prot_C-tenellus_contig7125.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7125.1.1
Unique Nameprot_C-tenellus_contig7125.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length439
Homology
BLAST of mRNA_C-tenellus_contig7125.1.1 vs. uniprot
Match: D7FH23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH23_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 2.800e-30
Identity = 149/462 (32.25%), Postives = 189/462 (40.91%), Query Frame = 0
Query:    2 PTIDIKLELQMRGVEHRDTFEKSDLINRLAEARAKAARGSVSGPAD-----------------------ASQDQKEGSERRWL--------------------------DDNTKDRFARDVARAKALGTEAAIRELNAMGVPHSRLSDLSVLANQYAIGRREARKDDEENRRF----------------------------RRDKGKVLDPKGGFTDGNGGLEGEERSQKGRRWERWIPSRQTWEFNER----DNDENVGEGTDGSEWEEKWRRNGYQWERGEMTEDSDIQT----RELSGSQPTQR-----PHDPKRALPLRVQASRMTSRELMSELDSMKVLYPIPSSRSELQHLFIMS---------KNNNSTNGGGDDMGRSGAVVSEEDYGRAEESLSEYDSLSFRTFESALRWARQLTYGDVINELECRGVAFKPNADYSFLTRLLADSVIVDESM 364
            PTIDIKLELQMRGVEHRD FEK+DL  RLAEAR  +   + S   D                       A+   +E + R                             D  +   +ARDVAR   +G  A  RELN MG+ HSRLSDLSVLA QYA  R+EAR+D    RRF                                           +G G   G +R+  G  W             E     D D  +G G                  R ++ ED   +T    R  +GS  T         +  R   L  +A RM+SRELM  LD +   Y IP+ R+ELQ  F+ +            ++T       G++   VS  D    E       +  F T+ SALRWARQL + DV++EL  RGV   P ADYS+LTRLLAD V+ DE +
Sbjct:  141 PTIDIKLELQMRGVEHRDAFEKADLARRLAEARVSSCGNNPSPSPDXXXXXXXXXXXXXXXAGRDFGGAAADGPRENAHRSNKASTMMGNEPQAAAATAVATEGRGAAPDGGSNRAYARDVARGTRMGKAALARELNGMGIAHSRLSDLSVLARQYAARRQEARED---ARRFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGWGDARG-QRAASGLPWRFGKEEXXXXXXXEAAGVGDADFPLGGGG-----------------RDDVGEDGRSETGWSTRANAGSAATADGXGGGDKERSRKAVLHARADRMSSRELMKALDGLGARYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAAAGTRGKNIVAVSPYDTPIEEGDGGLRGTQGFGTYHSALRWARQLNFDDVLDELRYRGVEQSPRADYSYLTRLLADEVLADEEL 581          
BLAST of mRNA_C-tenellus_contig7125.1.1 vs. uniprot
Match: A0A6H5JDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDP5_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.220e-29
Identity = 134/418 (32.06%), Postives = 173/418 (41.39%), Query Frame = 0
Query:    1 MPTIDIKLELQMRGVEHRDTFEKSDLINRLAEARAKAARGSVS--------------------------GPADASQDQKEGS-----------------ERRWL--DDNTKDRFARDVARAKALGTEAAIRELNAMGVPHSRLSDLSVLANQYAIGRREARKDDEENRRFRRDKGKVLDPKGGFTDGNGGLEGEERSQKGRRWERWIPSRQTWEFNERDNDENVGEGTDGSEWEEKWRRNGYQWERGEMTEDSDIQTRELSGSQPTQRPHDPKRALPLRVQASRMTSRELMSELDSMKVLYPIPSSRSELQHLFIMS---------KNNNSTNGGGDDMGRSGAVVSEEDYGRAEESLSEYDSLSFRTFESALRWARQLTYGDVINELECRGVAFKPNADYSFLTRLLADSVIVDESM 364
            +PTIDIKLELQMRGVEHRD FEK+DL  RLAEAR      + S                          GP +++    + S                 E R    D  +   +ARDVAR   +G  A  RELN MG+ HSRLSD+SVLA QYA  R+EAR+D    RRF         P     DG+  +                                             W                     ++  S          R   L  +A R++SRELM  LD++   Y IP+ R+ELQ  F+ +            ++T       G +   VS  D    E       +  F T+ SALRWARQL + DV++EL+ RGV   P ADYS+LTRLLAD V+ DE +
Sbjct:  132 VPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVSCCGNNPSPSHDXXXXXXXXXXXXXXXLGGAAAHGPRESAHRSNKASTTTGNEPQAAAATAVPTEGRGAASDGCSSSAYARDVARGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAARRQEARED---ARRF---------PPSSALDGS--ISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGWSTRANXXXXXXXXXXXXXXXXDMERS----------RKAALHARADRLSSRELMKALDALGAQYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAASGSRGENIVPVSPYDAPLEEGDGGLRGTQGFGTYHSALRWARQLNFDDVLDELKYRGVEHSPRADYSYLTRLLADEVLADEEL 525          
BLAST of mRNA_C-tenellus_contig7125.1.1 vs. uniprot
Match: A0A836CCS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS4_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.650e-9
Identity = 47/109 (43.12%), Postives = 57/109 (52.29%), Query Frame = 0
Query:    1 MPTIDIKLELQMRGVEHRDTFEKSDLINRLAEARAKAARGSVSGPADASQDQKEGSERRWLDDNTKDRFARDVARAKALGTEAAIRELNAMGVPHSRLSDLSVLANQYA 109
            MPTIDIKLELQMRG++HRD  EK +L  RLA+ARA  A+  VS   D S                     R  A+A  +G     R L  MG+P S+L+D   LA  YA
Sbjct:   85 MPTIDIKLELQMRGIDHRDALEKQELARRLAQARASQAQP-VSVATDPS-------------------IERAAAKAMEMGEGGLRRALRDMGIPFSQLADAPELARLYA 173          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7125.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FH23_ECTSI2.800e-3032.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDP5_9PHAE1.220e-2932.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCS4_9STRA3.650e-943.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7125contigC-tenellus_contig7125:5188..6675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7125.1.1mRNA_C-tenellus_contig7125.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7125 5158..6746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7125.1.1 ID=prot_C-tenellus_contig7125.1.1|Name=mRNA_C-tenellus_contig7125.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=439bp
MPTIDIKLELQMRGVEHRDTFEKSDLINRLAEARAKAARGSVSGPADASQ
DQKEGSERRWLDDNTKDRFARDVARAKALGTEAAIRELNAMGVPHSRLSD
LSVLANQYAIGRREARKDDEENRRFRRDKGKVLDPKGGFTDGNGGLEGEE
RSQKGRRWERWIPSRQTWEFNERDNDENVGEGTDGSEWEEKWRRNGYQWE
RGEMTEDSDIQTRELSGSQPTQRPHDPKRALPLRVQASRMTSRELMSELD
SMKVLYPIPSSRSELQHLFIMSKNNNSTNGGGDDMGRSGAVVSEEDYGRA
EESLSEYDSLSFRTFESALRWARQLTYGDVINELECRGVAFKPNADYSFL
TRLLADSVIVDESMNPEYQGKAMLRGKISPDPVSSLTERGHIFDQLVQTE
TSTTDNATLVREILTMKCFGNGEEVCMYFDMLSMLNIT*
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