prot_C-tenellus_contig9978.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9978.2.1
Unique Nameprot_C-tenellus_contig9978.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length186
Homology
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: D7FKR5_ECTSI (Iron-sulfur cluster assembly protein, similar to nifU n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR5_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 8.360e-90
Identity = 146/186 (78.49%), Postives = 162/186 (87.10%), Query Frame = 0
Query:    4 GVGPDGMARPNA---MASPVPDAPT---AAACNDLDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEFKY 183
            GVGPDGMA P        PVPDAP    A+ CNDL+FTLENVD VL+EVRPYL+ADGGNV+VMGVD D RVVKLALQGACGSCPSSTTTMKMGIERVLNENF N+GGVEQVDEASGNAMAE TTAVVEAILEPLRPAMVAMRA V+VLS +DG V L+Y GHRKVAYGI++ALLDNPLI++++F+Y
Sbjct:  307 GVGPDGMAAPPLPPXXXXPVPDAPPTPPASECNDLEFTLENVDKVLDEVRPYLIADGGNVRVMGVDIDRRVVKLALQGACGSCPSSTTTMKMGIERVLNENFLNMGGVEQVDEASGNAMAEATTAVVEAILEPLRPAMVAMRAKVEVLSVLDGHVKLTYSGHRKVAYGIQMALLDNPLIQSIDFEY 492          
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A836CLJ7_9STRA (NifU-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ7_9STRA)

HSP 1 Score: 199 bits (507), Expect = 7.490e-59
Identity = 99/153 (64.71%), Postives = 120/153 (78.43%), Query Frame = 0
Query:   29 CNDLDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 181
            C  LDFT++NVD VL+EVRPYL+ADGGN +V+ VD++ RVV LALQGACGSCPSST TM+MGIERVL ENF NLGGV +V+E  G  +A+VT  VVE+ILEP+RPA+ AM   VKV+S  DG+V L Y G  K+ YGIELA  DNPL+  V+F
Sbjct:  309 CRALDFTIDNVDKVLDEVRPYLIADGGNCRVVAVDQETRVVSLALQGACGSCPSSTVTMQMGIERVLKENFENLGGVVRVEE-DGGGLAQVTADVVESILEPIRPAIKAMNGQVKVVSVFDGVVTLGYSGSPKIKYGIELACKDNPLVHQVKF 460          
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A6S9FDF6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FDF6_HETAK)

HSP 1 Score: 169 bits (429), Expect = 6.610e-48
Identity = 89/163 (54.60%), Postives = 113/163 (69.33%), Query Frame = 0
Query:   20 VPDAPTAAACNDLDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEAS-GNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 181
            VP     + C +LD T ENVD VLEEVRPYL++DGGN+KV+GVD D R +++ALQGACGSCPSST TM+MG+ERVL ENFA L  VE V++        E+T  +V+ IL+ +RPA+ AM   + V SA DG V L Y+G  K+ +G+EL L DN LI  V F
Sbjct:  235 VPPEVKQSECKNLDLTPENVDKVLEEVRPYLISDGGNIKVVGVDTDRRAIQVALQGACGSCPSSTVTMQMGVERVLRENFAGLQPVEVVEDPDLSTENKELTVELVDGILDQIRPAIRAMGGSLAVASARDGRVELDYQGPDKIRFGVELTLKDNELINEVVF 397          
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S0NWT9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NWT9_9EUKA)

HSP 1 Score: 152 bits (385), Expect = 3.950e-43
Identity = 90/178 (50.56%), Postives = 117/178 (65.73%), Query Frame = 0
Query:    8 DGMARPNAMASPV-PDAPTAAACND--LDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGV-EQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 181
            +G +   A++SP  P    +AA ++  LD T+ NVD VL+EVRPYLVADGGNV V+ VD++ R V L LQGAC SCPSST TMKMGIERVL ENF +LG V +  DE S +    +T  +V+ IL  L PA+  +   +++ SA+D  V L Y+G  K+  GIELAL DN  I  V+F
Sbjct:   49 EGSSANTALSSPFEPPLGGSAAASEKGLDLTIANVDKVLDEVRPYLVADGGNVDVVRVDEETRDVVLQLQGACSSCPSSTVTMKMGIERVLKENFLDLGEVIDASDELSADVAPVLTPELVQDILSQLLPAISGLGGAIELESAVDACVTLRYRGPEKIKLGIELALKDNDAISDVKF 226          
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S1D7D5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7D5_CYCTE)

HSP 1 Score: 147 bits (371), Expect = 1.040e-41
Identity = 80/151 (52.98%), Postives = 108/151 (71.52%), Query Frame = 0
Query:   34 FTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQV--DEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAI-DGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 181
            F+ E VD +L+EVRPYLVADGGNV V  VD + + V L L+GACGSCPSST TM+MGIERVL ENFA+LG V QV  DE    A  E+T A VEA ++ ++PA++AM   +++     +G+V ++++G  KV  G+ELALLD P ++ V+F
Sbjct:   26 FSKETVDKILDEVRPYLVADGGNVSVERVDAETKDVYLKLEGACGSCPSSTVTMQMGIERVLKENFADLGQVVQVQDDEGENEAPTELTYAAVEAEIKRIQPAILAMGGVIRIEKVEPNGVVEINFRGGSKVQQGLELALLDVPFVKHVKF 176          
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S4B0G1_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B0G1_CHRCT)

HSP 1 Score: 149 bits (376), Expect = 4.040e-40
Identity = 84/175 (48.00%), Postives = 109/175 (62.29%), Query Frame = 0
Query:   13 PNAMASPVPDAPTAAACNDLDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEAS------GNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 181
            P   A+P P    ++    L+ T  NVD VL+EVRPYL+ADGGNVKV  +D D R V L LQGACGSCPSST TMKMGIERVL E FA++  V  V++ +       +A + +    V   L  + PA+  +   V+V+S  DG V L Y+G  K+ +GIELAL DN L++ VEF
Sbjct:  220 PTVAAAPAP----SSTATGLELTAANVDTVLDEVRPYLIADGGNVKVARIDMDTRSVYLQLQGACGSCPSSTVTMKMGIERVLREKFADIREVAAVEDDAEDVTEGSDAASGLDAEAVLGTLSQIMPAITGLGGSVEVVSVDDGNVQLRYQGPPKIKFGIELALKDNALVKKVEF 390          
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S0UKW9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKW9_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.020e-39
Identity = 83/167 (49.70%), Postives = 108/167 (64.67%), Query Frame = 0
Query:   22 DAPTAAACND---LDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAID-GLVILSYKGHRKVAYGIELALLDNPLIRAVEFKYE 184
            D PTA    D   L F  ENVD VL+E+RPYL++DGGNV V  VD++ + V L L+GACGSCPSST TM+MGIERVL ENFA+LG V QV+E       E+T   VE  +  ++PA++AM   V VL     G + + ++G  K+  G+ELALLD   ++ VEF  E
Sbjct:  173 DQPTAYITTDGESLSFNKENVDTVLDEIRPYLISDGGNVSVDSVDEETKNVYLKLEGACGSCPSSTVTMQMGIERVLKENFADLGEVLQVEEEGEEKPKELTYQTVENEVNRIKPAIIAMGGLVDVLEVDPIGTIKVRFRGANKIRSGLELALLDIEFVKHVEFVME 339          
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S0QKZ8_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QKZ8_9CRYP)

HSP 1 Score: 140 bits (354), Expect = 2.450e-39
Identity = 73/152 (48.03%), Postives = 105/152 (69.08%), Query Frame = 0
Query:   32 LDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKV--LSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 181
            L FT+ENVD +L+EVRPY++ADGGN KV  VD     V+L L+GACG+CPSST T+KMG+ERVL E + +  G  QV   + +A   ++  +VE++L+P+RPA+V +   +KV  +    G V + YKG +K+ +G+EL L ++PLIR V F
Sbjct:   13 LAFTMENVDRILDEVRPYMMADGGNCKVTAVDPVTGDVRLVLEGACGTCPSSTVTLKMGVERVLREKYGDRLG--QVISEAPSAAGGLSVELVESLLDPVRPAVVGLGGSLKVREVDLATGQVTIEYKGPQKLTFGLELTLKESPLIRQVTF 162          
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A448ZD88_9STRA (NifU domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD88_9STRA)

HSP 1 Score: 146 bits (369), Expect = 5.660e-39
Identity = 87/176 (49.43%), Postives = 115/176 (65.34%), Query Frame = 0
Query:   14 NAMASPVPDAPTAAACND---LDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAID--GLVILSYKGHRKVAYGIELALLDNPLIRAVEFKYE 184
            +A+ SP  D PT     D   L F  ENVD VL+E+RPYL++DGGNV V  VD++ + V L L+GACGSCPSST TM+MGIERVL ENFANLG V QV++       E+T  VVE  +  ++PA++AM   V +L  +D  G V + ++G  KV  G+E+ALLD   ++ VEF  E
Sbjct:  234 DAVVSPF-DQPTVYTTTDGDALPFNQENVDKVLDEIRPYLISDGGNVSVQRVDEETQNVYLKLEGACGSCPSSTVTMQMGIERVLKENFANLGEVLQVEDEDEKPK-ELTYQVVEKEVNRIKPAIIAMGGLVDILE-VDAIGTVKIKFRGANKVRQGLEMALLDIDFVKHVEFVME 406          
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S2SCE1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCE1_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.550e-38
Identity = 82/157 (52.23%), Postives = 106/157 (67.52%), Query Frame = 0
Query:   27 AACNDLDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLS--AIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 181
            A+   LDFT+EN+D VL+EVRPYLVADGGN+KV+ ++ + R + + LQGACGSCPSSTTTMKMG+ERVL E + +LG V  V E +  A AE++TA VEA L  L PA+  +   V V S  A  G V L YKG + +  GI+ AL D+  +  V F
Sbjct:  255 ASAGGLDFTMENIDQVLDEVRPYLVADGGNIKVLSIEPEPRNIIVELQGACGSCPSSTTTMKMGVERVLKEQWPDLGEVVSVSETADLA-AELSTADVEAKLAQLLPAITGLGGAVTVASVDAASGKVELEYKGPKALRGGIDQALRDDKRVTEVLF 410          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKR5_ECTSI8.360e-9078.49Iron-sulfur cluster assembly protein, similar to n... [more]
A0A836CLJ7_9STRA7.490e-5964.71NifU-like domain-containing protein n=1 Tax=Tribon... [more]
A0A6S9FDF6_HETAK6.610e-4854.60Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0NWT9_9EUKA3.950e-4350.56Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S1D7D5_CYCTE1.040e-4152.98Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4B0G1_CHRCT4.040e-4048.00Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S0UKW9_9STRA1.020e-3949.70Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S0QKZ8_9CRYP2.450e-3948.03Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A448ZD88_9STRA5.660e-3949.43NifU domain-containing protein n=1 Tax=Pseudo-nitz... [more]
A0A7S2SCE1_9STRA3.550e-3852.23Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 32..113
e-value: 7.0E-27
score: 95.3
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 35..111
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPFAMPF01106NifUcoord: 39..105
e-value: 2.4E-22
score: 78.9
NoneNo IPR availablePANTHERPTHR11178:SF15NIFU-LIKE PROTEIN 1, CHLOROPLASTICcoord: 27..172
NoneNo IPR availablePANTHERPTHR11178IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATEDcoord: 27..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9978contigC-tenellus_contig9978:2240..5384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9978.2.1mRNA_C-tenellus_contig9978.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9978 2240..5411 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9978.2.1 ID=prot_C-tenellus_contig9978.2.1|Name=mRNA_C-tenellus_contig9978.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=186bp
MLPGVGPDGMARPNAMASPVPDAPTAAACNDLDFTLENVDMVLEEVRPYL
VADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFA
NLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDG
LVILSYKGHRKVAYGIELALLDNPLIRAVEFKYEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034904FSCA_dom_sf
IPR001075NIF_FeS_clus_asmbl_NifU_C