prot_C-tenellus_contig9949.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9949.2.1
Unique Nameprot_C-tenellus_contig9949.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length138
Homology
[Close]
BLAST of mRNA_C-tenellus_contig9949.2.1 vs. uniprot
Match: A0A6H5KJI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI0_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.500e-11
Identity = 62/138 (44.93%), Postives = 74/138 (53.62%), Query Frame = 0 
Query:    1 SDTDDTEADKENLRMLMLSLGGEEEDEVQQRLGEGEEKGEGNEWQDEGRHRNLQGAS---HTEPGAAAL----VFRGDDTGDDQVVMGLNASYDEGTREGPWNVTGEADAGGGNTLFLSSVKDQHQDISTHLHDISLQ 131
            SDTDDTEA+KENLR LML+LG      V  R G+G+   E     DEG  R+  G S     E G+ A     V  G D  D   VM                 TGEADAGGGNTL +SSV+ Q++DIS+ L D+SLQ
Sbjct: 3707 SDTDDTEAEKENLRELMLALGA-----VDNREGDGDASAE----DDEGGRRHGVGGSVEAGDEAGSIAAGHGDVVSGSDGYDGDHVMAA--------------ATGEADAGGGNTL-MSSVRAQNEDISSRLQDMSLQ 3820
[Close]
BLAST of mRNA_C-tenellus_contig9949.2.1 vs. uniprot
Match: D7FZ31_ECTSI (Viral A-type inclusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ31_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 7.020e-11
Identity = 59/133 (44.36%), Postives = 73/133 (54.89%), Query Frame = 0 
Query:    1 SDTDDTEADKENLRMLMLSLGGEEEDEVQQRLGEGEEKGEGNEWQDEG--RHRNLQGASHTEPGAAALVFRGDDTGDDQVVMGLNASYDEGTREGPWNVTGEADAGGGNTLFLSSVKDQHQDISTHLHDISLQ 131
            SDTDDTEA+KENLR LML+LG      V  R G+G+   E     DEG  RH    G    +        RGD       V+ ++  YD          TGEADAGGGNTL +SSV+ Q++DIS+ L D+SLQ
Sbjct: 3450 SDTDDTEAEKENLRELMLALGA-----VDVRDGDGDASAE----DDEGGRRHGVGDGVEARDEAGNVSAGRGD-------VVSVSDGYDGDHVIAA--ATGEADAGGGNTL-MSSVRAQNEDISSRLQDMSLQ 3563
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9949.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJI0_9PHAE1.500e-1144.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ31_ECTSI7.020e-1144.36Viral A-type inclusion protein n=1 Tax=Ectocarpus ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9949contigC-tenellus_contig9949:3741..4154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9949.2.1mRNA_C-tenellus_contig9949.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9949 3741..4154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9949.2.1 ID=prot_C-tenellus_contig9949.2.1|Name=mRNA_C-tenellus_contig9949.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=138bp
SDTDDTEADKENLRMLMLSLGGEEEDEVQQRLGEGEEKGEGNEWQDEGRH
RNLQGASHTEPGAAALVFRGDDTGDDQVVMGLNASYDEGTREGPWNVTGE
ADAGGGNTLFLSSVKDQHQDISTHLHDISLQSLQVSE*
back to top