prot_C-tenellus_contig11570.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11570.2.1
Unique Nameprot_C-tenellus_contig11570.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length195
Homology
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BLAST of mRNA_C-tenellus_contig11570.2.1 vs. uniprot
Match: A0A6H5L145_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L145_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 8.590e-43
Identity = 80/137 (58.39%), Postives = 106/137 (77.37%), Query Frame = 0 
Query:   54 LSLQSLSLALCSATNMFGTPSGMSYMSEASVMPGWMDAALQGLQHKRGEVRQMSSALLNNYSLVIANALPS--IAEGKDSDLPDEAAQILFGALDGLEEEKSETVALRRLLAVGRLLRKLGTPGVSLVNEVGFKEQV 188
            LS Q+LS+A+CSA N F T  G  YM+ A VMPGW+D++L GLQH+RGEVRQM SALLNN+SLV+++A+ S   A G   ++ DE  QILFGALDGL++E S+ VALRR+L+VGRL+R  G+   SL+N+VG ++QV
Sbjct:  342 LSAQALSMAMCSAANCFATAGGSEYMARADVMPGWLDSSLAGLQHERGEVRQMCSALLNNFSLVLSDAIASKTAAGGPAVEMSDETTQILFGALDGLQDETSQLVALRRVLSVGRLVRASGSEAASLINDVGLRDQV 478
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11570.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L145_9PHAE8.590e-4358.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 26..193
e-value: 2.7E-10
score: 41.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11570contigC-tenellus_contig11570:3480..4978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11570.2.1mRNA_C-tenellus_contig11570.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11570 1469..5201 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11570.2.1 ID=prot_C-tenellus_contig11570.2.1|Name=mRNA_C-tenellus_contig11570.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=195bp
MWLCSRCFLSLDCCSVRKYPAPDMCAVNGLVLCNTGNSCIVVIVFILMPC
THCLSLQSLSLALCSATNMFGTPSGMSYMSEASVMPGWMDAALQGLQHKR
GEVRQMSSALLNNYSLVIANALPSIAEGKDSDLPDEAAQILFGALDGLEE
EKSETVALRRLLAVGRLLRKLGTPGVSLVNEVGFKEQVRRLGKW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like