mRNA_C-tenellus_contig7444.3.3 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7444.3.3
Unique NamemRNA_C-tenellus_contig7444.3.3
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Match: A0A6H5KG20_9PHAE (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG20_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.220e-36
Identity = 63/86 (73.26%), Postives = 71/86 (82.56%), Query Frame = 1
Query:    1 SCIPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTIGGFSGSIGDCADTRRKRTILEGEGILFSGNKVRMHA 258
            S IP GK+STYGG+AKAL S  RAVGGALR NPFAPVVPCHR+V  DLTIGGFSGS GDCADTRRKR +LE EG+ F+ +KV  +A
Sbjct:   23 SGIPAGKISTYGGVAKALNSSARAVGGALRGNPFAPVVPCHRVVMGDLTIGGFSGSFGDCADTRRKRKMLEEEGVRFTNDKVSGNA 108          
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Match: A0A150GKF5_GONPE (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GKF5_GONPE)

HSP 1 Score: 111 bits (278), Expect = 1.410e-28
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 1
Query:    4 CIPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTIGGFSGSIGDCADTR--RKRTILEGEGILFSGNKVR 249
            CIP GKVSTYG +A  L + PRAVG ALRRNPFAP VPCHR+V+ADL IGGFSG  G  AD +  RKR +LEGEGI F+G+ VR
Sbjct:   38 CIPAGKVSTYGAMAAVLKTAPRAVGQALRRNPFAPTVPCHRVVAADLDIGGFSGGWG-IADPKVQRKRQLLEGEGIQFNGSVVR 120          
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Match: A0A383WNP6_TETOB (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WNP6_TETOB)

HSP 1 Score: 111 bits (278), Expect = 1.540e-28
Identity = 52/83 (62.65%), Postives = 66/83 (79.52%), Query Frame = 1
Query:    1 SCIPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTIGGFSGSIG-DCADTRRKRTILEGEGILFSGNKV 246
            S IPKGKVSTYG +AKAL S  RAVG A+RRNPFAP VPCHR+V++ L +GGFSGS G  CA+ +RK+ +L+ EG+ F G+K+
Sbjct:   43 SAIPKGKVSTYGDMAKALSSSARAVGQAMRRNPFAPTVPCHRVVASSLDLGGFSGSWGISCANVQRKKAMLQAEGVQFLGDKI 125          
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Match: A0A8J4BBW3_9CHLO (Methylated-DNA--protein-cysteine methyltransferase n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BBW3_9CHLO)

HSP 1 Score: 110 bits (274), Expect = 5.990e-28
Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 1
Query:    4 CIPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTIGGFSGSIGDCAD-TRRKRTILEGEGILFSGNKVR 249
            CIP GKVSTYG +A  L S PRAVG ALRRNPFAP+VPCHR+V+ADL+IGGFSG+ G      +RK+ +LE EG+ F G+ VR
Sbjct:   36 CIPAGKVSTYGAMASVLKSAPRAVGQALRRNPFAPLVPCHRVVAADLSIGGFSGAWGMAEPKVQRKKRLLEDEGVKFDGSAVR 118          
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Match: A0A836BNC4_9CHLO (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BNC4_9CHLO)

HSP 1 Score: 109 bits (273), Expect = 6.410e-28
Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 1
Query:    4 CIPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTIGGFSGSIG-DCADTRRKRTILEGEGILFSGNKV 246
            CIP GKVSTYG +AK L S PR+VG ALRRNPFAPVVPCHR+V+ADL IGGFSG  G D    +RKR +L+ EG+ F G  V
Sbjct:   33 CIPAGKVSTYGAMAKVLKSSPRSVGQALRRNPFAPVVPCHRVVAADLNIGGFSGGWGIDNPKVQRKRAMLQAEGVPFDGCAV 114          
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Match: A0A2J8A5Z1_9CHLO (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A5Z1_9CHLO)

HSP 1 Score: 108 bits (271), Expect = 9.960e-28
Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = 1
Query:    4 CIPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTIGGFSGSIG-DCADTRRKRTILEGEGILFSGNKVRMHAS 261
            CIP GKVSTYG L+  L S PRAVG ALRRNPFAPVVPCHR+V++D+ IGGFSG  G    + +RKR +LE EGI F G+ VR  A+
Sbjct:   33 CIPAGKVSTYGALSAVLKSSPRAVGQALRRNPFAPVVPCHRVVASDMEIGGFSGGWGVSDPNVQRKRKLLEEEGIEFDGSVVRRTAA 119          
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Match: A0A8J4CIP8_9CHLO (Methylated-DNA--protein-cysteine methyltransferase n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CIP8_9CHLO)

HSP 1 Score: 108 bits (270), Expect = 2.340e-27
Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 1
Query:    4 CIPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTIGGFSGSIGDCAD-TRRKRTILEGEGILFSGNKVR 249
            CIP GKVSTYG +A  L S PRAVG ALRRNPFAP+VPCHR+V+A+L+IGGFSG+ G      +RK+ +LE EGI F G+ VR
Sbjct:   36 CIPAGKVSTYGAMASVLKSAPRAVGQALRRNPFAPLVPCHRVVAANLSIGGFSGAWGMAEPMVQRKKRLLEDEGIKFDGSAVR 118          
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Match: A8J441_CHLRE (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J441_CHLRE)

HSP 1 Score: 107 bits (268), Expect = 2.650e-26
Identity = 53/77 (68.83%), Postives = 59/77 (76.62%), Query Frame = 1
Query:    4 CIPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTIGGFSGSIG-DCADTRRKRTILEGEGILF 231
            CIPKGKVSTYG +A  L S PRAVG ALRRNPF PVVPCHR+V+ADL IGGFSG  G      +RKR +LEGEG+ F
Sbjct:   57 CIPKGKVSTYGAMAIVLESAPRAVGQALRRNPFCPVVPCHRVVAADLNIGGFSGGWGISDPKVQRKRRLLEGEGVSF 133          
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Match: A0A7R9VA33_9CHLO (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VA33_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 4.430e-26
Identity = 49/81 (60.49%), Postives = 62/81 (76.54%), Query Frame = 1
Query:    7 IPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTIGGFSGSIG-DCADTRRKRTILEGEGILFSGNKV 246
            IPKGKV+TYG LAKAL S  RAVG  +RRNPFAP+VPCHR++++DL +GGFSG  G +     RKR++L+ EG+ F G KV
Sbjct:   32 IPKGKVTTYGALAKALSSSARAVGQGMRRNPFAPIVPCHRVIASDLELGGFSGEWGNETKQVCRKRSMLQAEGVKFDGTKV 112          
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Match: A0A8J9REE9_9CHLO (Probable methylated-DNA-protein-cysteine methyltransferase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9REE9_9CHLO)

HSP 1 Score: 103 bits (257), Expect = 1.190e-25
Identity = 52/83 (62.65%), Postives = 61/83 (73.49%), Query Frame = 1
Query:    1 SCIPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTIGGFSGSIG-DCADTRRKRTILEGEGILFSGNKV 246
            S IPKGKVSTYG LA AL S PRAVG ALRRNP+AP VPCHR+V+ DL IGGFSG+         RK+ +LE EG+ F G+K+
Sbjct:   33 SAIPKGKVSTYGALAIALKSSPRAVGQALRRNPYAPQVPCHRVVAHDLKIGGFSGTWDPQSGRVNRKKALLESEGVRFVGDKI 115          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7444.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG20_9PHAE2.220e-3673.26Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A150GKF5_GONPE1.410e-2867.86Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A383WNP6_TETOB1.540e-2862.65Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A8J4BBW3_9CHLO5.990e-2863.86Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A836BNC4_9CHLO6.410e-2865.85Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A2J8A5Z1_9CHLO9.960e-2863.22Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A8J4CIP8_9CHLO2.340e-2763.86Methylated-DNA--protein-cysteine methyltransferase... [more]
A8J441_CHLRE2.650e-2668.83Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A7R9VA33_9CHLO4.430e-2660.49Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A8J9REE9_9CHLO1.190e-2562.65Probable methylated-DNA-protein-cysteine methyltra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7444contigC-tenellus_contig7444:5949..6703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog3055.EDP01091
PFAMsDNA_binding_1
Model size449
Max annot lvl3041|Chlorophyta
KEGG koko:K00567
Hectar predicted targeting categoryother localisation
Exons3
Evalue5.7e-28
EggNOG OGsCOG0350@1|root,KOG4062@2759|Eukaryota,380K7@33090|Viridiplantae,34MDR@3041|Chlorophyta
Ec32 ortholog descriptionputative methylated-DNA--protein-cysteine methyltransferase
Ec32 orthologEc-02_005130.1
EC2.1.1.63
Description6-O-methylguanine DNA methyltransferase, DNA binding domain
Cds size282
COG categoryH
BRITEko00000,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790036.4919722-CDS-C-tenellus_contig7444:5948..60381680790036.4919722-CDS-C-tenellus_contig7444:5948..6038Choristocarpus tenellus KU2346CDSC-tenellus_contig7444 5949..6038 +
1680790036.506421-CDS-C-tenellus_contig7444:6152..62231680790036.506421-CDS-C-tenellus_contig7444:6152..6223Choristocarpus tenellus KU2346CDSC-tenellus_contig7444 6153..6223 +
1680790036.5165665-CDS-C-tenellus_contig7444:6415..65361680790036.5165665-CDS-C-tenellus_contig7444:6415..6536Choristocarpus tenellus KU2346CDSC-tenellus_contig7444 6416..6536 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790036.5275755-UTR-C-tenellus_contig7444:6536..67031680790036.5275755-UTR-C-tenellus_contig7444:6536..6703Choristocarpus tenellus KU2346UTRC-tenellus_contig7444 6537..6703 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7444.3.3prot_C-tenellus_contig7444.3.3Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7444 5949..6536 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7444.3.3

>prot_C-tenellus_contig7444.3.3 ID=prot_C-tenellus_contig7444.3.3|Name=mRNA_C-tenellus_contig7444.3.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=94bp
SCIPKGKVSTYGGLAKALGSCPRAVGGALRRNPFAPVVPCHRIVSADLTI
GGFSGSIGDCADTRRKRTILEGEGILFSGNKVRMHASSQYLTK*
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mRNA from alignment at C-tenellus_contig7444:5949..6703+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7444.3.3 ID=mRNA_C-tenellus_contig7444.3.3|Name=mRNA_C-tenellus_contig7444.3.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=755bp|location=Sequence derived from alignment at C-tenellus_contig7444:5949..6703+ (Choristocarpus tenellus KU2346)
AGTTGTATTCCCAAGGGCAAAGTCTCAACCTACGGTGGTCTGGCGAAGGC TCTTGGCTCATGTCCCAGAGCGGTTGGCGGGGCGCTCAGGGTAAGAAGCC ATCTGTCGTACTGAAAATTTACTTTATTAGGCATTCTCAACGATTGTCGT TTCGTTGATCTAACCGCTTCAGGTGCGTACTTATTGCCCCTTCTCATTGC ACAGAGGAATCCCTTCGCTCCAGTGGTGCCTTGTCATCGTATCGTCAGTG CTGATCTTACTATAGGCGGTTTCAGGTGAGTTAGATGTCTATAATGTGTT GCAGTCCATCGAATCAATCCGATGTTGCTCCAATACTATTGAACGGTGAT TATTTTTGTCTACAAAATAGTGGGCCCTACAATATCGTTTTCCCTTTTTC GAGTTTGAGGAAGAGAATGTCGTGCACTAGTAAGTGTAATATCCTTTCCT TGTGCTGTGGCTCTCAGTGGAAGCATTGGCGACTGTGCTGATACTAGGAG GAAGCGAACAATTTTGGAGGGAGAAGGAATTTTGTTTAGCGGCAACAAGG TGAGGATGCACGCATCTTCTCAATACCTCACGAAGTAATAGCTGCCTAGA TATGTATCATAGGTGTGGTATTCGACTCTTGCTGCACCTCCGCACAACCT ACTTGTTGTGGTTGTGGAGATGCGCATTAAGGGGGGTTTGATTGCAATCA TGGTCTTGACAAGGATTTTGAGTATTTTTTTTCAGCCAAAGTATCTGGGA GGGGG
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Coding sequence (CDS) from alignment at C-tenellus_contig7444:5949..6703+

>mRNA_C-tenellus_contig7444.3.3 ID=mRNA_C-tenellus_contig7444.3.3|Name=mRNA_C-tenellus_contig7444.3.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=282bp|location=Sequence derived from alignment at C-tenellus_contig7444:5949..6703+ (Choristocarpus tenellus KU2346)
AGTTGTATTCCCAAGGGCAAAGTCTCAACCTACGGTGGTCTGGCGAAGGC
TCTTGGCTCATGTCCCAGAGCGGTTGGCGGGGCGCTCAGGAGGAATCCCT
TCGCTCCAGTGGTGCCTTGTCATCGTATCGTCAGTGCTGATCTTACTATA
GGCGGTTTCAGTGGAAGCATTGGCGACTGTGCTGATACTAGGAGGAAGCG
AACAATTTTGGAGGGAGAAGGAATTTTGTTTAGCGGCAACAAGGTGAGGA
TGCACGCATCTTCTCAATACCTCACGAAGTAA
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