATTCCAA
GGCCCCAAGGCAGTGTTATCCCTGTGCCCCCCTCCCTTCCTGCAGCGGGA
ATACCAATGCCACCTCCATTGCCTGGAATGATTCCCAGGGCTCCTATGCC
ACCCCCTTTGCCTGGCATGATTCCCAGGGCTCCTCCAGCGCCGGGAGCTC
CACCCCTGCCTGGAGTGCCGCTGGGGGTGCCACCACCACCATCTATGCCC
AAGAAACCTCCAGGGCCGAAGAGGCGGCCAGTGCACTGGAATAAGATTTC
ACCTGCCAAGATAGAGAAAACTGTGTTTAATGAGATTAATCCAGCTTCAG
TGGTGCTTCCCCTGCAACACCTGAAGGACCATTTTGTAGAGAAACCTAAG
GTGTCAAAGCCCACCAGCTCAGCCAAGGATGGGATGAGAGAAGGGGGACA
AGGGCAGGCTAAGAAGAAAAAGAAGACGATAAATCTTTTGGATGCCAAGA
TGCTTCAGAACAATGGTATCGTCTTCAAGCGCTTTAGGATGGAGCCACAG
GAGCTTTGTGACAAGGTCCTGGGTATGGACCTTAAAGAGCTAGACTCTGA
TAAGCTGGCTGCTCTATGTGCCATTGCCCCAACACTGGACCAGCTTTCTA
CACTCAAGGGTTTTCAGGGGGAGCTCTCTGATTTGGATGATGTCCAGCAG
TTCATGGTACTTACAGCACGCATGCCCCGATACAAGAACCGTCTAGACTG
TCTGACTTTCATGCAGTCCTGTGAAGGATCTGCTAGTCTCATTGATGAGA
AGCTGATTCTGGTCCAAGAAGCGATAATGGGGGTGGGGGAATCCCCCAAG
TTGAAGCGGATTATTGAAGTAGTGCTAGCGATTGGAAACTTCCTGAACGA
GGGCACTCGGAATGGTGATGCCCGTGCCATCAAGCTGGACTCGCTGCTGA
AGCTTAACACGGTCAAGACAACAGACCAGAAGAAGACCCTTCTTCACTTC
TTTTGTGAGTGGGCCAAGAACAATGAGCCACACCTGCTGGATCTGTATCA
AGATGTTGAGAAGTCACAGGAGGCCTCCAGGTGGAGCCTACTGGAACTCA
GGAAGCAGGTGTGA
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