prot_C-tenellus_contig7464.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7464.1.1
Unique Nameprot_C-tenellus_contig7464.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length248
Homology
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Match: A0A126WUU4_9PHAE (Putative LOV domain-containing protein n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A126WUU4_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 2.190e-24
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    1 QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQFFVAPLWNRNKVVVNYVGVQVPVPGPCLPPDDKT 84
            QV+G NCRFLQGP TD  AVA +RQA+E+  DASV  LN+KADGTPF+NQFFVAPL +    +VNYVG Q  VPGP LPP+  T
Sbjct:  186 QVIGNNCRFLQGPDTDKRAVATVRQAIEKGEDASVCFLNYKADGTPFWNQFFVAPLRDDKNRIVNYVGAQCLVPGP-LPPERPT 268          
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Match: A0A126X4A4_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum thunbergii TaxID=127542 RepID=A0A126X4A4_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.080e-23
Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQFFVAPLWNRNKVVVNYVGVQVPVPGPCLPP 80
            QV+GRNCRFLQGP TD  +VA+IRQA+ +  DA V ++N+KADGTPF+N FFVA L + N  ++NYVG Q P+PGP LPP
Sbjct:  162 QVVGRNCRFLQGPDTDKQSVAIIRQAIGKGEDAHVNLINYKADGTPFWNNFFVAALRDENNRIMNYVGTQCPIPGP-LPP 240          
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Match: F0YKI0_AURAN (PAS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKI0_AURAN)

HSP 1 Score: 101 bits (251), Expect = 2.270e-23
Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQFFVAPLWNRNKVVVNYVGVQVPVPGPCLPPDDK 83
            +V+G+NCRFLQGP T P  VA + + + E  D +VT+LN+K DGTPF+NQ FVA L + NK VVNYVGVQ+PV GP   P D+
Sbjct:   40 EVIGKNCRFLQGPGTFPGTVAELAKGIAEGTDTTVTILNYKKDGTPFWNQLFVASLRDINKRVVNYVGVQIPVAGPLPKPGDE 122          
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Match: A0A126WXM2_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum integerrimum TaxID=1159339 RepID=A0A126WXM2_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.780e-23
Identity = 50/80 (62.50%), Postives = 64/80 (80.00%), Query Frame = 0
Query:    1 QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQFFVAPLWNRNKVVVNYVGVQVPVPGPCLPP 80
            QV+GRNCRFLQGP TD  +VA+IRQA+++  DA V ++N+KADGTPF+N FFVA L + N  ++NYVG Q P+PGP LPP
Sbjct:  451 QVVGRNCRFLQGPDTDKQSVAIIRQAIKKGEDAHVNLINYKADGTPFWNNFFVAALRDENNRIMNYVGAQCPIPGP-LPP 529          
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Match: A0A126X4A9_9PHAE (Putative LOV domain-containing protein n=3 Tax=Sargassum TaxID=3015 RepID=A0A126X4A9_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 3.850e-23
Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQFFVAPLWNRNKVVVNYVGVQVPVPGPCLPP 80
            QV+GRNCRFLQGP TD  +VA+IRQA+ +  DA V ++N+KADGTPF+N FFVA L + N  ++NYVG Q P+PGP LPP
Sbjct:  225 QVVGRNCRFLQGPDTDKQSVAIIRQAIGKGEDAHVNLINYKADGTPFWNNFFVAALRDENNRIMNYVGTQCPIPGP-LPP 303          
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Match: A0A126X3T8_SARHM (Putative LOV domain-containing protein n=1 Tax=Sargassum hemiphyllum TaxID=127544 RepID=A0A126X3T8_SARHM)

HSP 1 Score: 107 bits (266), Expect = 9.200e-23
Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQFFVAPLWNRNKVVVNYVGVQVPVPGPCLPP 80
            QV+GRNCRFLQGP TD  +VA+IRQA+ +  DA V ++N+KADGTPF+N FFVA L + N  ++NYVG Q P+PGP LPP
Sbjct:  413 QVVGRNCRFLQGPDTDKRSVAIIRQAIGKGEDAHVNLINYKADGTPFWNNFFVAALRDENNRIMNYVGTQCPIPGP-LPP 491          
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Match: A0A7S1E2T5_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E2T5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.760e-22
Identity = 47/73 (64.38%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    1 QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQFFVAPLWNRNKVVVNYVGVQVPV 73
            QVLGRNCRFLQGP TDP AV +IR+AV    DA+  +LN+KADG+PF+NQFFVA L + +  +VNYVGVQ  V
Sbjct:   37 QVLGRNCRFLQGPSTDPRAVDIIRKAVASGADATTCILNYKADGSPFWNQFFVAALRDSDNCIVNYVGVQCEV 109          
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Match: A0A836C8A6_9STRA (Aureochrome1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A6_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.970e-22
Identity = 49/70 (70.00%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQFFVAPLWNRNKVVVNYVGVQ 70
            Q+LGRNCRFLQGP+TDP AVA+IR A+E   D SV +LN++ADGT FYNQFFVA L N    VVNYVGVQ
Sbjct:  213 QILGRNCRFLQGPETDPRAVAVIRSAIERGEDTSVCLLNYRADGTTFYNQFFVASLCNGEGKVVNYVGVQ 282          
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Match: A0A1L4A1R1_HETAK (Aureochrome3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A1L4A1R1_HETAK)

HSP 1 Score: 103 bits (256), Expect = 2.610e-22
Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    1 QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQFFVAPLWNRNKVVVNYVGVQVPV 73
            Q+LGRNCRFLQGP TD  AV +IR+ V+E RD SV +LN+KADGTPF+NQFFVAPL + N  +VN+VGVQ  V
Sbjct:  237 QILGRNCRFLQGPGTDRKAVEIIRKGVQEGRDMSVCLLNYKADGTPFWNQFFVAPLRDANDQIVNFVGVQCEV 309          
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Match: A0A7S2CQX5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQX5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.350e-22
Identity = 51/76 (67.11%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQFFVAPLWNRNKVVVNYVGVQVPVPGP 76
            QVLGRNCRFLQGP+TD   V  IR+ +E   D SV +LN+KADGT F+NQFFVA L + NK VVNYVGVQ PVP P
Sbjct:  304 QVLGRNCRFLQGPETDREKVQQIRRGIEHGEDVSVCILNYKADGTTFWNQFFVAALRDVNKRVVNYVGVQCPVPKP 379          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7464.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A126WUU4_9PHAE2.190e-2465.48Putative LOV domain-containing protein n=1 Tax=Pun... [more]
A0A126X4A4_9PHAE1.080e-2362.50Putative LOV domain-containing protein n=1 Tax=Sar... [more]
F0YKI0_AURAN2.270e-2357.83PAS domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A126WXM2_9PHAE2.780e-2362.50Putative LOV domain-containing protein n=1 Tax=Sar... [more]
A0A126X4A9_9PHAE3.850e-2362.50Putative LOV domain-containing protein n=3 Tax=Sar... [more]
A0A126X3T8_SARHM9.200e-2362.50Putative LOV domain-containing protein n=1 Tax=Sar... [more]
A0A7S1E2T5_9STRA1.760e-2264.38Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A836C8A6_9STRA1.970e-2270.00Aureochrome1 n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A1L4A1R1_HETAK2.610e-2267.12Aureochrome3 n=1 Tax=Heterosigma akashiwo TaxID=28... [more]
A0A7S2CQX5_9STRA6.350e-2267.11Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainPFAMPF13426PAS_9coord: 1..70
e-value: 4.8E-6
score: 26.8
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 1..121
e-value: 2.7E-23
score: 84.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..164
NoneNo IPR availablePANTHERPTHR47429PROTEIN TWIN LOV 1coord: 1..72
NoneNo IPR availablePANTHERPTHR47429:SF2PROTEIN TWIN LOV 1coord: 1..72
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 1..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7464contigC-tenellus_contig7464:2142..5197 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7464.1.1mRNA_C-tenellus_contig7464.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7464 623..5197 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7464.1.1 ID=prot_C-tenellus_contig7464.1.1|Name=mRNA_C-tenellus_contig7464.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=248bp
QVLGRNCRFLQGPQTDPSAVALIRQAVEEERDASVTVLNFKADGTPFYNQ
FFVAPLWNRNKVVVNYVGVQVPVPGPCLPPDDKTAGISSIQGQGPHSQQT
EATVVVSKPATSNASKSESLPSEKVVVKSEKSQGLSATVETNPVGSSTLS
VESSPPPQAKSGVDVKSSPYPAAGCRSDLSVVNKETPEEASSCVEGKTRT
MVSSDAMSSSMAPQRAPFAIKTKEVSSTPMTSTMSTVTVVSTGGGAQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf