prot_C-tenellus_contig1092.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1092.1.1
Unique Nameprot_C-tenellus_contig1092.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length435
Homology
BLAST of mRNA_C-tenellus_contig1092.1.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 3.000e-83
Identity = 179/438 (40.87%), Postives = 229/438 (52.28%), Query Frame = 0
Query:    3 SKWCHPFVIPPDHHTNRKILNKLSAAEAEYDDGI---GGRAPPEFKIGVRWEHTSGTRSIYLYAKVWVLNKTGVSLAYQSPGMRKQPENRRVGDGHSKAAKRMPKFPLYHTDEDALSFSRDTLSASKLDAPAGMEDSGHGQGLGKDNEERNRGEQTLPLMLHCRSKMLQLMPLAMAYHAQDPPLYLGDPRSQSSESPLPCISFSGRRTRGHHSGTGGGKDYLEGRYQMYFDNPSLQVSLPKELTRPDRRRIHLLTWDDPSEGYMSFIPSKDCIVYVGLDIRLANASVGPPKWLALLGYTRCTHLTATAV-ARPHDTAQCGFAIFRRFHRGMVKALLGPNVDAHGGCGDSITEGREQGVGGGKLPSAMYFVVVVEASAEEIATEVDVGHVVMHRNVKQQVCFYRSHRWRLNPAFSPGDPLYVDRGASYS-VAALPHGAR 435
            S +C  ++I    HTNR +LN++ + EA +  G    GG   PEFK G  WEHT G R I+LY+KVWVLNKTGVSLAY++    K+       D   K   R P    Y TD D + FSR    A +  +  G + +G G     +      GE   PLML CR+  LQ MP AMA  A    L L + RS  SE PLPC++                       + +Y D P  +V LP+E+    RRR+HLLT    + G ++F PS+DC VY+GLD RL  A  GPPKWLAL G+ R   L  +    +P D A  GF ++ RF RG+    LG N+D  G   D ++E R     GG  P+AMYFVVVV     E   EVD+G V MHR+V +       HRWR+ P F PGDP Y DR +S + V  LP   R
Sbjct: 1586 SDFCKSYIIEAKRHTNRTLLNRMKSKEAVFSHGARGSGGARRPEFKFGAVWEHTPGNRHIHLYSKVWVLNKTGVSLAYRASIPTKE------DDRKEKVFVRRPYNASYRTDGDTMLFSRYMTGAKRCKSFGGGDKTGGGGATASEIG----GEAGFPLMLTCRANTLQTMPYAMADSAVGAALLLSETRSSKSEQPLPCLTVPAADDAXXXXXXXXXXXAESSSWPLYCDYPPARVRLPEEVVSERRRRVHLLTLRSDT-GSVTFTPSRDCRVYIGLDKRLLAADPGPPKWLALQGFERREGLDVSVTDVQPADLAPQGFGLYSRFCRGLSVVPLGQNLDHDG---DGVSERR-----GG--PAAMYFVVVVRVPESEAVGEVDIGPVAMHRSVGKIFDMREHHRWRMKPNFKPGDPCYTDRPSSENTVTGLPEKLR 2002          
BLAST of mRNA_C-tenellus_contig1092.1.1 vs. uniprot
Match: A0A6H5KB17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 5.050e-75
Identity = 174/434 (40.09%), Postives = 226/434 (52.07%), Query Frame = 0
Query:    3 SKWCHPFVIPPDHHTNRKILNKLSAAEAEYDDGI---GGRAPPEFKIGVRWEHTSGTRSIYLYAKVWVLNKTGVSLAYQSPGMRKQPENRRVGDGHSKAAKRMPKFPLYHTDEDALSFSRDTLSASKLDAPAGMEDSGHGQGLGKDNEERNRGEQTLPLMLHCRSKMLQLMPLAMAYHAQDPPLYLGDPRSQSSESPLPCISFSGRRTRGHHSGTGGGKDYLEGRYQMYFDNPSLQVSLPKELTRPDRRRIHLLTWDDPSEGYMSFIPSKDCIVYVGLDIRLANASVGPPKWLALLGYTRCTHLTATAV-ARPHDTAQCGFAIFRRFHRGMVKALLGPNVDAHGGCGDSITEGREQGVGGGKLPSAMYFVVVVEASAEEIATEVDVGHVVMHRNVKQQVCFYRSHRWRLNPAFSPGDPLYVDRGASYS-VAALP 431
            S +C  ++I    HTNR +LN++ + EA +  G    GG   PEFK GV WEHT G R I+LY+KVWVLNKTGVSLAY++    K        D   K   R P    Y TD D + FSR      +  +  G + +G G    ++      GE   PLML C +  LQ MP AMA  A    L L + RS  SE PLPC++          +   G +      + +Y D P  +V LP+E+    RRR+HLLT    + G ++F PS+DC VY+GLD RL  A  GPPKWLAL G+ R   L  +    +P D A  GF ++ RF RG+    LG N+D  G   D ++E R     GG  P+AMYFVVV+     E   EVD+G V MHR+V + V    S R  L      GDP Y DR +S + V  LP
Sbjct:  173 SDFCKSYIIEAKRHTNRTLLNRIKSKEAVFSHGARGSGGARRPEFKFGVIWEHTPGNRHIHLYSKVWVLNKTGVSLAYRASIPTKD------DDRKEKVFVRRPYNASYRTDGDTMLFSRYMTGTKRCKSFGGGDKTGGGGATAREIG----GEAGFPLMLTCHANTLQTMPYAMADSAVGADLLLSETRSSKSEQPLPCLTVPAADDADADAXXXGAES---SSWPLYCDYPPARVRLPEEVLSEGRRRVHLLTLRSDT-GSVTFTPSRDCRVYIGLDKRLLAADPGPPKWLALQGFERREGLDVSVTDVQPADLAPQGFGLYSRFCRGLSVVPLGKNLDHDG---DGVSERR-----GG--PAAMYFVVVLRVPESEAVGEVDIGPVAMHRSVAKIVSSEASVRGFL------GDPCYTDRPSSENTVTGLP 576          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1092.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB77_ECTSI3.000e-8340.87SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KB17_9PHAE5.050e-7540.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1092contigC-tenellus_contig1092:2202..4899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1092.1.1mRNA_C-tenellus_contig1092.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig1092 2202..4899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1092.1.1 ID=prot_C-tenellus_contig1092.1.1|Name=mRNA_C-tenellus_contig1092.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=435bp
MYSKWCHPFVIPPDHHTNRKILNKLSAAEAEYDDGIGGRAPPEFKIGVRW
EHTSGTRSIYLYAKVWVLNKTGVSLAYQSPGMRKQPENRRVGDGHSKAAK
RMPKFPLYHTDEDALSFSRDTLSASKLDAPAGMEDSGHGQGLGKDNEERN
RGEQTLPLMLHCRSKMLQLMPLAMAYHAQDPPLYLGDPRSQSSESPLPCI
SFSGRRTRGHHSGTGGGKDYLEGRYQMYFDNPSLQVSLPKELTRPDRRRI
HLLTWDDPSEGYMSFIPSKDCIVYVGLDIRLANASVGPPKWLALLGYTRC
THLTATAVARPHDTAQCGFAIFRRFHRGMVKALLGPNVDAHGGCGDSITE
GREQGVGGGKLPSAMYFVVVVEASAEEIATEVDVGHVVMHRNVKQQVCFY
RSHRWRLNPAFSPGDPLYVDRGASYSVAALPHGAR
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