prot_C-tenellus_contig7334.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7334.2.1
Unique Nameprot_C-tenellus_contig7334.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length154
Homology
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BLAST of mRNA_C-tenellus_contig7334.2.1 vs. uniprot
Match: D7FMW8_ECTSI (Inositol triphosphate receptor (IP3R)/ Ryanodine receptor like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW8_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 8.320e-45
Identity = 90/151 (59.60%), Postives = 110/151 (72.85%), Query Frame = 0 
Query:    5 VGQRVLLLALSEEPDKPPLGYLSSRLLADASDRSSYLPSRCNLDCALSPARTGGDDD-VLEPLVVSDCVFRVEACLDRHESARANLAHRQLEADATNNLGRHPGTRVRYSKMVQLVHEGSDAMVCLDVRERSDGEGFAMRVVLKTFDLPAG 154
            VG+RVLLLALSEE DK PLGYLSSRLL DA  RSS+      LDC+L+  R     +   EP+VVSDCVFRV AC+DRH++ RA+ + R LE   T + G  PGT VRYSK VQLVHE S A++C+DV+ER++ EGFAM+VVLK  D P+G
Sbjct:    4 VGERVLLLALSEERDKHPLGYLSSRLLMDAEGRSSF----ATLDCSLTSFRDAPPAERSWEPVVVSDCVFRVAACVDRHDATRASQSQRNLEPGNTVHRGMQPGTPVRYSKAVQLVHEFSGALLCIDVQERAESEGFAMKVVLKAIDPPSG 150
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BLAST of mRNA_C-tenellus_contig7334.2.1 vs. uniprot
Match: A0A6H5KRP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP3_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 4.840e-10
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:  107 GTRVRYSKMVQLVHEGSDAMVCLDVRERSDGEGFAMRVVLKTFDLPAG 154
            GT VRYSK VQLVHE S A++C+DV++R++ EGFAM+VVLK  D P+G
Sbjct:   11 GTPVRYSKAVQLVHEFSGALLCIDVQKRAEREGFAMKVVLKAIDPPSG 58
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7334.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMW8_ECTSI8.320e-4559.60Inositol triphosphate receptor (IP3R)/ Ryanodine r... [more]
A0A6H5KRP3_9PHAE4.840e-1064.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014821Inositol 1,4,5-trisphosphate/ryanodine receptorPFAMPF08709Ins145_P3_reccoord: 58..147
e-value: 1.3E-7
score: 31.0
NoneNo IPR availableGENE3D2.80.10.50coord: 43..150
e-value: 5.0E-7
score: 30.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7334contigC-tenellus_contig7334:2183..6726 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7334.2.1mRNA_C-tenellus_contig7334.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7334 2183..6726 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7334.2.1 ID=prot_C-tenellus_contig7334.2.1|Name=mRNA_C-tenellus_contig7334.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=154bp
MALCVGQRVLLLALSEEPDKPPLGYLSSRLLADASDRSSYLPSRCNLDCA
LSPARTGGDDDVLEPLVVSDCVFRVEACLDRHESARANLAHRQLEADATN
NLGRHPGTRVRYSKMVQLVHEGSDAMVCLDVRERSDGEGFAMRVVLKTFD
LPAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014821Ins145_P3_rcpt