prot_C-tenellus_contig7394.1.3 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig7394.1.3
Unique Name	prot_C-tenellus_contig7394.1.3
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	132

Homology

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BLAST of mRNA_C-tenellus_contig7394.1.3 vs. uniprot
Match: A0A6H5L051_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L051_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 5.980e-23
Identity = 60/126 (47.62%), Postives = 84/126 (66.67%), Query Frame = 0

Query:   15 LRGSRENVRGKINRVKQKLRSNDDQELIKKLKGFIMYLRQQDPQFRTEDAMRETLAQGMTAKAAKLKSRLEDIKENPFRNFPDDEEED-----------------SEDMSWGFDKSFYKDEEPGDN 123
            +RG+RE +   +N ++  +RS D+ EL+++LK FIM+LR++DPQF T+DAM E L QG+ + AAKLK +LEDIK+NPFR+   D  ED                 SEDMSWGFD++F+ +E  GDN
Sbjct:   88 IRGNREKIGRAMNSLRDAMRSGDE-ELVERLKAFIMHLRKRDPQFATQDAMDEALEQGLFSTAAKLKLKLEDIKQNPFRHSLLDVSEDGXXXXXXXXXXXDGGDTSEDMSWGFDQTFFGEE--GDN 210

[Close]

BLAST of mRNA_C-tenellus_contig7394.1.3 vs. uniprot
Match: D8LDR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR1_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.960e-20
Identity = 55/124 (44.35%), Postives = 81/124 (65.32%), Query Frame = 0

Query:   15 LRGSRENVRGKINRVKQKLRSNDDQELIKKLKGFIMYLRQQDPQFRTEDAMRETLAQGMTAKAAKLKSRLEDIKENPFRN---------------FPDDEEEDSEDMSWGFDKSFYKDEEPGDN 123
            +RG+RE +   +N ++  +R+ D+ EL ++LK FIM+LR++DPQF T+DAM E L QG+ + AAKLK +LE+I +NPFR+                  D  + SEDMSWGFD++F+ +E  GDN
Sbjct:   43 IRGNREKIGRAMNSLRDAMRTGDE-ELAERLKAFIMHLRKRDPQFATQDAMDEALEQGLFSTAAKLKLKLEEINQNPFRHSLLDVSAEDGXXXXXXXXDGGDTSEDMSWGFDQTFFGEE--GDN 163

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig7394.1.3 vs. uniprot

BLAST of mRNA_C-tenellus_contig7394.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L051_9PHAE	5.980e-23	47.62	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LDR1_ECTSI	1.960e-20	44.35	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 70..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig7394	contig	C-tenellus_contig7394:2884..4353 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig7394.1.3	mRNA_C-tenellus_contig7394.1.3	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig7394 2878..5507 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig7394.1.3 ID=prot_C-tenellus_contig7394.1.3|Name=mRNA_C-tenellus_contig7394.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=132bp
MRYAYSMRVKCSTRLRGSRENVRGKINRVKQKLRSNDDQELIKKLKGFIM
YLRQQDPQFRTEDAMRETLAQGMTAKAAKLKSRLEDIKENPFRNFPDDEE
EDSEDMSWGFDKSFYKDEEPGDNDNGDWNEI*