mRNA_C-tenellus_contig658.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE) HSP 1 Score: 157 bits (398), Expect = 4.920e-37 Identity = 118/309 (38.19%), Postives = 162/309 (52.43%), Query Frame = 2 Query: 179 VEVGTKGQVGSSATAFDPRLQDNSGCNPSGCTPALSRDGSLTPT-SRWSCSTTLGV--NECSITYSFGTPQPFRRIDVAFYLGDERTRQFEVDSDSTRMIDDESSGNTLDLEQFGPTTEVFLTDEVTIVSTPVDDGEWFSLTEVDIWVIRG----EEVADSGRS-------VTVSATGFDDRT--DSGCN-GQCLASNSRDGNYESDASRWSCINSDATGGLCSITYDFSSGARLDSILVSLYLGDERTRSLSVYLNGNTSPETTWTSSGNTDGFEEIEIDRQGITSVKLEALNLGTEWLSIKETMFYV 1054 VE T V + A +DPRL ++GC+PSGC L+RDG T SRWSC LG + C ITY G +++A + GDERTR E++ D+ SSG T E T EV T + ++D EW S+ EV+I V G ++V D+ VT ++ FD R +GC+ C A +RDG+ SD SRWSC S GG CSI+YD + L + ++LY G R R++ V ++G+ + TTWTSSG TDGFE I++ + + + EWLSIKET V Sbjct: 25 VEASTLATVTAVADLYDPRLSADNGCDPSGCVAELTRDGDATSLESRWSCQPALGDAGSVCRITYGLGIQYQLTGLNIAMFKGDERTRTLEINIDNLPYTVWTSSGTTAGFE----TIEVDTTGRWIEIVGVLEDSEWLSIMEVEILVDDGVTDTDDVVDTTEVEAGSLGIVTATSALFDPRLGDSNGCDPAGCTAELTRDGDV-SDESRWSCAPS--LGGTCSISYDLGAVYDLSKLRLALYNGATRVRTVDVSVDGSLA--TTWTSSGTTDGFENIDLSGYSGQDITVTGVLDNLEWLSIKETEIMV 324
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 142 bits (357), Expect = 8.090e-32 Identity = 111/306 (36.27%), Postives = 156/306 (50.98%), Query Frame = 2 Query: 179 VEVGTKGQVGSSATAFDPRLQ-DNSGCNPSGCTPALSRDGSLTPT-SRWSCSTTLGV--NECSITYSFGTPQPFRRIDVAFYLGDERTRQFEVDSDSTRMIDDESSGNTLDLEQFGPTTEVFLTDEVTIVSTPVDDGEWFSLTEVDIWV---------IRGEEVADSGRSVTVSATG--FDDRT--DSGCN-GQCLASNSRDGNYESDASRWSCINSDATGGLCSITYDFSSGARLDSILVSLYLGDERTRSLSVYLNGNTSPETTWTSSGNTDGFEEIEIDRQGITSVKLEALNLGTEWLSIKET 1042 VE T V +A +D + + GC+P+GC +RDG T SRWSC LG + C ITY G +++A Y GDERTR E++ D+ SSG T D E T EV + ++D EW S+ EV+I V + G ++G V+AT FD R +GC+ C A +RDG+ SD SRWSC S GG CSI+YD + L + ++LY G R R++ V ++G+ + TTWTSSG TDGFE +++ V + + +EW+SI ET Sbjct: 26 VEASTLATVTVAAPLYDTTVTASDGGCSPTGCIGDNTRDGDATSVESRWSCKPALGDAGSVCRITYGLGIQYQLTGLNIAMYKGDERTRTLEINIDNLPYTVWTSSGTTTDFE----TIEVDTMGRWIDIVGVLEDSEWLSIMEVEILVDDGVTDTDDVAGTTEVEAGSLGIVTATSALFDPRLGDSNGCDPAGCTAELTRDGDV-SDGSRWSCAPS--LGGTCSISYDLGAVYDLSELRLALYKGTTRVRTVDVTVDGSLA--TTWTSSGTTDGFENVDLSGYSGQDVTVTGVLDDSEWVSITET 322
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 4.820e-18 Identity = 105/351 (29.91%), Postives = 152/351 (43.30%), Query Frame = 2 Query: 122 PVFLGLLTALYTHCTTG-VWV--EVGTKGQ-VGSSATAFDPRLQDNSGCNPSGCTPALSRDGSLTPTSRWSCSTTLGVNE--CSITYSFGTPQPFRRIDVAFYLGDERTRQFEVDSDSTRMIDDESSGNTLDLEQFGPTTEVFLTDEVTIVSTPVDDGEWFSLTEVDIWVIRGEEVADSGRSVTVS----------------------------ATGFDDRTDSGCNGQCLASNSRDGNYESDASRWSCINSD---ATGGL----CSITYDFSSGARLDSILVSLYLGDERTRSLSVYLNGNTSPETTWTSSGNTDGFEEIEIDRQGITSVKLEA-LNLGTEWLSIKETMF 1048 PVF + TA T T +W E+GT+ V ++A FDP L ++GC+P+GCT AL+RDG SRWSC+T LG CSI+Y G + VA Y GD R R +V D + SSG T E V T V + +DD EW S+ E +I V V T + ATG D +C A +DG+ ++ W+C + G+ CS+ +D + + ++L G ER +S+ T+PE TSSG TDG E ++D + +SV++ + + +SI E F Sbjct: 220 PVFAPVATATPTVATPEQLWSAKEIGTQDTTVTTTADLFDPALAIDNGCDPAGCTAALTRDGDTGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGT--VINLQGVLDDSEWLSIIETEIMVWPQNVVTPPPTPATTAXXXXXQPATTSPIPTPVGDLQPVGLIPLATGDGSLLD-----RCAA---KDGDL---STSWTCTGDPREVSPQGILYYECSLLFDLVYTRHIKQVKIALADGAERAVDMSISRGYGTTPEELVTSSGTTDGLETYDVDYR-TSSVRISGDFSSPGQSISISEVEF 556
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 6.120e-17 Identity = 60/151 (39.74%), Postives = 76/151 (50.33%), Query Frame = 2 Query: 179 VEVGTKGQVGSSATAFDPRLQDNSGCNPSGCTPALSRDGSLTPTSRWSCSTTLGVNECSITYSFGTPQPFRRIDVAFYLGDERTRQFEVDSDSTRMIDDESSGNTLDLEQF---GPTTEVFLTDEVTIVSTPVDDGEWFSLTEVDIWVIRG 622 VE G G V ++A +D RL D GC+P GCT AL+RDG ++ SRWSC+ LG CSI+Y G + +A Y GD R R V D + SSG T E G T +V VTI + D EW S+ E +I V G Sbjct: 180 VEAGELGTVTATADLYDDRLGDTVGCDPEGCTAALTRDGDMSEDSRWSCAPELG-GLCSISYDLGAEYSIDELQLAMYQGDTRVRTVGVAVDGDLVTTWTSSGTTSGFESVDMSGATGQV-----VTITGAELSDSEWLSIVETEIMVYNG 324
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 3.440e-16 Identity = 59/157 (37.58%), Postives = 80/157 (50.96%), Query Frame = 2 Query: 179 VEVGTKGQVGSSATAFDPRLQDNSGCNPSGCTPALSRDGSLTPTSRWSCSTTLGVNECSITYSFGTPQPFRRIDVAFYLGDERTRQFEVDSDSTRMIDDESSGNTLDLEQF---GPTTEVFLTDEVTIVSTPVDDGEWFSLTEVDIWVIRGEEVADS 640 VE G V ++A +D RL D GC+P GCT AL+RDG ++ SRWSC+ LG CSI+Y G ++ + Y GD RTR +V D + SSG T + E G +V VTI + D +W S+ E +I V G+ A S Sbjct: 183 VEAAEMGTVTATADLYDTRLGDTVGCDPEGCTAALTRDGDMSEGSRWSCAPKLG-GPCSISYDLGAEYNVEQLRLRMYRGDSRTRTVDVSVDGALVTTWTSSGTTTEFESVDLSGAYGQV-----VTISGSNQADSQWLSIIETEIMVYEGDAPAPS 333
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI) HSP 1 Score: 68.9 bits (167), Expect = 5.590e-10 Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 179 VEVGTKGQVGSSATAFDPRLQDNSG---CNPSG---CTPALSRDGSLTPT-SRWSCSTTLGVNE--CSITYSFGTPQPFRRIDVAFYLGDERTRQF--EVDSDSTRMIDD--ESSGNTLDLEQFGPTTEVFLTDEVTIVSTPVDDGEWFSLTEVDIWV 613 VEVGTK +VG SATA D R ++SG C G CT +RDG + SRWSC+T L +E C I ++F PQ I VAF+ G++RTR V+ + T + +S+ NTL + +T V + ST + EW SL EV I+V Sbjct: 21 VEVGTKIEVGVSATAHDTRPGNSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESYTDSTFNTLGVTANEAST-------VMLESTALLSDEWISLIEVLIFV 171
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 3.430e-9 Identity = 63/158 (39.87%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 179 VEVGTKGQVGSSATAFDPRLQDNS---GCNPSG---CTPALSRDGSLTPT-SRWSCSTTLGVNE--CSITYSFGTPQPFRRIDVAFYLGDERTRQF--EVDSDSTRMIDD--ESSGNTLDLEQFGPTTEVFLTDEVTIVSTPVDDGEWFSLTEVDIWV 613 VEVGTK +VG SATA D R + +S GC G CT +RDG ++ SRWSC+T L +E C I +SF PQ I VAF+ G+ERTR V+ + T + +S+ NTL + +T V + S + EW SL EV I+V Sbjct: 459 VEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEAST-------VMLESVALLSDEWISLLEVLIFV 609
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Match: D7FI90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI90_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 4.690e-9 Identity = 59/156 (37.82%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 179 VEVGTKGQVGSSATAFDPRLQDNS---GCNPSG---CTPALSRDGSLTPT-SRWSCSTTLGVNE--CSITYSFGTPQPFRRIDVAFYLGDERTRQFEVDSDSTRMIDDESSGNTLDLEQFGPTTEVFLTDEVTIV--STPVDDGEWFSLTEVDIWV 613 VEVGTK +VG SATA D R + GC G CT +RDG ++ SRWSC+T+L +E C I ++F PQ I VAF+ +ER EV + ES +T + T V T+ T++ S + EW SL EV I+V Sbjct: 21 VEVGTKTEVGVSATAHDVRPGSSGNDVGCGEVGSLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYDDTFN------TLGVTATEASTVMLESVALLSDEWISLLEVQIFV 170
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Match: D7FI88_ECTSI (Similar to Pappalysin-2 (Pregnancy-associated plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI88_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 5.510e-9 Identity = 60/156 (38.46%), Postives = 80/156 (51.28%), Query Frame = 2 Query: 179 VEVGTKGQVGSSATAFDPR---LQDNSGCNPSG---CTPALSRDGSLTPT-SRWSCSTTLGVNE--CSITYSFGTPQPFRRIDVAFYLGDERTRQFEVDSDSTRMIDDESSGNTLDLEQFGPTTEVFLTDEVTIV--STPVDDGEWFSLTEVDIWV 613 VEVGTK +VG SATA D R D+ GC G CT +RDG ++ SRWSC+T+L +E C I ++F PQ I VAF+ +ER EV + ES +T + T V T+ T++ S + EW SL EV I+V Sbjct: 124 VEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYDDTFN------TLGVTATEASTVMLESVALLSDEWISLLEVQIFV 273
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 1.290e-8 Identity = 48/105 (45.71%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 179 VEVGTKGQVGSSATAFDPRLQDNSG---CNPSG---CTPALSRDGSLTPT-SRWSCSTTLGVNE--CSITYSFGTPQPFRRIDVAFYLGDERTRQFEVDSDSTRM 466 VEVGTK +VG SATA D R +SG C G CT +RDG + SRWSC+T L +E C I ++F PQ I VAF+ G+ERTR EV + +R+ Sbjct: 263 VEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRL 367 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig658.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig658.1.1 >prot_C-tenellus_contig658.1.1 ID=prot_C-tenellus_contig658.1.1|Name=mRNA_C-tenellus_contig658.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=321bp MALLPSRPVFLGLLTALYTHCTTGVWVEVGTKGQVGSSATAFDPRLQDNSback to top mRNA from alignment at C-tenellus_contig658:12694..16711+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig658.1.1 ID=mRNA_C-tenellus_contig658.1.1|Name=mRNA_C-tenellus_contig658.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4018bp|location=Sequence derived from alignment at C-tenellus_contig658:12694..16711+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig658:12694..16711+ >mRNA_C-tenellus_contig658.1.1 ID=mRNA_C-tenellus_contig658.1.1|Name=mRNA_C-tenellus_contig658.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=963bp|location=Sequence derived from alignment at C-tenellus_contig658:12694..16711+ (Choristocarpus tenellus KU2346)back to top |