mRNA_C-tenellus_contig7309.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.910e-31 Identity = 62/134 (46.27%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 25 VEHLSLGTAPFSGQHTYSDVKLWIQK--------VMSEYFSSFMGEDVQPCDVFLAGTIDQGANILNALRELNVPVLTCTAHKLNASVMWALGINGTKETGKNKEGRELVRKGDTMARAFSHSAINHDALHDAQ 402 + + L T F G HT +D++ WI+K + +E+F+ MGE+VQP DVFLA T+DQG N++NA R L+V VL C AH+LN+ MWALGING+ TG+N +L+++ + FSHSA+N+D L D Q Sbjct: 297 ITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQ 430
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 122 bits (306), Expect = 5.670e-30 Identity = 60/132 (45.45%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 7 QGNFSGVEHLSLGTAPFSGQHTYSDVKLWIQKVMSEYFSSFMGEDVQPCDVFLAGTIDQGANILNALRELNVPVLTCTAHKLNASVMWALGINGTKETGKNKEGRELVRKGDTMARAFSHSAINHDALHDAQ 402 +G V ++L T F G HT D+K WI+ + EYF +G VQP DVFL T+DQG NI+NA L VPV+ C H++N++V+WALGI G T KNK +L++K FSHSA+N+D L + Q Sbjct: 117 KGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQ 248
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 123 bits (308), Expect = 5.820e-30 Identity = 58/133 (43.61%), Postives = 86/133 (64.66%), Query Frame = 1 Query: 4 IQGNFSGVEHLSLGTAPFSGQHTYSDVKLWIQKVMSEYFSSFMGEDVQPCDVFLAGTIDQGANILNALRELNVPVLTCTAHKLNASVMWALGINGTKETGKNKEGRELVRKGDTMARAFSHSAINHDALHDAQ 402 ++ + V ++L F G HT D+ WI+++ EYF+ FMGEDV+P DVFLA T+DQG N++NA + L VPV+ C H++N +V+WALGI G +NK +L++K + FSHSA+N+D L + Q Sbjct: 308 VEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR--RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQ 438
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Match: D7G7X8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X8_ECTSI) HSP 1 Score: 113 bits (283), Expect = 4.010e-29 Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 31 HLSLGTAPFSGQHTYSDVKLWIQKVMSEYFSSFMGEDVQPCDVFLAGTIDQGANILNALRELNVPVLTCTAHKLNASVMWALGINGTKETGKNKEGRELVRKGDTMARAFSHSAINHDAL 390 HLSL T F GQHT + +K W++++ + F S + V P DV++A T+DQG N++NA + L +P + C H++++SVMW +G++G+ T KNK+GR LV + A FSHS N DA Sbjct: 59 HLSLATKVFRGQHTQATIKTWLEQLTTGVFQSIVPA-VVPSDVYVAATVDQGLNVVNACKSLGIPTIPCLGHRIHSSVMWGIGVSGSVATQKNKKGRVLVGRCAACAGMFSHSCTNSDAF 177
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.540e-28 Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 34 LSLGTAPFSGQHTYSDVKLWIQKVMSEYFSSFMGEDVQPCDVFLAGTIDQGANILNALRELNVPVLTCTAHKLNASVMWALGINGTKETGKNKEGRELVRKGDTMARAFSHSAINHDALHDAQ 402 ++L F G HT D++ WI+K+ EYFS FMGE VQP DVFLA T+DQG NI+NA L V V+ C H+LN +V+WALGI G N L++K M FSHSA+N+D L + Q Sbjct: 125 IALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQ 245
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.770e-28 Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 34 LSLGTAPFSGQHTYSDVKLWIQKVMSEYFSSFMGEDVQPCDVFLAGTIDQGANILNALRELNVPVLTCTAHKLNASVMWALGINGTKETGKNKEGRELVRKGDTMARAFSHSAINHDALHDAQ 402 ++L F G HT D++ WI+K+ EYFS FMGE VQP DVFLA T+DQG NI+NA L V V+ C H+LN +V+WALGI G N L++K M FSHSA+N+D L + Q Sbjct: 320 IALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQ 440
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 118 bits (296), Expect = 2.100e-28 Identity = 58/126 (46.03%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 25 VEHLSLGTAPFSGQHTYSDVKLWIQKVMSEYFSSFMGEDVQPCDVFLAGTIDQGANILNALRELNVPVLTCTAHKLNASVMWALGINGTKETGKNKEGRELVRKGDTMARAFSHSAINHDALHDAQ 402 V +SL T F G HT D+K WI+ + EYF+ MG V+ DVFLA T+DQG N++NA L VPV+ C H++N++V+WALGI G+ T KNK ++L + FSHSA+N+D L + Q Sbjct: 126 VSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPMKKLA----ALVGVFSHSAVNNDMLKELQ 247
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.870e-27 Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 25 VEHLSLGTAPFSGQHTYSDVKLWIQKVMSEYFSSFMGEDVQPCDVFLAGTIDQGANILNALRELNVPVLTCTAHKLNASVMWALGINGTKETGKNKEGRELVRKGDTMARAFSHSAINHDALHDAQ 402 V +SL T F G HT D+K WI+ + EY + MG V+ DVFLA T+DQG N++NA L VPV+ C H++N++V+WALGI G+ T KNK ++L + FSHSA+N+D L + Q Sbjct: 126 VSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPMKKLA----ALVGVFSHSAVNNDMLKELQ 247
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 111 bits (277), Expect = 5.130e-26 Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 100 KVMSEYFSSFMGEDVQPCDVFLAGTIDQGANILNALRELNVPVLTCTAHKLNASVMWALGINGTKETGKNKEGRELVRKGDTMARAFSHSAINHDALHDAQ 402 ++ +E+F+ MGE+VQP DVFLA T+DQG N++NA R L+V VL C AH+LN+ MWALGING+ TG+N +L+++ + FSHSA+N+D L D Q Sbjct: 2 QLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQ 102
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 4.240e-19 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 100 KVMSEYFSSFMGEDVQPCDVFLAGTIDQGANILNALRELNVPVLTCTAHKLNASVMWALGINGTKETGKNKEGRELVRKGDTMARAFSHSAIN 378 ++ EYF FMGE V+P DVFLA T+DQG N++NA L V V+ C H++N++V+WALGI G+ T +N + L++K + FS SA+N Sbjct: 6 QLTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVN 98 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7309.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7309.1.1 >prot_C-tenellus_contig7309.1.1 ID=prot_C-tenellus_contig7309.1.1|Name=mRNA_C-tenellus_contig7309.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=134bp MIQGNFSGVEHLSLGTAPFSGQHTYSDVKLWIQKVMSEYFSSFMGEDVQPback to top mRNA from alignment at C-tenellus_contig7309:948..1631+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7309.1.1 ID=mRNA_C-tenellus_contig7309.1.1|Name=mRNA_C-tenellus_contig7309.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=684bp|location=Sequence derived from alignment at C-tenellus_contig7309:948..1631+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7309:948..1631+ >mRNA_C-tenellus_contig7309.1.1 ID=mRNA_C-tenellus_contig7309.1.1|Name=mRNA_C-tenellus_contig7309.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=402bp|location=Sequence derived from alignment at C-tenellus_contig7309:948..1631+ (Choristocarpus tenellus KU2346)back to top |