Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 2657 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 2202 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790043.6156785-CDS-C-tenellus_contig7545:11..2066 | 1680790043.6156785-CDS-C-tenellus_contig7545:11..2066 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig7545 12..2066 - |
| 1680790043.6270514-CDS-C-tenellus_contig7545:2805..2952 | 1680790043.6270514-CDS-C-tenellus_contig7545:2805..2952 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig7545 2806..2952 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790043.6386194-UTR-C-tenellus_contig7545:2952..3405 | 1680790043.6386194-UTR-C-tenellus_contig7545:2952..3405 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig7545 2953..3405 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7545.1.2 >prot_C-tenellus_contig7545.1.2 ID=prot_C-tenellus_contig7545.1.2|Name=mRNA_C-tenellus_contig7545.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=734bp
MARTSVENNSASSSVIGGCHPSEEIAIHHVAAGNMQRSHISPEEYYKGRI
QSGLLGKVEGDRRVTLTHPNTLQMAPHTFPLFYHQHHAHRAQMYYGVPRA
QTARAQQQQQQQLHHQQSPLLAYYQYSGASSPSSVPTISPGPQPVTTGHT
PHSSYHPCYGYINLEALEHRAPSAQMEWGVPPTSNARIPSSKATNAPSVS
MLVPPTCAGSTEAFRGGKVSLRGNNVSSGEDDNTNSRGGNSSLGDRLSPL
STKAKAAGAVTTSTSKATIDRKRKLVNHVCQPTLATSLPTAGSSSSSSSS
ICALSSSLPSTPTSTTGAAVAVATAFRQVGGGTAAFTPPYPSAYRNRAVS
RRPTSRRKTEHAHVDMKGSSAACTQLAQPGSPKASAVPQSTSHMTQVCTS
SSSVLVQAPTPTQGKDSAQAPVLECSEAWTTASAEPHVTGPDVKLKTEKA
RSPFGASKDSGHGGLHLLVEAIDLNNSCTGAGGGAQGLSEGEEADCQMQQ
ESNQGPPQVRCQSSVGPSSSSSVSTSSSSFATSVVKIEPKPQALPESVAA
AIVATMALRSDPVSAKKRSASSDEGSLISGAQKVTVSDAGGGRSRGNSTG
GQATQQPLAPLGRLWGAHLPVTSSAYTTTVHPRSAAAPGSMAAAVMTTVP
SGGKMLVGRGNGLFPTMAHPIFSHLTGGFSSQEMLAKAGGNSLDQTGIAL
TAEQSVCREGGLGPWQVQGHCHKQGQGTLGWEAH back to topmRNA from alignment at C-tenellus_contig7545:12..3405- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-tenellus_contig7545.1.2 ID=mRNA_C-tenellus_contig7545.1.2|Name=mRNA_C-tenellus_contig7545.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3394bp|location=Sequence derived from alignment at C-tenellus_contig7545:12..3405- (Choristocarpus tenellus KU2346)
GTTTCTGTAAAAACCATTGTACTGGTCGGTTATCTGATTGGTCGATGAAG
CACCCCAAAACGGATCTGGTCGTGTCTTTAGCTAGAGAAGTGAAAGCAGG
TGTCACATCAAGTACAAAATGAAAGGAAAGGAACTCACCACTATTCCGCA
TTCCCACAAGTGTGCATTTTACGTTTTACGGTAGTGGTAAGAACTACCCC
TTCGTGTAGCAACGTCTTGCACATTGCGGAGGGTTTTGCAAGGATTTTTC
TCTGAAACCTAGGGGGAGAACACAGACCTACCCCTATTCATATGTCATTC
ATCCCAGGAGTGGTTGTCTAGTGGATTGGCGCTTTCTTTCTCCAGGCATT
CATCAGGAAAGATCCTAGAGTGCATCTAATCTCCCCTCTTAAGTACGATA
CGTGGTCGTTCAAGGTGGGGTGGATAGGGTGTGACTCTTTGGTCGAATTC
TCCATGGCCCGCACGTCAGTTGAGAACAATTCCGCTTCCTCTTCGGTCAT
CGGAGGATGTCATCCGTCGGAGGAGATTGCGATTCATCACGTTGCTGCTG
GGAACATGCAGCGGTCCCACATCTCTCCAGAAGAATACTACAAGGGAAGG
GTATGTGATTTGTACCTGTTGACCTGATTACTCCCTACTACTCTTTCCCA
TGCAGGTCCACTAATCCTTAGCGCAAATGAGCCCTGGGGCTTGCTCTGCG
TGCACCTTATTGAAGTTTCTTTTCATTTGGGGTCATCGTAGGTCCACCAT
TTCTGACAATGGCCACAGCGCTTGTCAGCCTCTCCTCTCTGGTTAATTAT
CCCGAATTTCAACATGTCGATGCAATCTCTGTGACATTCTCTTTTGTTGA
GGACCCAATTGTTTTTCAGTGTCATACAAATGGTGCATGGAAACAATGGT
GGAGGTGATGGTGTAGTCAGTCTTCGGCACACCTGATCGACGATGGTTGT
TACTCTGGACGTATTCTTGTTGTCGCATTGTGAGCACCTCTGTCTCAATT
GTATTACAGCTGATATGTCCACCTTGCCCACTCACTTGTTAAGGCTTACT
CGATTAAGATTCATCCACACAAGAATGGCACACTTCCGTCCAAACTTCTC
CCCCAAAATCTAGTGCTGCAGGTGCAGTAGGTAGTGCTATATTAGCAAAG
CATACTCTTTGAACGCATGCTATTAACTGGACATTGGAAAAGTCCCCTCT
TGTCTTGGAAGGTATTGACAAGTCACTCTTGGCCTAGTAACTTGTGATGC
TTCTACAGTCTCAGCGTATTTCCCCAAGTTGGCTCATCTCACCCTTCCCA
CCTGTAACCTTTTCTACCCCTGCTCCCTATATGACACAGATTCAATCTGG
CCTGCTTGGTAAGGTGGAAGGTGATCGGCGCGTGACATTGACGCACCCGA
ATACTTTGCAGATGGCACCTCACACCTTCCCTCTCTTCTACCACCAACAC
CATGCACACCGCGCTCAGATGTACTATGGCGTGCCTCGCGCCCAGACAGC
TCGCGCCCAGCAGCAACAACAACAGCAACTCCACCACCAGCAGTCGCCTT
TGCTTGCATACTATCAGTATTCTGGGGCCTCAAGTCCCTCTTCAGTGCCC
ACCATTTCCCCTGGACCACAGCCTGTCACTACTGGACACACGCCACATTC
ATCCTACCATCCGTGCTATGGATACATTAATTTGGAAGCCTTGGAACATC
GTGCTCCGTCTGCTCAAATGGAATGGGGTGTACCACCCACCTCAAACGCC
CGCATTCCGTCCTCAAAGGCAACTAATGCTCCATCTGTGTCGATGTTGGT
GCCTCCTACTTGTGCTGGTAGCACGGAGGCGTTCAGAGGTGGGAAAGTCT
CACTTCGTGGGAACAATGTCAGCAGCGGGGAAGATGACAACACCAATTCA
AGAGGCGGTAATAGTTCATTGGGTGATCGGCTCTCTCCACTCTCAACCAA
AGCGAAGGCGGCGGGTGCTGTGACAACCTCAACTTCAAAAGCCACTATTG
ATCGCAAGCGAAAGCTGGTGAATCATGTGTGCCAACCAACTCTGGCAACT
TCTCTCCCCACTGCTGGGTCGTCTTCCTCCTCTTCCTCTTCTATATGCGC
TCTGTCTTCATCATTGCCTTCAACTCCAACCTCAACAACAGGTGCCGCTG
TAGCAGTGGCAACGGCCTTCAGGCAGGTAGGAGGGGGTACTGCTGCCTTC
ACCCCCCCCTACCCCTCTGCTTACAGAAACAGGGCAGTAAGTAGGCGACC
CACGAGCAGGAGGAAGACTGAACATGCCCATGTGGACATGAAAGGGAGCT
CGGCTGCATGCACTCAGTTGGCGCAACCTGGATCACCAAAGGCATCTGCT
GTCCCGCAGTCAACCTCTCACATGACCCAGGTGTGCACATCTTCATCTTC
AGTCCTTGTGCAGGCCCCAACCCCAACCCAAGGTAAAGATTCAGCTCAAG
CGCCAGTTCTGGAATGCTCAGAGGCCTGGACCACTGCTTCAGCAGAGCCC
CATGTAACAGGCCCAGATGTGAAGTTAAAGACGGAGAAAGCTCGATCACC
CTTTGGTGCCTCAAAGGACTCAGGCCATGGGGGCTTACACCTATTGGTAG
AAGCTATTGACCTAAACAACAGTTGCACTGGTGCTGGAGGAGGTGCACAG
GGGTTGAGTGAGGGGGAGGAGGCAGACTGTCAAATGCAACAAGAGTCGAA
TCAGGGGCCTCCCCAAGTCAGGTGCCAGTCATCAGTGGGGCCAAGCTCAT
CCTCCTCAGTATCCACTTCCTCTTCTTCCTTTGCTACATCTGTAGTCAAG
ATTGAGCCTAAGCCACAAGCTTTGCCAGAGTCGGTTGCTGCTGCCATTGT
AGCCACCATGGCCTTAAGGTCAGATCCAGTGTCTGCTAAGAAGAGATCAG
CGAGTAGCGATGAAGGGAGCTTGATATCTGGAGCACAAAAGGTGACTGTG
AGTGATGCAGGTGGGGGTAGGAGTAGGGGAAACAGTACAGGAGGACAAGC
GACCCAGCAGCCTTTGGCACCACTGGGTCGACTCTGGGGAGCCCATCTGC
CTGTCACCAGCTCAGCTTACACTACCACTGTCCATCCAAGATCAGCTGCA
GCCCCTGGATCTATGGCTGCGGCAGTTATGACCACAGTGCCATCAGGAGG
CAAGATGCTTGTGGGCAGGGGAAATGGCCTGTTTCCCACCATGGCCCACC
CAATCTTCTCCCATCTAACTGGAGGGTTTTCTAGTCAGGAGATGTTGGCC
AAAGCTGGAGGGAACTCCCTTGACCAAACAGGGATAGCCTTGACAGCCGA
GCAGAGTGTGTGCAGAGAGGGGGGGTTGGGCCCTTGGCAGGTGCAGGGGC
ATTGCCACAAGCAAGGGCAGGGGACTCTTGGGTGGGAAGCACAT back to topCoding sequence (CDS) from alignment at C-tenellus_contig7545:12..3405- >mRNA_C-tenellus_contig7545.1.2 ID=mRNA_C-tenellus_contig7545.1.2|Name=mRNA_C-tenellus_contig7545.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=2202bp|location=Sequence derived from alignment at C-tenellus_contig7545:12..3405- (Choristocarpus tenellus KU2346)
ATGGCCCGCACGTCAGTTGAGAACAATTCCGCTTCCTCTTCGGTCATCGG
AGGATGTCATCCGTCGGAGGAGATTGCGATTCATCACGTTGCTGCTGGGA
ACATGCAGCGGTCCCACATCTCTCCAGAAGAATACTACAAGGGAAGGATT
CAATCTGGCCTGCTTGGTAAGGTGGAAGGTGATCGGCGCGTGACATTGAC
GCACCCGAATACTTTGCAGATGGCACCTCACACCTTCCCTCTCTTCTACC
ACCAACACCATGCACACCGCGCTCAGATGTACTATGGCGTGCCTCGCGCC
CAGACAGCTCGCGCCCAGCAGCAACAACAACAGCAACTCCACCACCAGCA
GTCGCCTTTGCTTGCATACTATCAGTATTCTGGGGCCTCAAGTCCCTCTT
CAGTGCCCACCATTTCCCCTGGACCACAGCCTGTCACTACTGGACACACG
CCACATTCATCCTACCATCCGTGCTATGGATACATTAATTTGGAAGCCTT
GGAACATCGTGCTCCGTCTGCTCAAATGGAATGGGGTGTACCACCCACCT
CAAACGCCCGCATTCCGTCCTCAAAGGCAACTAATGCTCCATCTGTGTCG
ATGTTGGTGCCTCCTACTTGTGCTGGTAGCACGGAGGCGTTCAGAGGTGG
GAAAGTCTCACTTCGTGGGAACAATGTCAGCAGCGGGGAAGATGACAACA
CCAATTCAAGAGGCGGTAATAGTTCATTGGGTGATCGGCTCTCTCCACTC
TCAACCAAAGCGAAGGCGGCGGGTGCTGTGACAACCTCAACTTCAAAAGC
CACTATTGATCGCAAGCGAAAGCTGGTGAATCATGTGTGCCAACCAACTC
TGGCAACTTCTCTCCCCACTGCTGGGTCGTCTTCCTCCTCTTCCTCTTCT
ATATGCGCTCTGTCTTCATCATTGCCTTCAACTCCAACCTCAACAACAGG
TGCCGCTGTAGCAGTGGCAACGGCCTTCAGGCAGGTAGGAGGGGGTACTG
CTGCCTTCACCCCCCCCTACCCCTCTGCTTACAGAAACAGGGCAGTAAGT
AGGCGACCCACGAGCAGGAGGAAGACTGAACATGCCCATGTGGACATGAA
AGGGAGCTCGGCTGCATGCACTCAGTTGGCGCAACCTGGATCACCAAAGG
CATCTGCTGTCCCGCAGTCAACCTCTCACATGACCCAGGTGTGCACATCT
TCATCTTCAGTCCTTGTGCAGGCCCCAACCCCAACCCAAGGTAAAGATTC
AGCTCAAGCGCCAGTTCTGGAATGCTCAGAGGCCTGGACCACTGCTTCAG
CAGAGCCCCATGTAACAGGCCCAGATGTGAAGTTAAAGACGGAGAAAGCT
CGATCACCCTTTGGTGCCTCAAAGGACTCAGGCCATGGGGGCTTACACCT
ATTGGTAGAAGCTATTGACCTAAACAACAGTTGCACTGGTGCTGGAGGAG
GTGCACAGGGGTTGAGTGAGGGGGAGGAGGCAGACTGTCAAATGCAACAA
GAGTCGAATCAGGGGCCTCCCCAAGTCAGGTGCCAGTCATCAGTGGGGCC
AAGCTCATCCTCCTCAGTATCCACTTCCTCTTCTTCCTTTGCTACATCTG
TAGTCAAGATTGAGCCTAAGCCACAAGCTTTGCCAGAGTCGGTTGCTGCT
GCCATTGTAGCCACCATGGCCTTAAGGTCAGATCCAGTGTCTGCTAAGAA
GAGATCAGCGAGTAGCGATGAAGGGAGCTTGATATCTGGAGCACAAAAGG
TGACTGTGAGTGATGCAGGTGGGGGTAGGAGTAGGGGAAACAGTACAGGA
GGACAAGCGACCCAGCAGCCTTTGGCACCACTGGGTCGACTCTGGGGAGC
CCATCTGCCTGTCACCAGCTCAGCTTACACTACCACTGTCCATCCAAGAT
CAGCTGCAGCCCCTGGATCTATGGCTGCGGCAGTTATGACCACAGTGCCA
TCAGGAGGCAAGATGCTTGTGGGCAGGGGAAATGGCCTGTTTCCCACCAT
GGCCCACCCAATCTTCTCCCATCTAACTGGAGGGTTTTCTAGTCAGGAGA
TGTTGGCCAAAGCTGGAGGGAACTCCCTTGACCAAACAGGGATAGCCTTG
ACAGCCGAGCAGAGTGTGTGCAGAGAGGGGGGGTTGGGCCCTTGGCAGGT
GCAGGGGCATTGCCACAAGCAAGGGCAGGGGACTCTTGGGTGGGAAGCAC
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