prot_C-tenellus_contig6997.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig6997.2.1
Unique Name	prot_C-tenellus_contig6997.2.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	105

Homology

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BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Match: A0A2K3M0R7_TRIPR (Mitotic checkpoint protein BUB3 n=2 Tax=Trifolium TaxID=3898 RepID=A0A2K3M0R7_TRIPR)

HSP 1 Score: 112 bits (280), Expect = 5.410e-30
Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 0

Query:    2 LGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGALLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTSGTLLT 105
            L +PP+DG+S++ F+ H D LL SSWD T+RLYDA  NV +  F   G +LDCCF   +SGF    D TV+ +   TG E  LG+HD  VRCVEY   +G LLT
Sbjct:   12 LANPPSDGISNIRFSNHSDNLLVSSWDKTVRLYDATANVLRGEFLHGGPVLDCCFHDDSSGFSASADNTVRRLVFATGKEDILGKHDAPVRCVEYSYAAGFLLT 115

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BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Match: A0A4Y7K1Y8_PAPSO (Uncharacterized protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7K1Y8_PAPSO)

HSP 1 Score: 118 bits (295), Expect = 6.590e-30
Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 0

Query:    2 LGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGALLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTSGTLLT 105
            L DPP+DG++++ F+ H D LL SSWD ++RLYDA +NV + VF    A+LDCCF   +SGF  GLD TV+  D  +G E  LGRHD  VRCVEY  ++G L+T
Sbjct:   14 LTDPPSDGITNLRFSNHSDHLLVSSWDKSVRLYDAGENVLRGVFNHGSAILDCCFHDDSSGFTAGLDHTVRRDDFSSGKEDILGRHDAPVRCVEYSYSAGQLIT 117

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BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Match: Q10IP1_ORYSJ (Mitotic checkpoint protein BUB3, putative, expressed n=3 Tax=Poaceae TaxID=4479 RepID=Q10IP1_ORYSJ)

HSP 1 Score: 114 bits (284), Expect = 4.320e-29
Identity = 54/104 (51.92%), Postives = 68/104 (65.38%), Query Frame = 0

Query:    2 LGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGALLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTSGTLLT 105
            L +PPTDG+S++ F+ H D LL SSWD T+RLYDA  NV K  F   GA+LDCCF   +SGF  G D TV+ +   +  E  LGRHD  VRCVEY   +G ++T
Sbjct:   17 LANPPTDGISNLRFSNHSDHLLVSSWDKTVRLYDADANVLKGEFVHAGAVLDCCFHDDSSGFSAGADHTVRRLVFGSAKEDLLGRHDAPVRCVEYSYAAGQVIT 120

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BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Match: A0A8J5SBI1_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SBI1_ZIZPA)

HSP 1 Score: 109 bits (272), Expect = 1.060e-28
Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 0

Query:    2 LGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGALLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTSGTLLT 105
            L  PPTDG+S++ F+ H D LL SSWD T+RLYDA  NV K  F   GA+LDCCF   +SGF  G D TV+ +   +  E  LG+HD  V CVEY   +G ++T
Sbjct:   16 LAYPPTDGISNLRFSNHSDHLLVSSWDKTVRLYDADANVLKGEFVHPGAVLDCCFHDDSSGFSAGADHTVRRLVFSSSKEDVLGQHDAPVSCVEYSYAAGQVIT 119

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BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Match: M8B3S1_TRIUA (Mitotic checkpoint protein BUB3 n=5 Tax=Triticinae TaxID=1648030 RepID=M8B3S1_TRIUA)

HSP 1 Score: 112 bits (280), Expect = 1.460e-28
Identity = 52/104 (50.00%), Postives = 67/104 (64.42%), Query Frame = 0

Query:    2 LGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGALLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTSGTLLT 105
            L  PP+DG+S++ F+ H D LL SSWD T+RLYDA  N+ K  FA  G +LDCCF   +SGF  G D TV+ +   +  E  LGRHD  VRCVEY   +G ++T
Sbjct:   18 LATPPSDGISNLRFSNHSDHLLVSSWDKTVRLYDAEANLLKGEFAHPGPVLDCCFHDDSSGFSAGADHTVRRLSFTSSKEDVLGRHDAPVRCVEYSYAAGQVIT 121

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BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Match: B8B805_ORYSI (Uncharacterized protein n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=B8B805_ORYSI)

HSP 1 Score: 112 bits (280), Expect = 2.230e-28
Identity = 52/104 (50.00%), Postives = 68/104 (65.38%), Query Frame = 0

Query:    2 LGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGALLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTSGTLLT 105
            L +PP+DGVSS+ F+ H D LL SSWD T+RLYDA  NVP+ VF    ++L CCF   +SGF    D TV+ +   +G    LGRHD AV CVEY  ++G ++T
Sbjct:   28 LREPPSDGVSSLRFSKHSDRLLVSSWDKTVRLYDAEANVPRGVFMHAASVLGCCFHDDSSGFSASADNTVRRLAFSSGGNYFLGRHDAAVSCVEYSYSTGQVIT 131

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BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Match: A0A175YDN8_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YDN8_DAUCS)

HSP 1 Score: 114 bits (284), Expect = 2.670e-28
Identity = 54/104 (51.92%), Postives = 67/104 (64.42%), Query Frame = 0

Query:    2 LGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGALLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTSGTLLT 105
            L DPP DG+SS+ F+ H D LL SSWD T+RLYDAR +V +  F   GA+LDCCFQ    GF GG D TV+ +      E  LG+HD  VRCVEY   +G ++T
Sbjct:   12 LKDPPADGISSLTFSSHSDNLLVSSWDKTVRLYDARSDVLRGEFRHGGAVLDCCFQDDFVGFSGGADHTVRRLVFNNEKEDVLGKHDSPVRCVEYSNATGQVIT 115

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BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Match: A0A3B6IVH0_WHEAT (Uncharacterized protein n=20 Tax=Poaceae TaxID=4479 RepID=A0A3B6IVH0_WHEAT)

HSP 1 Score: 113 bits (282), Expect = 2.930e-28
Identity = 52/104 (50.00%), Postives = 68/104 (65.38%), Query Frame = 0

Query:    2 LGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGALLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTSGTLLT 105
            L +PP+DG+S++ F+ H D LL SSWD T+RLYDA  N+ K  FA  G +LDCCF   +SGF  G D TV+ +   +  E  LGRHD  VRCVEY   +G ++T
Sbjct:   18 LANPPSDGISNLRFSNHSDHLLVSSWDKTVRLYDAEANLLKGEFAHPGPVLDCCFHDDSSGFSAGADHTVRRLSFTSSKEDVLGRHDAPVRCVEYSYAAGQVIT 121

[Close]

BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Match: A0A8J5WWH9_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WWH9_ZIZPA)

HSP 1 Score: 112 bits (281), Expect = 4.040e-28
Identity = 52/104 (50.00%), Postives = 68/104 (65.38%), Query Frame = 0

Query:    2 LGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGALLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTSGTLLT 105
            L +PP+DG+S++ F+ H D LL SSWD T+RLYDA  NV K  F   GA+LDCCF   +SGF  G D TV+ +   +  E  LGRHD  VRC+EY   +G ++T
Sbjct:   17 LANPPSDGISNLRFSNHSDHLLVSSWDKTVRLYDADANVLKGEFVHPGAVLDCCFHDDSSGFSAGADHTVRRLVFSSAKEDVLGRHDAPVRCIEYSYAAGQVIT 120

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BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Match: A0A453IMK5_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453IMK5_AEGTS)

HSP 1 Score: 110 bits (275), Expect = 4.310e-28
Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = 0

Query:    2 LGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGALLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTSGT 102
            L +PP+DG+S++ F+ H D LL SSWD T+RLYDA  ++ K  FA  G +LDCCF   +SGF  G D TV+ +   +  E  LGRHD  VRCVEY   +GT
Sbjct:   66 LANPPSDGISNLRFSNHSDHLLVSSWDKTVRLYDAEASLLKGEFAHPGPVLDCCFHDDSSGFSAGADHTVRRLSFTSSKEDVLGRHDAPVRCVEYSYAAGT 166

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig6997.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2K3M0R7_TRIPR	5.410e-30	50.96	Mitotic checkpoint protein BUB3 n=2 Tax=Trifolium ...	[more]
A0A4Y7K1Y8_PAPSO	6.590e-30	52.88	Uncharacterized protein n=3 Tax=Papaver somniferum...	[more]
Q10IP1_ORYSJ	4.320e-29	51.92	Mitotic checkpoint protein BUB3, putative, express...	[more]
A0A8J5SBI1_ZIZPA	1.060e-28	50.00	Uncharacterized protein n=1 Tax=Zizania palustris ...	[more]
M8B3S1_TRIUA	1.460e-28	50.00	Mitotic checkpoint protein BUB3 n=5 Tax=Triticinae...	[more]
B8B805_ORYSI	2.230e-28	50.00	Uncharacterized protein n=1 Tax=Oryza sativa subsp...	[more]
A0A175YDN8_DAUCS	2.670e-28	51.92	Uncharacterized protein n=1 Tax=Daucus carota subs...	[more]
A0A3B6IVH0_WHEAT	2.930e-28	50.00	Uncharacterized protein n=20 Tax=Poaceae TaxID=447...	[more]
A0A8J5WWH9_ZIZPA	4.040e-28	50.00	Uncharacterized protein n=1 Tax=Zizania palustris ...	[more]
A0A453IMK5_AEGTS	4.310e-28	50.50	Uncharacterized protein n=1 Tax=Aegilops tauschii ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 2..35 e-value: 0.49 score: 19.0 coord: 38..75 e-value: 45.0 score: 6.6
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 9..35 e-value: 4.1E-5 score: 24.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 10..44 score: 8.737
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..105 e-value: 5.9E-21 score: 76.8
None	No IPR available	PANTHER	PTHR10971:SF5	MITOTIC CHECKPOINT PROTEIN BUB3	coord: 4..105
None	No IPR available	PANTHER	PTHR10971	MRNA EXPORT FACTOR AND BUB3	coord: 4..105
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 3..44 score: 8.597
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 6..104

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig6997	contig	C-tenellus_contig6997:787..2264 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig6997.2.1	mRNA_C-tenellus_contig6997.2.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig6997 787..2264 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig6997.2.1 ID=prot_C-tenellus_contig6997.2.1|Name=mRNA_C-tenellus_contig6997.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=105bp
MLGDPPTDGVSSVCFAPHGDLLLASSWDSTLRLYDARQNVPKKVFAGRGA
LLDCCFQSMASGFCGGLDKTVKMIDLETGTERALGRHDRAVRCVEYDMTS
GTLLT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR036322	WD40_repeat_dom_sf