prot_C-tenellus_contig6491.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6491.2.1
Unique Nameprot_C-tenellus_contig6491.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length69
Homology
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BLAST of mRNA_C-tenellus_contig6491.2.1 vs. uniprot
Match: A0A6H5KPD3_9PHAE (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPD3_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 9.090e-17
Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 0 
Query:    1 MCGNNTGSSANYIIPAILNLKLLRREGAKHGVFSEMSLNKVIIVFGAIFMALGTTVTLNEAGSH 64
            + G   GS ANYIIPA+LN+ LL+R GA  G+ SE++LNK II+FGA+FM +GT VTL EAG+H
Sbjct:  500 LIGAILGSGANYIIPAVLNISLLQRLGANGGLVSEITLNKAIILFGAVFMVMGTMVTLKEAGAH 563
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6491.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KPD3_9PHAE9.090e-1760.94Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6491contigC-tenellus_contig6491:6939..7145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6491.2.1mRNA_C-tenellus_contig6491.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6491 6939..7157 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6491.2.1 ID=prot_C-tenellus_contig6491.2.1|Name=mRNA_C-tenellus_contig6491.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=69bp
MCGNNTGSSANYIIPAILNLKLLRREGAKHGVFSEMSLNKVIIVFGAIFM
ALGTTVTLNEAGSHGEDS*
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