prot_C-tenellus_contig6709.6.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6709.6.1
Unique Nameprot_C-tenellus_contig6709.6.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length120
Homology
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Match: A0A6H5L3Q3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q3_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 4.360e-50
Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = 0
Query:    2 RVQDGNGFRATVRYFGPVCTAKDPVSPWIGVEFDDPTRGKHDGAVTKSDGTVHRYFSCTAGGSGSFLKADKLNAGCTMVDALLQQYVAMDAPLVAPENVMPDAYAATAKGHKKVR 116
            RV DGNGFR TVRY GPVCTAKDP +PWIGVEFDDP RGKHDGAV K DG+  RYF+C  GGSGSFLK  K + G +M +AL QQYV M+APL+APEN++PDAYA+T+KG KKV+
Sbjct:   18 RVVDGNGFRGTVRYVGPVCTAKDPTTPWIGVEFDDPARGKHDGAVEKPDGSSVRYFTCVNGGSGSFLKPSKFSTGISMAEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKVQ 132          
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Match: D7G0Z3_ECTSI (Putative: beta-tubulin folding cofactor E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z3_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 5.690e-49
Identity = 81/113 (71.68%), Postives = 94/113 (83.19%), Query Frame = 0
Query:    2 RVQDGNGFRATVRYFGPVCTAKDPVSPWIGVEFDDPTRGKHDGAVTKSDGTVHRYFSCTAGGSGSFLKADKLNAGCTMVDALLQQYVAMDAPLVAPENVMPDAYAATAKGHKK 114
            RV DGNGFRATVRY GPVCTAK+P +PWIGVEFDDP RGKHDGAV K DG+  RYF+C  GGSGSFLK  K + G +M +AL QQYV M+APL+APEN++PDAYA+T+KG KK
Sbjct:   18 RVVDGNGFRATVRYVGPVCTAKEPTTPWIGVEFDDPARGKHDGAVEKPDGSSLRYFTCVNGGSGSFLKPGKFSTGISMAEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKK 130          
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Match: A0A835YMA8_9STRA (Putative beta-tubulin folding cofactor E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA8_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.780e-39
Identity = 72/115 (62.61%), Postives = 84/115 (73.04%), Query Frame = 0
Query:    2 RVQDGNGFRATVRYFGPVCTAKDPVSPWIGVEFDDPTRGKHDGAVTKSDGTVHRYFSCTAGGSGSFLKADKLNAGCTMVDALLQQYVAMDAPLVAPENVMPDAYAATAKG-HKKV 115
            RVQD  GFRATVRY GPVCT+KD  + WIGVEFDD  RGKHDGAV    G + RY SCT GGSGSFLK  K++AG  + DAL   YVA+DAPLVAP+N +   YA T +G HK++
Sbjct:   14 RVQDEKGFRATVRYIGPVCTSKDKDATWIGVEFDDAARGKHDGAVESEQGELVRYLSCTDGGSGSFLKPHKIDAGAALADALAAHYVAVDAPLVAPDNKLVGQYAQTVRGRHKQI 128          
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Match: A0A7S1XKZ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKZ2_9STRA)

HSP 1 Score: 129 bits (323), Expect = 8.420e-34
Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 0
Query:    2 RVQDGNGFRATVRYFGPVCTAKDPVSPWIGVEFDDPTRGKHDGAVTKSDGTVHRYFSCTAGGSGSFLKADKLNAGCTMVDALLQQYVAMDAPLVAPENVMPDAYAATAK 110
            RVQD +G+R TVRY+GPV T+K+  + W+GVE+DD TRGKHDG+VT  DG V RYF+   G   SFLK  K++AG + ++AL ++YV MDAPL+AP NV    YA T K
Sbjct:   37 RVQDADGYRGTVRYYGPVATSKNANANWVGVEWDDATRGKHDGSVTTKDGEVVRYFTVPEGKKASFLKPGKVDAGASFMEALGERYVGMDAPLLAPNNVFEGMYANTNK 145          
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Match: A0A4D9DAF6_9STRA (CAP-Gly domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAF6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.820e-30
Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = 0
Query:    2 RVQDGNGFRATVRYFGPVCTAKDPVSPWIGVEFDDPTRGKHDGAVTKSDGTVHRYFSCTAGGS--GSFLKADKLNAGCTMVDALLQQYVAMDAPLVAPENVMPDAYAATAKGHKK 114
            RV D  G R TVRY GPV +AKDP + W+GVE+DDP RGKHDG+V  + G +HR+FSC   G    SFLK +KL+ G +++  L ++YVA DAPL AP  V  +AYA T++G +K
Sbjct:   15 RVADEEGNRGTVRYLGPVASAKDPGAAWVGVEWDDPGRGKHDGSVLTAAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHKRYVAPDAPLEAPNQVFENAYANTSRGGQK 129          
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Match: A0A482RY02_9ARCH (CAP-Gly domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY02_9ARCH)

HSP 1 Score: 112 bits (279), Expect = 2.710e-29
Identity = 50/114 (43.86%), Postives = 83/114 (72.81%), Query Frame = 0
Query:    2 RVQDGNGFRATVRYFGPVCTAKDPVSPWIGVEFDDPTRGKHDGAVTKSDGTVHRYFSCTAGGSGSFLKADKLNAGCTMVDALLQQYVAMDAPLVAPEN-VMPDAYAATAKGHKK 114
            RV D +G++ATVRYFGPV  A++    W+GVE+D+P+RGKHDG+     G +HRYF C A  +GSF++  K+++G ++  AL ++YV++++  +A E  ++PD++ +T+KG+ K
Sbjct:   11 RVHDADGYKATVRYFGPVMAAQNKEEVWLGVEWDNPSRGKHDGSCVDEHGIIHRYFRC-ASTAGSFIRPSKVSSGISLERALHERYVSLESEEIAQEGGMLPDSFVSTSKGNMK 123          
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Match: A0A7S3HIA2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIA2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.340e-26
Identity = 55/114 (48.25%), Postives = 76/114 (66.67%), Query Frame = 0
Query:    2 RVQDGNGFRATVRYFGPVCTAKDPVSPWIGVEFDDPTRGKHDGAVTKSDGTVHRYFSCTAGGSGSFLKADKLNAGCTMVDALLQQYVAMDAPLVAP-ENVMPDAYAATAKGHKK 114
            RV D  G++ATVRY GPV  AK+    W GVE+D+PTRGKHDG+   S G +HRYF C  G SGSF+K  K+  G T + AL  +YV +DAP +A  +  +P+ + +T +G++K
Sbjct:   18 RVVDSEGYKATVRYIGPVVGAKNQEEIWFGVEWDNPTRGKHDGSSVDSSGKLHRYFECVHG-SGSFIKPTKVAYGRTFLAALNDRYVNLDAPTIAEADGTVPNVFVSTLRGNQK 130          
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Match: A0A7S3ZSI4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSI4_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.950e-25
Identity = 55/100 (55.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:    2 RVQDGNGFRATVRYFGPVCTA-KDPVSPWIGVEFDDPTRGKHDGAVTKSDGTVHRYFSCTAGGSGSFLKADKLNAGCTMVDALLQQYVAMDAPLVAPENV 100
            R++D N FR T+RY GPV T+ KDP + W GVE+DD TRGKHDGAV K    + RYF+C AG +GSF+K  K++ G ++V+AL Q+YV +DAP+ AP  V
Sbjct:   19 RIRDDNDFRGTIRYVGPVATSTKDPNATWYGVEWDDATRGKHDGAVEKDSQEI-RYFTCPAG-AGSFVKPKKVDRGSSLVEALRQKYVGLDAPVEAPLGV 116          
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Match: A0A7S1FN11_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FN11_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 6.210e-18
Identity = 51/130 (39.23%), Postives = 72/130 (55.38%), Query Frame = 0
Query:    2 RVQDGNGFRATVRYFGPVCTAKDPVSPWIGVEFDDPTRGKHDGAVT-KSDGTVHRYFSC---------TAG-------GSGSFLKADKLNAGCTMVDALLQQYVAMDAPLVAPENVMPDAYAATAKGHKK 114
            RV+D +GF  T  Y GPV +AK+    ++GV +DDPTRGKHDG+V  +    + R+FS          +AG         GSF++  KL  G ++   L  +YV +DAPL+   NV+P   A TA+G  K
Sbjct:   41 RVRDADGFLGTALYLGPVASAKNAEEVYVGVAWDDPTRGKHDGSVICRRTNRLIRHFSLADRAKHLSSSAGDPRPASVSGGSFVRPAKLRGGVSLTSVLSDRYVPLDAPLLTRNNVLPGRVAMTARGVPK 170          
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Match: A0A1E7FAE4_9STRA (L domain-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAE4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.150e-17
Identity = 47/115 (40.87%), Postives = 75/115 (65.22%), Query Frame = 0
Query:    2 RVQDGNGFRATVRYFGPVCTAKDPVSPWIGVEFDDPTRGKHDGAVT-KSDGTVHRYFSCTAGGSGSFLKADKLNAGCTMVDALLQ-QYVAMDAPLVAPENVMPDAYAATAKGHKK 114
            R++D +GF  TV Y G V ++K+P   + G+ +DD +RGKHDG+V  +    + R+F+C     GSFL+  KL+ G T+   LL+ +YV M+AP++AP N++P + A T+ G +K
Sbjct:   25 RIRDTDGFVGTVVYTGSVASSKNPTEVYAGIVWDDHSRGKHDGSVICRKTNQIVRHFACGPT-QGSFLRLRKLDLGVTLTTTLLRDKYVKMNAPIIAPNNLLPHS-AKTSSGREK 137          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6709.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3Q3_9PHAE4.360e-5071.30CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0Z3_ECTSI5.690e-4971.68Putative: beta-tubulin folding cofactor E n=1 Tax=... [more]
A0A835YMA8_9STRA2.780e-3962.61Putative beta-tubulin folding cofactor E n=1 Tax=T... [more]
A0A7S1XKZ2_9STRA8.420e-3455.96Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A4D9DAF6_9STRA2.820e-3053.04CAP-Gly domain-containing protein n=2 Tax=Monodops... [more]
A0A482RY02_9ARCH2.710e-2943.86CAP-Gly domain-containing protein n=1 Tax=archaeon... [more]
A0A7S3HIA2_9STRA2.340e-2648.25Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3ZSI4_9STRA1.950e-2555.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1FN11_9STRA6.210e-1839.23Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A1E7FAE4_9STRA1.150e-1740.87L domain-like protein n=1 Tax=Fragilariopsis cylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000938CAP Gly-rich domainSMARTSM01052CAP_GLY_2coord: 1..74
e-value: 4.9E-12
score: 56.0
IPR000938CAP Gly-rich domainPFAMPF01302CAP_GLYcoord: 2..73
e-value: 9.2E-15
score: 54.3
IPR000938CAP Gly-rich domainPROSITEPS50245CAP_GLY_2coord: 29..69
score: 8.873
IPR036859CAP Gly-rich domain superfamilyGENE3D2.30.30.190coord: 1..79
e-value: 4.2E-15
score: 57.0
IPR036859CAP Gly-rich domain superfamilySUPERFAMILY74924Cap-Gly domaincoord: 2..87
NoneNo IPR availablePANTHERPTHR15140TUBULIN-SPECIFIC CHAPERONE Ecoord: 2..99
NoneNo IPR availablePANTHERPTHR15140:SF6TUBULIN-SPECIFIC CHAPERONE Ecoord: 2..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6709contigC-tenellus_contig6709:5348..6992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6709.6.1mRNA_C-tenellus_contig6709.6.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6709 5342..6992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6709.6.1 ID=prot_C-tenellus_contig6709.6.1|Name=mRNA_C-tenellus_contig6709.6.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=120bp
MRVQDGNGFRATVRYFGPVCTAKDPVSPWIGVEFDDPTRGKHDGAVTKSD
GTVHRYFSCTAGGSGSFLKADKLNAGCTMVDALLQQYVAMDAPLVAPENV
MPDAYAATAKGHKKVRVKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000938CAP-Gly_domain
IPR036859CAP-Gly_dom_sf