prot_C-tenellus_contig7278.5.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7278.5.1
Unique Nameprot_C-tenellus_contig7278.5.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length125
Homology
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.450e-32
Identity = 61/105 (58.10%), Postives = 73/105 (69.52%), Query Frame = 0
Query:   15 YEQDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHVVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMV 119
            YE DCT+D  WY++WY D LLPA+K  MPWL+ K VVVQQD A+PHTGKGN EIL+ AG   GW    VTQP+ SP LNI +L  F  LK RV G    S++E+V
Sbjct:  260 YEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364          
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: UPI001FB192D6 (uncharacterized protein LOC124891932 n=1 Tax=Capsicum annuum TaxID=4072 RepID=UPI001FB192D6)

HSP 1 Score: 66.6 bits (161), Expect = 1.470e-10
Identity = 41/127 (32.28%), Postives = 72/127 (56.69%), Query Frame = 0
Query:    2 AGRTSKNHKKGDVYE---QDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHVV-VQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVKVIKK 124
            A R SKN   G +     Q  T D    R +  +++LPA++   P     + + +Q+D+A PH GK + E +  A + +G+  R   QPSNSP LN+++LCFFR ++     +  ++V+E+V+ +++
Sbjct:  112 AKRNSKNRTAGTMKTMPFQSVTKDIT--RVFLEEKVLPAIRAKWPASDSNNTIFLQKDNARPHIGKNDLEFIEAA-RQDGFDIRLCFQPSNSPDLNVLDLCFFRGIQSLQYQKAPKNVDELVEAVER 235          
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: W4G9V6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9V6_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.100e-9
Identity = 37/119 (31.09%), Postives = 66/119 (55.46%), Query Frame = 0
Query:    2 AGRTSKNHKKGDVYEQDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHVVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVK 120
            A R S+N   G +      ++   YR++    ++PA+K   P +  KHVV+Q D+ATPH  +  ++ L  +  T+GW+    +QP NSP LN+++L FF  ++         SV+++++
Sbjct:  201 AARNSRNRATGTLVTTLVNVEGELYRDYVMTRVIPAIKACFPSMN-KHVVLQDDNATPH--RVITDELLASVSTDGWTFVVRSQPPNSPDLNVLDLGFFASIQALQYKFESHSVDDVIR 316          
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: A0A1U8EH76_CAPAN (serine/threonine-protein kinase Nek6-like n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A1U8EH76_CAPAN)

HSP 1 Score: 60.8 bits (146), Expect = 1.850e-8
Identity = 30/94 (31.91%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   32 DELLPAVKTMMPWLQGKH-VVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVKVIKK 124
            +++LPA++   P     + + +Q D+A PH G  + E++  AG+   +  R   QPSNSP LN+++LCFFR ++     +  ++V+E+V+ +++
Sbjct:   20 EKVLPAIRAKWPASDSNNPIFLQLDNARPHIGNHDLEVIEAAGQDR-FDIRLCFQPSNSPDLNVLDLCFFRAIQSLQYQKATKNVDELVEAVER 112          
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.120e-7
Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 0
Query:    2 AGRTSKNHKKGDVYEQDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHVVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFF---RYLKYR----VMGEWFRSVEEMVKVIK 123
            A R+S++  KG       T+    Y +   + +LPA+ T  P  + K + +QQD A PH   G  E+++ A    G + + VTQP+NSP LNI++L FF   + L+YR     + E+  +V E    +K
Sbjct:  225 AKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFP-SRWKTLYIQQDGARPHCTDGCPELVASAASF-GLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELK 351          
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: UPI00053FE848 (uncharacterized protein LOC104887828 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FE848)

HSP 1 Score: 52.8 bits (125), Expect = 1.770e-5
Identity = 30/91 (32.97%), Postives = 51/91 (56.04%), Query Frame = 0
Query:   34 LLPAVKTMMPWLQGKHVVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVKVIKK 124
            +L A+ T  P  + K + +QQD+A PH    + E +  A +  G+    V QP NSPKLN++++ +FR L+     E   +V ++V+ + K
Sbjct:  285 VLSAIMTKWPAHRSKVIYIQQDNAKPHVNSRDPEWIV-ASRQNGFEFHLVQQPPNSPKLNLLDVGYFRALQTLQHKERPNTVLKLVQAVNK 374          
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Match: A0A565AP44_9BRAS (Uncharacterized protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565AP44_9BRAS)

HSP 1 Score: 51.2 bits (121), Expect = 6.170e-5
Identity = 28/95 (29.47%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   32 DELLPAVKTMMP---WLQGKHVVVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFFRYLKYRVMGEWFRSVEEMVKVIK 123
            +++LPA++   P   W  GK + +QQD+A  H    + +    A K +G+  + ++QP NSP LNI++L FF  ++        ++VE++++ ++
Sbjct:  321 EKVLPAIREKWPREDW--GKTIFIQQDNARTHVEASDKDFQEAASK-DGFHIQLMSQPPNSPDLNILDLGFFNAIQSLQHKACPKTVEDLIRAVE 412          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7278.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE2.450e-3258.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001FB192D61.470e-1032.28uncharacterized protein LOC124891932 n=1 Tax=Capsi... [more]
W4G9V6_9STRA1.100e-931.09Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A1U8EH76_CAPAN1.850e-831.91serine/threonine-protein kinase Nek6-like n=1 Tax=... [more]
A0A6G0X8U9_9STRA8.120e-733.33Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI00053FE8481.770e-532.97uncharacterized protein LOC104887828 n=2 Tax=Beta ... [more]
A0A565AP44_9BRAS6.170e-529.47Uncharacterized protein n=1 Tax=Arabis nemorensis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..124
e-value: 4.1E-18
score: 67.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..85
NoneNo IPR availablePANTHERPTHR47169OS01G0541250 PROTEINcoord: 2..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7278contigC-tenellus_contig7278:4223..4597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7278.5.1mRNA_C-tenellus_contig7278.5.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7278 3958..5826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7278.5.1 ID=prot_C-tenellus_contig7278.5.1|Name=mRNA_C-tenellus_contig7278.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=125bp
MAGRTSKNHKKGDVYEQDCTLDHLWYREWYTDELLPAVKTMMPWLQGKHV
VVQQDSATPHTGKGNSEILSGAGKTEGWSSRPVTQPSNSPKLNIMELCFF
RYLKYRVMGEWFRSVEEMVKVIKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf