mRNA_C-tenellus_contig11029.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11029.1.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.170e-62 Identity = 119/233 (51.07%), Postives = 149/233 (63.95%), Query Frame = 1 Query: 7 TVEILVNDTTNIQTFCGHGKS-CLADGALTVRLNGIE-VTAPAHYFVGNGMEVSTANLPGECRPFGFEKYWQRKVHEAELATQSEQSSRALRDVKDMDEWILSDLAKTNPDECESNV-RNVAEEGNLFNLQSEHISFQIVTPTMTLRLNHGKLHQLAMPDPSGLFDLPDHLTYQINVGFVEVGLGSMPQGILGETAVPNTDKDGSPIREEMGSIRGGEEDYRVNDILGTDFKQ 696 ++ I V D N+ + C G S CL DGAL V L+G+E + AP +G +EVS ANLPG CR FGFEKYW+RK E + ++ R LR M EWIL D TN +EC V R AEEG +F QSEH+SFQIVTP T+RL+HG+LHQ+AM DP+ FDLPDHLT+Q+N+ + +GILG+T VP D DG PI + +IRG EEDYRV+ LG DF Q Sbjct: 383 SIVIEVIDPHNLDSSCPAGVSPCLGDGALVVLLDGVESLFAPGTVALGADVEVSAANLPGACRSFGFEKYWERKKLE------NARAGRLLRTTPSMGEWILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGILGQTFVPTRDADGKPIMTGLEAIRGSEEDYRVDGALGVDFVQ 609
BLAST of mRNA_C-tenellus_contig11029.1.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE) HSP 1 Score: 192 bits (489), Expect = 1.170e-55 Identity = 107/229 (46.72%), Postives = 141/229 (61.57%), Query Frame = 1 Query: 16 ILVNDTTNIQTFCG-HGKSCLADGALTVRLNG-IEVTAPAHYFVGNGMEVSTANLPGECRPFGFEKYWQRKVHEAELATQSEQSSRALRDVKDMDEWILSDLAKTNPDECESNVRNVAEEGN--LFNLQSEHISFQIVTPTMTLRLNHGKLHQLAMPDPSGLFDLPDHLTYQINVGFVEVGLGSMPQGILGETAVPNTDKDGSPIREEMGSIRGGEEDYRVNDILGTDF 690 I V D ++ + C G +CLADGALTV L+G + + +P +G G+ +S NLPG CR FGFEKYW+RK +AE + + L+ +++M +WIL D TN EC V +G LF SEH SFQIVTP T+RL+HG+LHQLAM DP+ FD+PDHLT+Q+N+ F V L GILGET D +G+PI E M +IRG +EDY V+ L F Sbjct: 208 ITVTDPHSLDSACPVQGSTCLADGALTVELDGDVALLSPGEAELGPGVAISAVNLPGACRSFGFEKYWERK--KAEYVASGRRLNNDLQ-MQEMSDWILGDPTATNMAECTEYVLGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRFDIPDHLTWQMNLAFDNVDLAVDATGILGETQQHTLDANGNPIMEGMAAIRGSQEDYLVDGPLDNVF 433
BLAST of mRNA_C-tenellus_contig11029.1.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE) HSP 1 Score: 187 bits (474), Expect = 1.450e-54 Identity = 110/222 (49.55%), Postives = 136/222 (61.26%), Query Frame = 1 Query: 7 TVEILVNDTTNIQTFCGHGKS-CLADGALTVRLNGIEVT-APAHYFVGNGMEVSTANLPGECRPFGFEKYWQRKVHEAELATQSEQSSRALRDVKDMDEWILSDLAKTNPDECESNV-RNVAEEGNLFNLQSEHISFQIVTPTMTLRLNHGKLHQLAMPDPSGLFDLPDHLTYQINVGFVEVGLGSMPQGILGETAVPNTDKDGSPIREEMGSIRGGEEDYR 663 ++ I V + ++ + C G S CLADGAL V L+G E A +G G+E+S NLPG CR FGFEKYW+ K + E AT R LR M EWIL D TN DEC V R AEEG +F QSEH SFQIVTP T+RL+HG+LHQ+AM DP+ +DLPDHLT+Q+N+ + +GILGET VP D G PI M +IRG EED + Sbjct: 86 SIVIEVAEPHSLDSSCPAGVSPCLADGALRVLLDGDEALFAHGTVSLGLGVEISAVNLPGACRSFGFEKYWEHK--KLEYAT----GGRQLRTQPSMGEWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGILGETFVPTRDASGKPIMTGMEAIRGTEEDCK 301
BLAST of mRNA_C-tenellus_contig11029.1.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE) HSP 1 Score: 186 bits (473), Expect = 7.600e-54 Identity = 108/231 (46.75%), Postives = 140/231 (60.61%), Query Frame = 1 Query: 7 TVEILVNDTTNIQTFCGHGKS-CLADGALTVRLNGIE-VTAPAHYFVGNGMEVSTANLPGECRPFGFEKYWQRKVHEAELATQSEQSSRALRDVKDMDEWILSDLAKTNPDECESNVRNV-AEEGNLFNLQSEHISFQIVTPTMTLRLNHGKLHQLAMPDPSGLFDLPDHLTYQINVGFVEVGLGSMPQGILGETAVPNTDKDGSPIREEMGSIRGGEEDYRVNDILGTDF 690 ++ I V + +I++ C G S CLADG+L V LNG E ++AP + +G+ V+ NLPGECR FGFE YW+RK E + + R L + + M +W+L D TN DEC V + G LF LQSEH SFQIVTPT T+RL+HG+LHQ+A DP+ FDLPDH T+Q+N+G + GILGET+ P D G I M +IRG EEDYRV L F Sbjct: 155 SIVIEVKNPHDIESACPAGVSPCLADGSLRVMLNGKEELSAPGSVALADGVIVTAVNLPGECRSFGFEHYWERKKLE------NARHGRHLGE-QSMGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGILGETSTPTKDAYGQDIMTGMEAIRGSEEDYRVAGPLDVTF 378
BLAST of mRNA_C-tenellus_contig11029.1.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE) HSP 1 Score: 162 bits (409), Expect = 2.810e-44 Identity = 100/225 (44.44%), Postives = 134/225 (59.56%), Query Frame = 1 Query: 7 TVEILVNDTTNIQTFCGHGKS-CLADGALTVRLNGIE-VTAPAHYFVGNGMEVSTANLPGECRPFGFEKYWQRKVHEAELATQSEQSSRALRDVKDMDEWILSDLAKTNPDECESNV-RNVAE--EGNLFNLQSEHISFQIVTPTMTLRLNHGKLHQLAMPDPSGLFDLPDHLTYQINVGFVEVGLGSMPQGILGETAVPNTDKDGSPIREEMGSIRGGEEDYRV 666 +V I V D ++++ C G + CLA+GAL+V L+G E ++AP + M+VS NLPG CR FGFEKYW+RK E A SS+ +DM +WIL D TN EC V R+V E +G LF +SEH SFQIV P T+RL+HG+LHQ+A + LPDH T+Q+N+ +G QG+LGET VP D DG + M SIRG +E+ + Sbjct: 122 SVVITVKDPHSLESSCPAGVTPCLANGALSVSLDGKEALSAPGVVEMAPNMKVSVVNLPGACRSFGFEKYWERKKLEYAQAGGRRLSSKD----QDMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHGRLHQIAQ------YGLPDHSTWQMNLAIDSDSVGVGAQGVLGETLVPTRDADGEYVMHGMESIRGTQEECEL 336
BLAST of mRNA_C-tenellus_contig11029.1.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE) HSP 1 Score: 168 bits (425), Expect = 4.020e-44 Identity = 103/233 (44.21%), Postives = 134/233 (57.51%), Query Frame = 1 Query: 7 TVEILVNDTTNIQTFCGHGKS-CLADGALTVRLNGIE-VTAPAHYFVGNGMEVSTANLPGECRPFGFEKYWQRKVHEAELATQSEQSSRALRDVKDMDEWILSDLAKTNPDECESNV-RNVA--EEGNLFNLQSEHISFQIVTPTMTLRLNHGKLHQLAMPDPSGLFDLPDHLTYQINVGFVEVGLGSMPQGILGETAVPNTDKDGSPIREEMGSIRGGEEDYRVNDILGTDF 690 ++ I V D ++ + C G S CLADG+L V L+G E + AP + + + VS N+PG CR FGFEKYW+RK E A R L + M EWIL D TN EC V R++A E+G+LF QSEH SFQIVTP +RL+HG+LHQ+A F LPDH+T+Q+N+ + +G+LGET VP G I M +IRG +EDY V LG DF Sbjct: 846 SIIISVKDPYSLDSDCSPGVSPCLADGSLIVVLDGNETLLAPGAVELASDVMVSAVNIPGACRSFGFEKYWERKKLEYAQA-----GGRRLSVQQSMGEWILGDPTATNMAECTEYVARHIAGGEDGDLFTHQSEHASFQIVTPAAIIRLSHGRLHQIAQ------FGLPDHMTWQMNLAVDHNDVSLNAKGVLGETMVPTRTVSGEYIMHGMEAIRGTQEDYHVEGPLGLDF 1067
BLAST of mRNA_C-tenellus_contig11029.1.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE) HSP 1 Score: 162 bits (411), Expect = 2.620e-42 Identity = 101/233 (43.35%), Postives = 132/233 (56.65%), Query Frame = 1 Query: 7 TVEILVNDTTNIQTFCGHGKS-CLADGALTVRLNGIEVT-APAHYFVGNGMEVSTANLPGECRPFGFEKYWQRKVHEAELATQSEQSSRALRDVKDMDEWILSDLAKTNPDECESNV-RNVAE--EGNLFNLQSEHISFQIVTPTMTLRLNHGKLHQLAMPDPSGLFDLPDHLTYQINVGFVEVGLGSMPQGILGETAVPNTDKDGSPIREEMGSIRGGEEDYRVNDILGTDF 690 ++ I V D N+ + C G S CLADG+L V L+G E AP + ++VS N+PG CR FGFEKYW+RK E A R L + M EWIL D TN +EC V R+VA +G+LF QSEH SFQIVTPT +RL+HG+ HQ+A LPDH+T+Q+N+ + +G+LGET +P G + M +IRG EEDY V+ LG F Sbjct: 664 SIIISVKDPHNLDSDCPPGVSPCLADGSLIVVLDGNETLFAPGAVELAPDVKVSAVNIPGACRSFGFEKYWERKKLEYAQA-----GGRGLLTEQSMGEWILGDPTATNVEECTEYVARHVAGSVDGDLFAHQSEHTSFQIVTPTAVVRLSHGRRHQIAE------LGLPDHVTWQMNLAVDHNDVSLSAKGVLGETLIPTRAASGEYVMHGMEAIRGTEEDYHVDGPLGLGF 885
BLAST of mRNA_C-tenellus_contig11029.1.1 vs. uniprot
Match: A0A6H5L2W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W0_9PHAE) HSP 1 Score: 121 bits (303), Expect = 7.650e-30 Identity = 81/221 (36.65%), Postives = 106/221 (47.96%), Query Frame = 1 Query: 7 TVEILVNDTTNIQTFCGHGKS-CLADGALTVRLNGIE-VTAPAHYFVGNGMEVSTANLPGECRPFGFEKYWQRKVHEAELATQSEQSSRALRDVKDMDEWILSDLAKTNPDECESNVRNVAEEG--NLFNLQSEHISFQIVTPTMTLRLNHGKLHQLAMPDPSGLFDLPDHLTYQINVGFVEVGLGSMPQGILGETAVPNTDKDGSPIREEMGSIRGGEED 657 T+ I V D ++ + C G S CLADGALTV+L+G + AP G + +S NLPG CR FGFE+YW+RK E + SS ++ + D WIL D TN EC V G LF EH SFQI+TP T+R +N+ + + GILGET P D +GSPI + M SIRG ++D Sbjct: 63 TIVITVTDPHSLDSACPVGVSPCLADGALTVQLDGKHALLAPGEVLFGPQVAISAVNLPGACRSFGFEEYWERKKQEYARGGRRLPSSTQMQAMSD---WILGDPTATNMAECTEYVVEATRNGLGGLFEHDLEHTSFQILTPMGTIRRAMAAFTSFPC----------------MNLAIDRIDVSPNATGILGETQKPTLDANGSPIMQGMASIRGAQDD 264 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11029.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11029.1.1 >prot_C-tenellus_contig11029.1.1 ID=prot_C-tenellus_contig11029.1.1|Name=mRNA_C-tenellus_contig11029.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=234bp MKTVEILVNDTTNIQTFCGHGKSCLADGALTVRLNGIEVTAPAHYFVGNGback to top mRNA from alignment at C-tenellus_contig11029:124..825+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11029.1.1 ID=mRNA_C-tenellus_contig11029.1.1|Name=mRNA_C-tenellus_contig11029.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=702bp|location=Sequence derived from alignment at C-tenellus_contig11029:124..825+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11029:124..825+ >mRNA_C-tenellus_contig11029.1.1 ID=mRNA_C-tenellus_contig11029.1.1|Name=mRNA_C-tenellus_contig11029.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=702bp|location=Sequence derived from alignment at C-tenellus_contig11029:124..825+ (Choristocarpus tenellus KU2346)back to top |