mRNA_C-tenellus_contig6987.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: D7G3C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C5_ECTSI) HSP 1 Score: 152 bits (383), Expect = 1.020e-38 Identity = 77/159 (48.43%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 625 GGLGNEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGPN 1101 GG G V +R LGT+ YLLP+LDGLD G+ +F P L ++ +L P +A+W+++PF+PLV+FI+L + R+ R IRFN+QQAILVD+ V+ LL + ++ P GE TNF FYCL+ A+ YA E G++ NQIPLISA AE+Q+GP+ Sbjct: 8 GGKGESVR--NRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGPS 164
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A6H5LCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCJ5_9PHAE) HSP 1 Score: 150 bits (379), Expect = 1.940e-36 Identity = 74/151 (49.01%), Postives = 105/151 (69.54%), Query Frame = 1 Query: 649 VGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGPN 1101 V +R LGT+ YLLP+LDGLD G+ +F P L ++ +L P +A+W+++PF+PLV+FI+L + R+ R IRFN+QQAILVD+ V+ LL + ++ P GE TNF FYCL+ A+ YA E G++ NQIPLISA AE+Q+GP+ Sbjct: 155 VRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGPS 305
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A835YUZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ7_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.190e-31 Identity = 66/177 (37.29%), Postives = 108/177 (61.02%), Query Frame = 1 Query: 568 CSSVLKRIKRSRGEALHMRGGLGNEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 1098 CS++ +R + R L M + P +R+L PY+LPVLDG+ +G+ ++ P + + +Y +L P +A+W +PFL VF+ T AR + RL+RF++QQAIL+D+ L++ LL+++ + P G F FY L++A+ Y+ N+ G+ PN+IP+IS A+ QIGP Sbjct: 48 CSTIGQRGSQRRTSGLCMASD--DSAPFEARLLACFPYILPVLDGVGSGRNVYAAVPAVGEAVYGVLGPALAIWNGVPFLGFGVFLAFTFAARNTELSRLVRFSLQQAILIDIALIVLGLLENVTKAVAPGGADVFATLQFYILISAVAYSLVSNLQGKEPNEIPIISEAAQRQIGP 222
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S0PYH6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PYH6_9EUKA) HSP 1 Score: 124 bits (312), Expect = 8.110e-29 Identity = 64/156 (41.03%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 631 LGNEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 1098 L EVP R+ GTLPY+LPVLDG G Y+++ PG + ++ P +AL++ +PF +V+FI L++F R G+ R++RFNIQQA+L+D+ L++ L + S L + TNF FY + ++Y+ N G +P+Q+P++S A MQIGP Sbjct: 37 LSEEVPAVDRVFGTLPYILPVLDGFGYGIYVYQNVPGAGEVA-GVIAPLVALFQSLPFAGIVLFIGLSLFTRNAGLSRMVRFNIQQALLLDIALIIPGLFSPVTSLLPLELQIIGTNFVFYVCVFTVIYSAWSNAQGELPDQVPVLSEAAMMQIGP 191
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S0JI91_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JI91_9EUKA) HSP 1 Score: 120 bits (300), Expect = 4.480e-27 Identity = 65/151 (43.05%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 646 PVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 1098 P R+ GTLPYLLP LDG G Y+++ PG + P +AL++ +PF LV+FI L+ F R G+ RL+RFNIQQA+L+D+ L++ L + L + TN FY + +LYAT N G++P+Q+PL+S A MQIGP Sbjct: 53 PAVDRLFGTLPYLLPSLDGFGYGAYIYQNVPGAAQAAGAVA-PFVALFQSLPFAGLVLFIGLSFFTRNAGLSRLVRFNIQQALLLDIALIIPGLFSPVTGLLPAELQIIGTNLVFYVCLFTVLYATWCNAQGKLPDQVPLLSEAALMQIGP 202
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A1E7FL46_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FL46_9STRA) HSP 1 Score: 111 bits (277), Expect = 9.750e-24 Identity = 62/156 (39.74%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 613 LHMRGGLGNEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVA 1080 LHM +E+ R+L LPYL+P+LDG GKYLF L P L +L P A++ IPF L+ FI L++ +R P +PR +RFNIQQA+++D+ L+ SLL L + + S NF + ++ +++Y+ N++G+VP++IP+IS A Sbjct: 68 LHMSNN--SEIEGTDRVLSCLPYLIPLLDGDRYGKYLFYLVPALGMADSIVLGPFKAIYSVIPFAQLIAFIGLSVLSRNPDIPRPVRFNIQQALILDIALIFPSLLGQLPIPIPAIVANSGNNFVYLAIVGSVVYSVVSNVTGKVPDKIPVISEAA 221
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S4ES88_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ES88_CHRCT) HSP 1 Score: 109 bits (272), Expect = 3.990e-23 Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = 1 Query: 637 NEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 1098 +E P R+L TLPY+LP +DG G Y+++ P + + P +A +E IPF LV FI +++F R P + R +RFNIQQA+L+D+ L++ L L + TNF FY + + YA N G+ P+Q+PL+S A MQIGP Sbjct: 68 DEAPALERVLATLPYVLPAIDGFAYGLYVYQNVPPI-GAIAGAAFPFVASFESIPFGGLVFFIGMSLFTRNPNLSRFVRFNIQQALLLDIALIVPGLFGPLTKTFPVELQILGTNFIFYAWVLVVGYALFSNAQGKAPDQVPLLSDAASMQIGP 220
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S3PUS0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUS0_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.520e-23 Identity = 60/157 (38.22%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 637 NEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQ-PGVPRLIRFNIQQAILVDLGLVLFSLL-DSLLSFLVPMGEASF-TNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 1098 N++ RI +PY+LP+LDG GKY+++ P L + P +++ E PFL L++F + T+ R PG+ R +RFN QQA+L+D+ L+L +L + L +P A + FT+Y LM+ ILY+ N+ G P+Q+P +S AEM GP Sbjct: 69 NDIDGPDRIKSCIPYVLPLLDGDSFGKYIYERVPPLNTIDELFIAPLVSILESYPFLSLILFFIFTLGTRNVPGMSRAVRFNAQQAVLIDVALILPTLFSEGLADVEIPRVYAEVGSTFTYYVLMSCILYSVVSNLKGEKPDQLPFVSPAAEMMTGP 225
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S3WM08_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WM08_9SPIT) HSP 1 Score: 108 bits (269), Expect = 1.190e-22 Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 1 Query: 631 LGNEVPVGSRILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFAR-QPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSFLVPMGEASF-TNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 1098 L +E R+ TLPY LP +DG G Y+F PG + T+L P + + +PF ++ FI L++F R G+ R +RFNIQQA+++D+ L++ SL SL S +P A +NF FY + + YA N+ G++P+Q+P+IS A++QIGP Sbjct: 72 LASEPTPAERVFATLPYFLPFIDGFQYGIYVFNNVPGGLEFAKTVL-PFVIAFNSLPFAGIITFIGLSVFTRPSSGLSRFVRFNIQQALVLDILLIVPSLFSSL-SGAIPSSVAIIGSNFVFYVMALVVSYALVSNVQGKLPDQVPVISEAADLQIGP 227
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Match: A0A7S2AKC4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKC4_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.820e-22 Identity = 64/150 (42.67%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 658 RILGTLPYLLPVLDGLDNGKYLFKLFPGLRDTMYTMLMPGIALWEHIPFLPLVVFILLTIFARQPGVPRLIRFNIQQAILVDLGLVLFSLLDSLLSF---LVPMGEASFTNFTFYCLMAAILYATTENMSGRVPNQIPLISAVAEMQIGP 1098 R+ LPYLLP+LDGL G +F++ PG T +L P A+ IPF L+ F++L+ +R + R +RF++QQAIL+D+ L+L SL+ L S + P+ NF FY L+A I Y+ N+ G+VPN IP IS AE IGP Sbjct: 198 RVFACLPYLLPMLDGLQYGNGVFQMVPGAGATASVILGPFAAIRNAIPFGGLIFFLILSSLSRNENLNRGVRFSMQQAILIDIALILPSLVGGLASIGGEISPVITTPAENFVFYFLIATISYSVGSNLLGKVPNGIPFISEAAERSIGP 347 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6987.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6987.2.1 >prot_C-tenellus_contig6987.2.1 ID=prot_C-tenellus_contig6987.2.1|Name=mRNA_C-tenellus_contig6987.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=231bp MMKLVSLTFLVVWGFICAERAWSFAIPASHQLLVGKGLGTVQSRVCPTREback to top mRNA from alignment at C-tenellus_contig6987:2315..6967+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6987.2.1 ID=mRNA_C-tenellus_contig6987.2.1|Name=mRNA_C-tenellus_contig6987.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4653bp|location=Sequence derived from alignment at C-tenellus_contig6987:2315..6967+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6987:2315..6967+ >mRNA_C-tenellus_contig6987.2.1 ID=mRNA_C-tenellus_contig6987.2.1|Name=mRNA_C-tenellus_contig6987.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=693bp|location=Sequence derived from alignment at C-tenellus_contig6987:2315..6967+ (Choristocarpus tenellus KU2346)back to top |