mRNA_C-tenellus_contig9978.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: D7FKR5_ECTSI (Iron-sulfur cluster assembly protein, similar to nifU n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR5_ECTSI) HSP 1 Score: 291 bits (744), Expect = 7.300e-94 Identity = 153/198 (77.27%), Postives = 171/198 (86.36%), Query Frame = 1 Query: 1 SPFSSDGIDMLPGVGPDGMARPNA---MASPVPDAPT---AAACNDLDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEFKY 576 SPFSSDG+ + GVGPDGMA P PVPDAP A+ CNDL+FTLENVD VL+EVRPYL+ADGGNV+VMGVD D RVVKLALQGACGSCPSSTTTMKMGIERVLNENF N+GGVEQVDEASGNAMAE TTAVVEAILEPLRPAMVAMRA V+VLS +DG V L+Y GHRKVAYGI++ALLDNPLI++++F+Y Sbjct: 297 SPFSSDGMPV--GVGPDGMAAPPLPPXXXXPVPDAPPTPPASECNDLEFTLENVDKVLDEVRPYLIADGGNVRVMGVDIDRRVVKLALQGACGSCPSSTTTMKMGIERVLNENFLNMGGVEQVDEASGNAMAEATTAVVEAILEPLRPAMVAMRAKVEVLSVLDGHVKLTYSGHRKVAYGIQMALLDNPLIQSIDFEY 492
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A836CLJ7_9STRA (NifU-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ7_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.050e-58 Identity = 99/153 (64.71%), Postives = 120/153 (78.43%), Query Frame = 1 Query: 112 CNDLDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 570 C LDFT++NVD VL+EVRPYL+ADGGN +V+ VD++ RVV LALQGACGSCPSST TM+MGIERVL ENF NLGGV +V+E G +A+VT VVE+ILEP+RPA+ AM VKV+S DG+V L Y G K+ YGIELA DNPL+ V+F Sbjct: 309 CRALDFTIDNVDKVLDEVRPYLIADGGNCRVVAVDQETRVVSLALQGACGSCPSSTVTMQMGIERVLKENFENLGGVVRVEE-DGGGLAQVTADVVESILEPIRPAIKAMNGQVKVVSVFDGVVTLGYSGSPKIKYGIELACKDNPLVHQVKF 460
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A6S9FDF6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FDF6_HETAK) HSP 1 Score: 169 bits (429), Expect = 9.140e-48 Identity = 89/163 (54.60%), Postives = 113/163 (69.33%), Query Frame = 1 Query: 85 VPDAPTAAACNDLDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEAS-GNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 570 VP + C +LD T ENVD VLEEVRPYL++DGGN+KV+GVD D R +++ALQGACGSCPSST TM+MG+ERVL ENFA L VE V++ E+T +V+ IL+ +RPA+ AM + V SA DG V L Y+G K+ +G+EL L DN LI V F Sbjct: 235 VPPEVKQSECKNLDLTPENVDKVLEEVRPYLISDGGNIKVVGVDTDRRAIQVALQGACGSCPSSTVTMQMGVERVLRENFAGLQPVEVVEDPDLSTENKELTVELVDGILDQIRPAIRAMGGSLAVASARDGRVELDYQGPDKIRFGVELTLKDNELINEVVF 397
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S0NWT9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NWT9_9EUKA) HSP 1 Score: 153 bits (387), Expect = 2.710e-43 Identity = 92/187 (49.20%), Postives = 119/187 (63.64%), Query Frame = 1 Query: 22 IDMLPGVGPDGMARPNAMASPV-PDAPTAAACND--LDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGV-EQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 570 I G +G + A++SP P +AA ++ LD T+ NVD VL+EVRPYLVADGGNV V+ VD++ R V L LQGAC SCPSST TMKMGIERVL ENF +LG V + DE S + +T +V+ IL L PA+ + +++ SA+D V L Y+G K+ GIELAL DN I V+F Sbjct: 40 ISQEAGYTSEGSSANTALSSPFEPPLGGSAAASEKGLDLTIANVDKVLDEVRPYLVADGGNVDVVRVDEETRDVVLQLQGACSSCPSSTVTMKMGIERVLKENFLDLGEVIDASDELSADVAPVLTPELVQDILSQLLPAISGLGGAIELESAVDACVTLRYRGPEKIKLGIELALKDNDAISDVKF 226
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S1D7D5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7D5_CYCTE) HSP 1 Score: 147 bits (371), Expect = 1.420e-41 Identity = 80/151 (52.98%), Postives = 108/151 (71.52%), Query Frame = 1 Query: 127 FTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQV--DEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAI-DGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 570 F+ E VD +L+EVRPYLVADGGNV V VD + + V L L+GACGSCPSST TM+MGIERVL ENFA+LG V QV DE A E+T A VEA ++ ++PA++AM +++ +G+V ++++G KV G+ELALLD P ++ V+F Sbjct: 26 FSKETVDKILDEVRPYLVADGGNVSVERVDAETKDVYLKLEGACGSCPSSTVTMQMGIERVLKENFADLGQVVQVQDDEGENEAPTELTYAAVEAEIKRIQPAILAMGGVIRIEKVEPNGVVEINFRGGSKVQQGLELALLDVPFVKHVKF 176
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S4B0G1_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B0G1_CHRCT) HSP 1 Score: 149 bits (376), Expect = 5.530e-40 Identity = 84/175 (48.00%), Postives = 109/175 (62.29%), Query Frame = 1 Query: 64 PNAMASPVPDAPTAAACNDLDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEAS------GNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 570 P A+P P ++ L+ T NVD VL+EVRPYL+ADGGNVKV +D D R V L LQGACGSCPSST TMKMGIERVL E FA++ V V++ + +A + + V L + PA+ + V+V+S DG V L Y+G K+ +GIELAL DN L++ VEF Sbjct: 220 PTVAAAPAP----SSTATGLELTAANVDTVLDEVRPYLIADGGNVKVARIDMDTRSVYLQLQGACGSCPSSTVTMKMGIERVLREKFADIREVAAVEDDAEDVTEGSDAASGLDAEAVLGTLSQIMPAITGLGGSVEVVSVDDGNVQLRYQGPPKIKFGIELALKDNALVKKVEF 390
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S0UKW9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKW9_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.390e-39 Identity = 83/167 (49.70%), Postives = 108/167 (64.67%), Query Frame = 1 Query: 91 DAPTAAACND---LDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAID-GLVILSYKGHRKVAYGIELALLDNPLIRAVEFKYE 579 D PTA D L F ENVD VL+E+RPYL++DGGNV V VD++ + V L L+GACGSCPSST TM+MGIERVL ENFA+LG V QV+E E+T VE + ++PA++AM V VL G + + ++G K+ G+ELALLD ++ VEF E Sbjct: 173 DQPTAYITTDGESLSFNKENVDTVLDEIRPYLISDGGNVSVDSVDEETKNVYLKLEGACGSCPSSTVTMQMGIERVLKENFADLGEVLQVEEEGEEKPKELTYQTVENEVNRIKPAIIAMGGLVDVLEVDPIGTIKVRFRGANKIRSGLELALLDIEFVKHVEFVME 339
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S0QKZ8_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QKZ8_9CRYP) HSP 1 Score: 140 bits (354), Expect = 3.340e-39 Identity = 73/152 (48.03%), Postives = 105/152 (69.08%), Query Frame = 1 Query: 121 LDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKV--LSAIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 570 L FT+ENVD +L+EVRPY++ADGGN KV VD V+L L+GACG+CPSST T+KMG+ERVL E + + G QV + +A ++ +VE++L+P+RPA+V + +KV + G V + YKG +K+ +G+EL L ++PLIR V F Sbjct: 13 LAFTMENVDRILDEVRPYMMADGGNCKVTAVDPVTGDVRLVLEGACGTCPSSTVTLKMGVERVLREKYGDRLG--QVISEAPSAAGGLSVELVESLLDPVRPAVVGLGGSLKVREVDLATGQVTIEYKGPQKLTFGLELTLKESPLIRQVTF 162
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A448ZD88_9STRA (NifU domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD88_9STRA) HSP 1 Score: 146 bits (369), Expect = 7.740e-39 Identity = 87/176 (49.43%), Postives = 115/176 (65.34%), Query Frame = 1 Query: 67 NAMASPVPDAPTAAACND---LDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLSAID--GLVILSYKGHRKVAYGIELALLDNPLIRAVEFKYE 579 +A+ SP D PT D L F ENVD VL+E+RPYL++DGGNV V VD++ + V L L+GACGSCPSST TM+MGIERVL ENFANLG V QV++ E+T VVE + ++PA++AM V +L +D G V + ++G KV G+E+ALLD ++ VEF E Sbjct: 234 DAVVSPF-DQPTVYTTTDGDALPFNQENVDKVLDEIRPYLISDGGNVSVQRVDEETQNVYLKLEGACGSCPSSTVTMQMGIERVLKENFANLGEVLQVEDEDEKPK-ELTYQVVEKEVNRIKPAIIAMGGLVDILE-VDAIGTVKIKFRGANKVRQGLEMALLDIDFVKHVEFVME 406
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Match: A0A7S2SCE1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCE1_9STRA) HSP 1 Score: 144 bits (364), Expect = 4.840e-38 Identity = 82/157 (52.23%), Postives = 106/157 (67.52%), Query Frame = 1 Query: 106 AACNDLDFTLENVDMVLEEVRPYLVADGGNVKVMGVDKDARVVKLALQGACGSCPSSTTTMKMGIERVLNENFANLGGVEQVDEASGNAMAEVTTAVVEAILEPLRPAMVAMRADVKVLS--AIDGLVILSYKGHRKVAYGIELALLDNPLIRAVEF 570 A+ LDFT+EN+D VL+EVRPYLVADGGN+KV+ ++ + R + + LQGACGSCPSSTTTMKMG+ERVL E + +LG V V E + A AE++TA VEA L L PA+ + V V S A G V L YKG + + GI+ AL D+ + V F Sbjct: 255 ASAGGLDFTMENIDQVLDEVRPYLVADGGNIKVLSIEPEPRNIIVELQGACGSCPSSTTTMKMGVERVLKEQWPDLGEVVSVSETADLA-AELSTADVEAKLAQLLPAITGLGGAVTVASVDAASGKVELEYKGPKALRGGIDQALRDDKRVTEVLF 410 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9978.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9978.2.1 >prot_C-tenellus_contig9978.2.1 ID=prot_C-tenellus_contig9978.2.1|Name=mRNA_C-tenellus_contig9978.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=186bp MLPGVGPDGMARPNAMASPVPDAPTAAACNDLDFTLENVDMVLEEVRPYLback to top mRNA from alignment at C-tenellus_contig9978:2240..5411- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9978.2.1 ID=mRNA_C-tenellus_contig9978.2.1|Name=mRNA_C-tenellus_contig9978.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3172bp|location=Sequence derived from alignment at C-tenellus_contig9978:2240..5411- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9978:2240..5411- >mRNA_C-tenellus_contig9978.2.1 ID=mRNA_C-tenellus_contig9978.2.1|Name=mRNA_C-tenellus_contig9978.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=558bp|location=Sequence derived from alignment at C-tenellus_contig9978:2240..5411- (Choristocarpus tenellus KU2346)back to top |