prot_C-tenellus_contig6987.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6987.2.1
Unique Nameprot_C-tenellus_contig6987.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length231
Homology
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: D7G3C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C5_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 3.370e-43
Identity = 77/159 (48.43%), Postives = 108/159 (67.92%), Query Frame = 0
Query:   72 GGLGNEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGPN 230
            GG G  V   +R LGT+ YLLP+LDGLD G+ +F   P L   ++ +L P +A+W+++PF+PLV+FI+L +  R+    R IRFN+QQAILVD+  V+  LL +   ++ P GE   TNF FYCL+ A+ YA  E   G++ NQIPLISA AE+Q+GP+
Sbjct:    8 GGKGESVR--NRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGPS 164          
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A6H5LCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCJ5_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 6.800e-41
Identity = 74/151 (49.01%), Postives = 105/151 (69.54%), Query Frame = 0
Query:   80 VGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGPN 230
            V +R LGT+ YLLP+LDGLD G+ +F   P L   ++ +L P +A+W+++PF+PLV+FI+L +  R+    R IRFN+QQAILVD+  V+  LL +   ++ P GE   TNF FYCL+ A+ YA  E   G++ NQIPLISA AE+Q+GP+
Sbjct:  155 VRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGPS 305          
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A835YUZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ7_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.230e-35
Identity = 66/177 (37.29%), Postives = 108/177 (61.02%), Query Frame = 0
Query:   53 CSSVLKRIKRSRGEALHMRGGLGNEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 229
            CS++ +R  + R   L M     +  P  +R+L   PY+LPVLDG+ +G+ ++   P + + +Y +L P +A+W  +PFL   VF+  T  AR   + RL+RF++QQAIL+D+ L++  LL+++   + P G   F    FY L++A+ Y+   N+ G+ PN+IP+IS  A+ QIGP
Sbjct:   48 CSTIGQRGSQRRTSGLCMASD--DSAPFEARLLACFPYILPVLDGVGSGRNVYAAVPAVGEAVYGVLGPALAIWNGVPFLGFGVFLAFTFAARNTELSRLVRFSLQQAILIDIALIVLGLLENVTKAVAPGGADVFATLQFYILISAVAYSLVSNLQGKEPNEIPIISEAAQRQIGP 222          
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S0PYH6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PYH6_9EUKA)

HSP 1 Score: 125 bits (313), Expect = 3.520e-32
Identity = 64/156 (41.03%), Postives = 99/156 (63.46%), Query Frame = 0
Query:   74 LGNEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 229
            L  EVP   R+ GTLPY+LPVLDG   G Y+++  PG  +    ++ P +AL++ +PF  +V+FI L++F R  G+ R++RFNIQQA+L+D+ L++  L   + S L    +   TNF FY  +  ++Y+   N  G +P+Q+P++S  A MQIGP
Sbjct:   37 LSEEVPAVDRVFGTLPYILPVLDGFGYGIYVYQNVPGAGEVA-GVIAPLVALFQSLPFAGIVLFIGLSLFTRNAGLSRMVRFNIQQALLLDIALIIPGLFSPVTSLLPLELQIIGTNFVFYVCVFTVIYSAWSNAQGELPDQVPVLSEAAMMQIGP 191          
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S0JI91_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JI91_9EUKA)

HSP 1 Score: 120 bits (301), Expect = 2.920e-30
Identity = 65/151 (43.05%), Postives = 92/151 (60.93%), Query Frame = 0
Query:   79 PVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 229
            P   R+ GTLPYLLP LDG   G Y+++  PG       +  P +AL++ +PF  LV+FI L+ F R  G+ RL+RFNIQQA+L+D+ L++  L   +   L    +   TN  FY  +  +LYAT  N  G++P+Q+PL+S  A MQIGP
Sbjct:   53 PAVDRLFGTLPYLLPSLDGFGYGAYIYQNVPGAAQAAGAVA-PFVALFQSLPFAGLVLFIGLSFFTRNAGLSRLVRFNIQQALLLDIALIIPGLFSPVTGLLPAELQIIGTNLVFYVCLFTVLYATWCNAQGKLPDQVPLLSEAALMQIGP 202          
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A1E7FL46_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FL46_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.900e-26
Identity = 62/156 (39.74%), Postives = 96/156 (61.54%), Query Frame = 0
Query:   68 LHMRGGLGNEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVA 223
            LHM     +E+    R+L  LPYL+P+LDG   GKYLF L P L      +L P  A++  IPF  L+ FI L++ +R P +PR +RFNIQQA+++D+ L+  SLL  L   +  +   S  NF +  ++ +++Y+   N++G+VP++IP+IS  A
Sbjct:   68 LHMSNN--SEIEGTDRVLSCLPYLIPLLDGDRYGKYLFYLVPALGMADSIVLGPFKAIYSVIPFAQLIAFIGLSVLSRNPDIPRPVRFNIQQALILDIALIFPSLLGQLPIPIPAIVANSGNNFVYLAIVGSVVYSVVSNVTGKVPDKIPVISEAA 221          
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S4ES88_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ES88_CHRCT)

HSP 1 Score: 109 bits (273), Expect = 6.570e-26
Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = 0
Query:   76 NEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 229
            +E P   R+L TLPY+LP +DG   G Y+++  P +   +     P +A +E IPF  LV FI +++F R P + R +RFNIQQA+L+D+ L++  L   L        +   TNF FY  +  + YA   N  G+ P+Q+PL+S  A MQIGP
Sbjct:   68 DEAPALERVLATLPYVLPAIDGFAYGLYVYQNVPPI-GAIAGAAFPFVASFESIPFGGLVFFIGMSLFTRNPNLSRFVRFNIQQALLLDIALIVPGLFGPLTKTFPVELQILGTNFIFYAWVLVVGYALFSNAQGKAPDQVPLLSDAASMQIGP 220          
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S3PUS0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUS0_9STRA)

HSP 1 Score: 109 bits (273), Expect = 7.400e-26
Identity = 60/157 (38.22%), Postives = 93/157 (59.24%), Query Frame = 0
Query:   76 NEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQ-PGVPRLIRFNIQQAILVDLGLVLFSLL-DSLLSFLVPMGEASF-TNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 229
            N++    RI   +PY+LP+LDG   GKY+++  P L       + P +++ E  PFL L++F + T+  R  PG+ R +RFN QQA+L+D+ L+L +L  + L    +P   A   + FT+Y LM+ ILY+   N+ G  P+Q+P +S  AEM  GP
Sbjct:   69 NDIDGPDRIKSCIPYVLPLLDGDSFGKYIYERVPPLNTIDELFIAPLVSILESYPFLSLILFFIFTLGTRNVPGMSRAVRFNAQQAVLIDVALILPTLFSEGLADVEIPRVYAEVGSTFTYYVLMSCILYSVVSNLKGEKPDQLPFVSPAAEMMTGP 225          
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S2AKC4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKC4_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.140e-25
Identity = 64/150 (42.67%), Postives = 90/150 (60.00%), Query Frame = 0
Query:   83 RILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSF---LVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 229
            R+   LPYLLP+LDGL  G  +F++ PG   T   +L P  A+   IPF  L+ F++L+  +R   + R +RF++QQAIL+D+ L+L SL+  L S    + P+      NF FY L+A I Y+   N+ G+VPN IP IS  AE  IGP
Sbjct:  198 RVFACLPYLLPMLDGLQYGNGVFQMVPGAGATASVILGPFAAIRNAIPFGGLIFFLILSSLSRNENLNRGVRFSMQQAILIDIALILPSLVGGLASIGGEISPVITTPAENFVFYFLIATISYSVGSNLLGKVPNGIPFISEAAERSIGP 347          
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S3WM08_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WM08_9SPIT)

HSP 1 Score: 108 bits (270), Expect = 2.150e-25
Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 0
Query:   74 LGNEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFAR-QPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASF-TNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 229
            L +E     R+  TLPY LP +DG   G Y+F   PG  +   T+L P +  +  +PF  ++ FI L++F R   G+ R +RFNIQQA+++D+ L++ SL  SL S  +P   A   +NF FY +   + YA   N+ G++P+Q+P+IS  A++QIGP
Sbjct:   72 LASEPTPAERVFATLPYFLPFIDGFQYGIYVFNNVPGGLEFAKTVL-PFVIAFNSLPFAGIITFIGLSVFTRPSSGLSRFVRFNIQQALVLDILLIVPSLFSSL-SGAIPSSVAIIGSNFVFYVMALVVSYALVSNVQGKLPDQVPVISEAADLQIGP 227          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C5_ECTSI3.370e-4348.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCJ5_9PHAE6.800e-4149.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YUZ7_9STRA4.230e-3537.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0PYH6_9EUKA3.520e-3241.03Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0JI91_9EUKA2.920e-3043.05Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A1E7FL46_9STRA1.900e-2639.74Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S4ES88_CHRCT6.570e-2639.61Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3PUS0_9STRA7.400e-2638.22Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2AKC4_9STRA2.140e-2542.67Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3WM08_9SPIT2.150e-2539.24Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005691Chloroplast protein import component Tic20PFAMPF16166TIC20coord: 83..222
e-value: 1.6E-11
score: 44.3
IPR005691Chloroplast protein import component Tic20PANTHERPTHR33510PROTEIN TIC 20-II, CHLOROPLASTICcoord: 67..227
NoneNo IPR availablePANTHERPTHR33510:SF5PROTEIN TIC 20-II, CHLOROPLASTICcoord: 67..227
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 141..160
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 206..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 161..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..117
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6987contigC-tenellus_contig6987:2726..4693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6987.2.1mRNA_C-tenellus_contig6987.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6987 2315..6967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6987.2.1 ID=prot_C-tenellus_contig6987.2.1|Name=mRNA_C-tenellus_contig6987.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=231bp
MMKLVSLTFLVVWGFICAERAWSFAIPASHQLLVGKGLGTVQSRVCPTRE
NGCSSVLKRIKRSRGEALHMRGGLGNEVPVGSRILGTLPYLLPVLDGLDN
GKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVP
RLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAI
LYATTENMSGRVPNQIPLISAVAEMQIGPN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005691Tic20