prot_C-tenellus_contig723.2.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig723.2.2
Unique Nameprot_C-tenellus_contig723.2.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length627
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig723.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 481..604
e-value: 9.3E-9
score: 37.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 494..587
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..480
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 520..587
score: 9.934

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig723contigC-tenellus_contig723:4718..10880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig723.2.2mRNA_C-tenellus_contig723.2.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig723 4611..12767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig723.2.2 ID=prot_C-tenellus_contig723.2.2|Name=mRNA_C-tenellus_contig723.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=627bp
MTLPNTNFKSAASFQTISRKRSRWPRCYNDRSECTPLSMHASSWRGAAWI
ARKQFFTPFVGERIYATRKFTSRTTGSTYYTRYLRWDFNRAAELCTVLGL
SALLFTLRSETPAALEVSSTPSIKKLPVTEREAPMPNEGFELALPDGEIA
ISLNIPGLQVLERELRPDGRSWRVLAVDRKEKLVVSIIMEERSVGEKAGN
GGAVPQTSMERLKAYEFRLENSVQCGGRLFCPLVGGHMLEYVVEAEHDGI
SARDTGRWAKGAEDSSAESIPPGTYYGVPSKDLPSREDKPPSLQGQGAED
SKHACQSKSKPLSTGTDAGACNRDGTRSSLKARIVEKSGAKESKMEVITA
GERREENNTCGLRNCSKNVRLFLDVGNVAIDLHLHMSRWSGSPKDDKVLQ
EVLNKLEVLRDFEHSPAQHLALGTYFFYRNRRAERAMPQLAPWTLSRGKG
SEGSINEGRGGRGPGVNVPEGDVAPPGEASRTVSTQKEDMKQSLRHFRQG
YETAKRMPQGERGLREEEWRSLVNHYGVLASSQEGLDRAAEVFEGAVIED
PHHPTFRYNLSCVYAEMGRREDMLRELETALTLRYRQADSERQQMADPLK
DLAFRNFWRDPKLLRLVDLHLRSVSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom