prot_C-tenellus_contig7123.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7123.1.1
Unique Nameprot_C-tenellus_contig7123.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length147
Homology
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Match: D7G4F2_ECTSI (5'-3' exoribonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F2_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 1.440e-81
Identity = 132/146 (90.41%), Postives = 136/146 (93.15%), Query Frame = 0
Query:    1 MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKNMGHKV 146
            MGVPAFYRWLSEKYPKIVVD+LED   R  GTEIPLDL   NPNG+EFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDY+DRLFSAVRPRRLLY+AIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMK MG KV
Sbjct:    1 MGVPAFYRWLSEKYPKIVVDMLEDHAARVEGTEIPLDLTAENPNGIEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYIDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGVKV 146          
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Match: A0A6H5JF35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF35_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 5.780e-79
Identity = 132/146 (90.41%), Postives = 136/146 (93.15%), Query Frame = 0
Query:    1 MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKNMGHKV 146
            MGVPAFYRWLSEKYPKIVVD+LED   R  GTEIPLDL   NPNG+EFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDY+DRLFSAVRPRRLLY+AIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMK MG KV
Sbjct:    1 MGVPAFYRWLSEKYPKIVVDMLEDHAARVDGTEIPLDLTAENPNGIEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYIDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKV 146          
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Match: A0A7S1UB78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB78_9STRA)

HSP 1 Score: 212 bits (540), Expect = 3.510e-64
Identity = 103/146 (70.55%), Postives = 122/146 (83.56%), Query Frame = 0
Query:    1 MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKNMGHKV 146
            MGVPAFYRWLSE+YPKI+VD++E KPV     ++PLD   PNPN +EFDNLY+DMNGIIHPCSHPED+PPP +EEEM++N+  YVDRLF+AVRPR+LL++AIDGVAPRAKMNQQRSRRF+S +E  E  E MEE RQ M  MG KV
Sbjct:   17 MGVPAFYRWLSERYPKIIVDMIEAKPV---DPDVPLDTTTPNPNSIEFDNLYVDMNGIIHPCSHPEDRPPPRNEEEMFRNVCYYVDRLFAAVRPRKLLFLAIDGVAPRAKMNQQRSRRFKSVKEMREGQEAMEEVRQDMMAMGLKV 159          
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Match: A0A7C8Z1Q6_OPUST (XRN_N domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8Z1Q6_OPUST)

HSP 1 Score: 202 bits (515), Expect = 2.610e-63
Identity = 96/146 (65.75%), Postives = 120/146 (82.19%), Query Frame = 0
Query:    1 MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKNMGHKV 146
            MGVPAFYRWL+EKYP IVVDV+E++PV   G EIP+D  +PNPN +E+DNLY+DMNGIIHPC HPED+P P + +E+++N+ DY+DRLF+ VRPR+LLYMAIDGVAPRAKMNQQRSRRFR+A++A EAA   E  R   +  G K+
Sbjct:    1 MGVPAFYRWLAEKYPLIVVDVVEEEPVVVDGVEIPVDTSKPNPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTTFDEVFQNVFDYIDRLFNMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAAEAAAEEERLRHEFEQEGRKL 146          
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Match: E1ZGU2_CHLVA (XRN_N domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGU2_CHLVA)

HSP 1 Score: 201 bits (512), Expect = 8.930e-62
Identity = 95/146 (65.07%), Postives = 118/146 (80.82%), Query Frame = 0
Query:    1 MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKNMGHKV 146
            MGVP++YRWLS++YPK+V DV+ED+     G E+P+D  QPNPNG+EFDNLY+DMNGIIHPC HPED+P P +E+E++  + DY+DRLF+ VRPR+LLYMAIDGVAPRAKMNQQRSRRFR+AQEAEE  +  E+ R      G KV
Sbjct:    1 MGVPSYYRWLSQRYPKVVKDVVEDEVQVINGVEVPVDTSQPNPNGLEFDNLYLDMNGIIHPCFHPEDRPAPTTEQEVFTTMFDYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAQEAEEREKEEEKLRDEFAKQGIKV 146          
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Match: A0A1S0UKX8_LOALO (XRN_N domain-containing protein n=1 Tax=Loa loa TaxID=7209 RepID=A0A1S0UKX8_LOALO)

HSP 1 Score: 195 bits (495), Expect = 2.040e-61
Identity = 91/144 (63.19%), Postives = 117/144 (81.25%), Query Frame = 0
Query:    1 MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKNMGH 144
            MGVPAF+RWL+ KYP ++VD +E+KP    G  IP++   PNPN  EFDNLY+DMNGIIHPC+HPED+P P++EEEM+  I +Y+DRLF+ VRPR+LLYMAIDGVAPRAKMNQQRSRRFR+++EA E  E + ETR  +++ G+
Sbjct:    1 MGVPAFFRWLTRKYPSVIVDAVEEKPRDMNGVRIPVNTVDPNPNFQEFDNLYLDMNGIIHPCTHPEDRPSPKTEEEMFTLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEAIEKVEQIAETRSRLESEGY 144          
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Match: A0A0D2JDS0_9CHLO (5'-3' exoribonuclease 2 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JDS0_9CHLO)

HSP 1 Score: 202 bits (513), Expect = 2.100e-61
Identity = 97/143 (67.83%), Postives = 113/143 (79.02%), Query Frame = 0
Query:    1 MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKNMG 143
            MGVPAFYRWLSEKYPKI+VDV E+ P    G E+P+D   PNPNG+EFDNLY+DMNGIIHPC HPED+P P +E E++ NI DY+DRLF+ VRPR++LYMAIDGVAPRAKMNQQRSRRFR+AQE EE     E  R+     G
Sbjct:    1 MGVPAFYRWLSEKYPKIIVDVKEELPEWINGVEVPVDTSTPNPNGIEFDNLYLDMNGIIHPCFHPEDRPAPTTEREVFLNIFDYIDRLFAMVRPRKVLYMAIDGVAPRAKMNQQRSRRFRAAQEMEEKEAEEERLREEFARQG 143          
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Match: A0A2K3K4C9_TRIPR (5'-3' exoribonuclease 3-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K4C9_TRIPR)

HSP 1 Score: 193 bits (491), Expect = 3.570e-61
Identity = 88/128 (68.75%), Postives = 112/128 (87.50%), Query Frame = 0
Query:    1 MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSAQEAEEA 128
            MGVPAFYRWL+EKYP ++VD +E++PV   G EIP+DL +PNPN +E+DNLY+DMNGIIHPC HPED+P P S EE+++ + DY+DRLF+ VRPR+LL+MAIDGVAPRAKMNQQRSRRFR+A++A +A
Sbjct:    1 MGVPAFYRWLAEKYPMVIVDAVEEEPVVIEGVEIPIDLSKPNPNNLEYDNLYLDMNGIIHPCFHPEDRPSPTSFEEVFECMFDYIDRLFNMVRPRKLLFMAIDGVAPRAKMNQQRSRRFRAAKDAADA 128          
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Match: A0A1D6MQ08_MAIZE (5'-3' exoribonuclease 3 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6MQ08_MAIZE)

HSP 1 Score: 192 bits (489), Expect = 9.330e-61
Identity = 88/132 (66.67%), Postives = 112/132 (84.85%), Query Frame = 0
Query:    1 MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELM 132
            MGVPAFYRWL+EKYP +VVDV+E++PV   G ++P+D  +PNPN +EFDNLY+DMNGIIHPC HPED+P P +  E+++ + DY+DRLF  VRPRRLLYMAIDGVAPRAKMNQQRSRRFR+A++A +A  ++
Sbjct:    1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIHPCFHPEDRPSPTTFGEVFQCMFDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAVSIL 132          
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Match: A0A482S7U6_9ARCH (XRN_N domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7U6_9ARCH)

HSP 1 Score: 197 bits (500), Expect = 1.290e-60
Identity = 94/143 (65.73%), Postives = 119/143 (83.22%), Query Frame = 0
Query:    1 MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYMAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKNMG 143
            MGVPAF+RW++EKY KI+ +VLE +PV   GT  PL+L +PNP G+EFDNLY+DMNG+IHPCSHPED+  P++EEEMY N+  YVDRL +A+RPRRLLY+AIDGVAPRAKMNQQRSRRFR+AQE  E  E+ E+  + M+++G
Sbjct:   56 MGVPAFFRWITEKYGKILQEVLEKRPVIIDGTVFPLNLTEPNPIGIEFDNLYVDMNGLIHPCSHPEDREAPKTEEEMYDNVCLYVDRLVAAIRPRRLLYLAIDGVAPRAKMNQQRSRRFRAAQEMREKREIKEQVLREMQDLG 198          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7123.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4F2_ECTSI1.440e-8190.415'-3' exoribonuclease n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JF35_9PHAE5.780e-7990.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1UB78_9STRA3.510e-6470.55Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7C8Z1Q6_OPUST2.610e-6365.75XRN_N domain-containing protein (Fragment) n=1 Tax... [more]
E1ZGU2_CHLVA8.930e-6265.07XRN_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A1S0UKX8_LOALO2.040e-6163.19XRN_N domain-containing protein n=1 Tax=Loa loa Ta... [more]
A0A0D2JDS0_9CHLO2.100e-6167.835'-3' exoribonuclease 2 n=1 Tax=Monoraphidium negl... [more]
A0A2K3K4C9_TRIPR3.570e-6168.755'-3' exoribonuclease 3-like protein n=1 Tax=Trifo... [more]
A0A1D6MQ08_MAIZE9.330e-6166.675'-3' exoribonuclease 3 n=1 Tax=Zea mays TaxID=457... [more]
A0A482S7U6_9ARCH1.290e-6065.73XRN_N domain-containing protein n=1 Tax=archaeon T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..145
NoneNo IPR availableGENE3D3.40.50.12390coord: 1..136
e-value: 2.2E-49
score: 170.3
NoneNo IPR availablePANTHERPTHR12341:SF535'-3' EXORIBONUCLEASEcoord: 1..144
IPR004859Putative 5-3 exonucleasePFAMPF03159XRN_Ncoord: 1..140
e-value: 2.3E-49
score: 168.0
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 1..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7123contigC-tenellus_contig7123:73..2376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7123.1.1mRNA_C-tenellus_contig7123.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7123 73..2376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7123.1.1 ID=prot_C-tenellus_contig7123.1.1|Name=mRNA_C-tenellus_contig7123.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=147bp
MGVPAFYRWLSEKYPKIVVDVLEDKPVRAGGTEIPLDLEQPNPNGMEFDN
LYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYVDRLFSAVRPRRLLYM
AIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKNMGHKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004859Put_53exo
IPR0270735_3_exoribonuclease