prot_C-tenellus_contig752.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig752.3.1
Unique Nameprot_C-tenellus_contig752.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length428
Homology
BLAST of mRNA_C-tenellus_contig752.3.1 vs. uniprot
Match: A0A6H5JR91_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR91_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 9.150e-45
Identity = 167/481 (34.72%), Postives = 222/481 (46.15%), Query Frame = 0
Query:    1 QLQAQEALRIVVYLMSHGADAYIVNDIGEDPLSLAARCTAEFPRARKLLVSILDSSRYKADKGALYIEPGNTCLPSLEEEGGVGG----------------------LAPAPPTTISVRGVVYSPSRQRCRQGTEQVRQQNRPLRNLSSAQYSQ----------KRSIVGWRAPNLLNSPSVAPLPVGDHENILGGPQHRLATALTSKGNSLERKCHRLPDLLGTQNTGGQVERGVRKV--PISVFFKEYRLGRNSSVPTKCLGRQMVKSFRGR-RPKSCP------EQLSPEGGGGRSQSERGRLGR--------------------LGAKKGLHPKSSPLNQSIKQRTQAKTSATKSESQR------NQKHEQNVPSVSDMEARAMISSWIRENAKLVSI--PKM------ESFTEGSPHVSFGSRAEIYQALRTIKGDGWGELIPAQNLRTALCTVGQPLETSEMDGLLESGDPAKTG 406
            ++  QEALR+VV+LMSHGADA  VN +GE PL L +R T  FP+ R LL+ ILDSS+Y+   G ++I P N  LPS++EE  V G                               + RGV +SPSR R R+  ++       L  +SSA  S           + S  G R    + +P+   LP GDHE  LGG +HRLA      G    R  H      G    GG   R  R+      V FK+YR+GR+S+V     G   +K +RG  RP SCP      E   P   G R  S     G+                         G            +QR   + SA + +S+R       ++ E+ + S+ D EAR  I  W+RE+A   S   P M      E   E S +V+ G R+++Y+AL+ IKGDG GELI A+ LR  LC VGQPL  +EMD LL+  DP  TG
Sbjct:  258 KIHVQEALRVVVFLMSHGADARAVNHLGETPLDLGSRLTGGFPKFRSLLLPILDSSKYQIAGGTIFIVPAN--LPSVKEE--VTGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARGVTFSPSR-RNRRAKKRYEIAKSRLPYVSSASLSSAAPSFGEGRCRSSSGGGRGG--VTTPA---LPRGDHETALGGARHRLAAG---HGARCSRNDHDGAHGRG----GGGAARECRQAGGASGVHFKDYRMGRSSAVLVSSSGGGGLKRWRGAARPASCPVPGGIDEGRGPGTPGSRVASSATGAGQRXXXXXXXXXXXXXXXXXXXXXXXXGCRGDGGVRVVGTRQRHGGRHSAREEQSERPGARRRREEGERALGSMPDSEARRQIWEWLRESAGTASAVPPAMAHGSGGEILVETSSYVATGRRSDVYRALQAIKGDGRGELISAEKLRAVLCRVGQPLLPNEMDELLQETDPTGTG 721          
BLAST of mRNA_C-tenellus_contig752.3.1 vs. uniprot
Match: D8LM05_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM05_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 6.580e-25
Identity = 102/288 (35.42%), Postives = 134/288 (46.53%), Query Frame = 0
Query:    1 QLQAQEALRIVVYLMSHGADAYIVNDIGEDPLSLAARCTAEFPRARKLLVSILDSSRYKADKGALYIEPGNTCLPSLEEEGG----------------VGGLAPAPPT------------------TISVRGVVYSPSRQRCRQGTEQVRQQNRPLRNLSSAQYSQKRSIVG---WRAPNLLNSPSVAP--LPVGDHENILGGPQHRLATALTSK--GNSLERKCHRLPDLLGTQNTGGQVERGVRKVPISVFFKEYRLGRNSSVPTKCLGRQMVKSFRGR-RPKSCP 246
            ++ AQEALR+VV+LMSHGADA  VN +GE PL L  R T+ FP++R LL+SILDSS+Y+   G ++I P N  LPS++EE                    GL  APP                   T + RGV +SPSR R R+  ++       L  +SSA  S      G    R+ +      VA   LP GDHE  LGG +HRLA    ++   N  +   H                         V FK+YR+GR+S+V         +K  RG  RP SCP
Sbjct:  186 KIHAQEALRVVVFLMSHGADARAVNHLGETPLDLGFRLTSGFPKSRSLLLSILDSSKYQIAGGTIFIVPAN--LPSVKEEATRXXXXXXXXXXXXVARTTGLRGAPPVATAGTAAVXXXXXTTAPKTTTARGVTFSPSR-RNRRAKKRYEIAKSRLPYVSSASLSSAAPSFGEGRCRSSSGGGRGGVATPALPRGDHETALGGARHRLAAGHGARCSRNDHDGGAHGXXXXXXXXXXXXXXXXXXXXXXGGVHFKDYRMGRSSAVLVSGXXXXGLKRGRGTTRPASCP 470          
BLAST of mRNA_C-tenellus_contig752.3.1 vs. uniprot
Match: A0A835YHJ9_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHJ9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.110e-10
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    4 AQEALRIVVYLMSHGADAYIVNDIGEDPLSLAARCTAEFPRARKLLVSILDSSRYKADKGALYIEPGNTCL 74
            A+ AL++VVYLM+ GADA + +  G   L LA R TA +PRA++LLV +LDSS+Y+ +  ALYI P    L
Sbjct:  422 AEGALQLVVYLMARGADARVADGAGRTALDLATRGTAGYPRAQRLLVGVLDSSKYQVEGDALYIVPDEAAL 492          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig752.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JR91_9PHAE9.150e-4534.72PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LM05_ECTSI6.580e-2535.42Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A835YHJ9_9STRA4.110e-1050.70PH domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig752contigC-tenellus_contig752:10681..12792 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig752.3.1mRNA_C-tenellus_contig752.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig752 10681..12792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig752.3.1 ID=prot_C-tenellus_contig752.3.1|Name=mRNA_C-tenellus_contig752.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=428bp
QLQAQEALRIVVYLMSHGADAYIVNDIGEDPLSLAARCTAEFPRARKLLV
SILDSSRYKADKGALYIEPGNTCLPSLEEEGGVGGLAPAPPTTISVRGVV
YSPSRQRCRQGTEQVRQQNRPLRNLSSAQYSQKRSIVGWRAPNLLNSPSV
APLPVGDHENILGGPQHRLATALTSKGNSLERKCHRLPDLLGTQNTGGQV
ERGVRKVPISVFFKEYRLGRNSSVPTKCLGRQMVKSFRGRRPKSCPEQLS
PEGGGGRSQSERGRLGRLGAKKGLHPKSSPLNQSIKQRTQAKTSATKSES
QRNQKHEQNVPSVSDMEARAMISSWIRENAKLVSIPKMESFTEGSPHVSF
GSRAEIYQALRTIKGDGWGELIPAQNLRTALCTVGQPLETSEMDGLLESG
DPAKTGYISCSKVSDILSGERLRPLKDG
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