prot_C-tenellus_contig6711.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6711.1.2
Unique Nameprot_C-tenellus_contig6711.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length182
Homology
BLAST of mRNA_C-tenellus_contig6711.1.2 vs. uniprot
Match: A0A6H5JF13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF13_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.010e-11
Identity = 57/172 (33.14%), Postives = 79/172 (45.93%), Query Frame = 0
Query:   37 ATDYHCTTVGLTEGGQQVMLCLVVKVAY----------------RSAHAGVQTPEKVLRPSMLG------------FVL--VLDHRSGVIRVLSTQTCRSTGGKSCAALCIPLAQYLKRSGGVVVSTCVPKSGPRVPQPMLTKPGRQLSNAAVLRGKSEMAILNPVYPVAIV 178
            ATDYHC T GL +GG+ V+L LVVKV Y                R    G +T       +  G            F++  +LD       V    + RS G + CA++C  +A+ L+             + P +    + +PGR+LSN AV +G+S  AI NPVYPVAIV
Sbjct:  580 ATDYHCVTAGLRDGGRGVLLSLVVKVMYTGPRRKRKRGGGRGDGREERGGAKTXXXXXTGTRNGSGGDAGAAVEGPFLVSYILDLDLESGEVAVLGSGRSEGRRRCASMCEKMARCLRYHD----------AAPVIDDFHVDRPGRRLSNTAVFQGRSVGAITNPVYPVAIV 741          
BLAST of mRNA_C-tenellus_contig6711.1.2 vs. uniprot
Match: D8LIF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF3_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 7.220e-6
Identity = 47/150 (31.33%), Postives = 64/150 (42.67%), Query Frame = 0
Query:   29 SRRSSAAIATDYHCTTVGLTEGGQQVMLCLVVKVAYRSAHAGVQTPEKVLRPSMLGFVLVLDHRSGVIRVLSTQTCRSTGGKSCAALCIPLAQYLKRSGGVVVSTCVPKSGPRVPQPMLTKPGRQLSNAAVLRGKSEMAILNPVYPVAIV 178
            S R+ +  ATDYHC T GL +GG+ V+L LVVKV Y  +                         +      +T T   +GG + AA+           G  ++S  +                 +LSN AV +G+S  AI NPVYPVAIV
Sbjct:  521 SARAPSVHATDYHCVTAGLRDGGRGVLLSLVVKVMYTGSRRXXXXXXXXXXXXXXXX-----XXAKTXXXXATGTRNGSGGDASAAV----------EGPFLLSYILDLD-------------LELSNTAVFQGRSVGAITNPVYPVAIV 642          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6711.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JF13_9PHAE2.010e-1133.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIF3_ECTSI7.220e-631.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6711contigC-tenellus_contig6711:1727..3696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6711.1.2mRNA_C-tenellus_contig6711.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig6711 1679..4425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6711.1.2 ID=prot_C-tenellus_contig6711.1.2|Name=mRNA_C-tenellus_contig6711.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=182bp
MSTSDLTSAVDCGSTSSPPFASVSTGCGSRRSSAAIATDYHCTTVGLTEG
GQQVMLCLVVKVAYRSAHAGVQTPEKVLRPSMLGFVLVLDHRSGVIRVLS
TQTCRSTGGKSCAALCIPLAQYLKRSGGVVVSTCVPKSGPRVPQPMLTKP
GRQLSNAAVLRGKSEMAILNPVYPVAIVKGA*
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