prot_C-tenellus_contig994.5.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig994.5.1
Unique Nameprot_C-tenellus_contig994.5.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length176
Homology
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Match: A0A0A9W6P7_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9W6P7_LYGHE)

HSP 1 Score: 94.0 bits (232), Expect = 4.350e-19
Identity = 57/178 (32.02%), Postives = 97/178 (54.49%), Query Frame = 0
Query:    3 WYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFTTGDFTE-IQRMRASLLEKYEGRDLGTLDKLIGVSITVDEDG-ITLDQQLYAESIVMAGMGTTEVQKTSTPLDPGMDFSAKQ---DHEEELDPTIHPYASILGKLIFLAGMTRPDLANSVRELGRRAASPCMRH 175
            WY  L   ++  G   S+ + C+ F+KS DG I I+  YVDD        E +  M+  L   +E +DLG L+ ++G+ +   EDG + ++Q  Y + I+ A     + +  S+P+DP  + S  Q     +E+ +    PY  ++GKL++LA  TRPD+A  V +LG+ +++P  +H
Sbjct:  828 WYETLERKLLEGGMKKSKSESCIYFEKS-DGVIKIILVYVDDLILISSNLEAMSDMKIMLGRNFEMKDLGNLNYILGIEVKRQEDGSLFMNQWKYLQEIITA-FHMIDCKSISSPMDPSQELSKSQCPITVQEKNEIANVPYRRLVGKLMYLAQATRPDIAFFVSKLGQFSSNPGKQH 1003          
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Match: A0A5N6PGV2_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PGV2_9ASTR)

HSP 1 Score: 93.2 bits (230), Expect = 7.450e-19
Identity = 58/175 (33.14%), Postives = 89/175 (50.86%), Query Frame = 0
Query:    2 EWYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFTTG-DFTEIQRMRASLLEKYEGRDLGTLDKLIGVSITVDEDGITLDQQLYAESIVMAGMGTTEVQKTSTPLDPGMDFSAKQDHEEELDPTIHPYASILGKLIFLAGMTRPDLANSVRELGRRAASPCMRH 175
            +WY K   T+  +G+  +  D C+  K+S+ G + ++  YVDD    G D  +I + +A L  K+E +DLG  D ++GV I    +GI+L Q  Y E ++       E+    TP DP +    K +HE         YA I+G ++FL   TRPD+A +V  L R   +P   H
Sbjct:  343 KWYEKFDRTLKQDGYIVNNSDSCVYSKRSKTGYV-LICLYVDDMLIFGADMHDINQTKAFLSSKFEMKDLGEADVILGVKIKRTWNGISLCQSHYIEQMLKK-FDCFELNPVKTPYDPSI-LLKKNNHESVSQSE---YAKIIGSVMFLMNYTRPDIAYTVSRLSRYTHNPSKEH 511          
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Match: A0A4Y2FGZ5_ARAVE (Retrovirus-related Pol polyprotein from transposon RE2 n=5 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2FGZ5_ARAVE)

HSP 1 Score: 88.6 bits (218), Expect = 3.650e-18
Identity = 53/170 (31.18%), Postives = 94/170 (55.29%), Query Frame = 0
Query:    3 WYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFTTGDFTEIQRMRASLLEKYEGRDLGTLDKLIGVSITVDEDG-ITLDQQLYAESIVMAGMGTTEVQKTSTPLDPGMDFSAKQDHEEELDPTIHPYASILGKLIFLAGMTRPDLANSVRELGRRAASP 171
            W+ K+  ++I  G+  S+ D CL FK + +G    +  YVDD    G + +I+++   L E+YE ++LG ++  +G++I   ++G   L+Q+   E IV       E + T+ P+DP      KQ+ E+++ P    Y   +G L+++A ++RPD+A +V  L RR   P
Sbjct:   33 WHLKIGESLIKYGFEQSKADPCL-FKFANNGNPMYIIVYVDDLLIAGKYEDIRKIIKELEEEYELKNLGEVNYYLGINIERTKEGNFALNQKNKIEEIVEK-FNLKEAKPTNIPMDPNY---LKQEGEDDILPNNTQYRKAVGALLYIATVSRPDIAVAVNILSRRNEKP 197          
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 91.3 bits (225), Expect = 3.820e-18
Identity = 54/177 (30.51%), Postives = 94/177 (53.11%), Query Frame = 0
Query:    2 EWYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFTTGDFTE-IQRMRASLLEKYEGRDLGTLDKLIGVSITVDEDG--ITLDQQLYAESIVMAGMGTTEVQKTSTPLDPGMDFSAKQDHEEELDPTIHPYASILGKLIFLAGMTRPDLANSVRELGRRAASPCMRH 175
            EW  +    + S G++  + D C+ +K+  +GR+ I+T +VDD     +  E +   +  L   ++ +DLG   K+IG+ I  D +   I+L Q+ Y E  V+   G    +  STPLDP +    + D        +  Y S++G L++ A  TRPD++++V+ELG+ A++P   H
Sbjct: 1035 EWNREFDRKLTSIGFSKLEADHCV-YKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEG-VLTRFGMQNARPVSTPLDPNVILKKRTDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEH 1209          
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Match: A0A2R6RYG5_ACTCC (Endonuclease n=2 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RYG5_ACTCC)

HSP 1 Score: 90.5 bits (223), Expect = 7.070e-18
Identity = 53/176 (30.11%), Postives = 92/176 (52.27%), Query Frame = 0
Query:    2 EWYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFTTGDFTEIQRMRASLLE-KYEGRDLGTLDKLIGVSITVDEDGITLDQQLYAESIVMAGMGTTEVQKTSTPLDPGMDFSAKQ-DHEEELDPTIHPYASILGKLIFLAGMTRPDLANSVRELGRRAASPCMRH 175
            +W+ K  + ++S G+  ++ DKC+  K + +G + IL  Y+DD    G   ++ +    LL  K++ +D+G  D ++GV IT   DG+ L Q  Y + I +     ++     TP+D  +  S    + E +L+     Y+ I+G L++L   TRPD+A SV  L R  ++P   H
Sbjct:  994 QWHEKFDNVVLSSGFKINECDKCVYVKDTNEGYV-ILCLYIDDMIIVGSNDKVIKSTKDLLNSKFDMKDMGLADVILGVKITRTSDGLALSQTHYIDKI-LTKFNKSDTNVARTPIDVTLHLSKNGGEGESQLE-----YSRIIGSLMYLMSCTRPDIAYSVSRLSRYTSNPGSDH 1162          
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Match: UPI000900B90B (uncharacterized protein LOC109135209 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI000900B90B)

HSP 1 Score: 89.4 bits (220), Expect = 8.410e-18
Identity = 61/175 (34.86%), Postives = 90/175 (51.43%), Query Frame = 0
Query:    2 EWYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFTTG-DFTEIQRMRASLLEKYEGRDLGTLDKLIGVSITVDEDGITLDQQLYAESIVMAGMGTTEVQKTSTPLDPGMDFSAKQDHEEELDPTIHPYASILGKLIFLAGMTRPDLANSVRELGRRAASPCMRH 175
            +W+ KL S ++S+G+  S++D  L  KK E   I IL  YVDD   TG +   I  ++A L   +  +DLG L   +G+ +    DG  L Q  + + ++    G T  +KTSTPL   +        E EL      Y S++GKL FL  + RPDLA +V+ L +   SP + H
Sbjct:   30 QWFQKLNSALLSQGFLQSKNDYSLFIKK-ESADITILVVYVDDIIITGTNLATIDSLKAYLHTTFSIKDLGKLHYFLGIEVLTTSDGFILSQHKFTKELLQDS-GLTFQKKTSTPLPTHVKLLVD---EGELYHDPAAYRSLVGKLNFLTHI-RPDLAFAVQSLSQFMHSPKIAH 198          
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Match: A0A1Y1KL90_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1KL90_PHOPY)

HSP 1 Score: 89.0 bits (219), Expect = 2.210e-17
Identity = 51/165 (30.91%), Postives = 88/165 (53.33%), Query Frame = 0
Query:    3 WYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFT-TGDFTEIQRMRASLLEKYEGRDLGTLDKLIGVSITVDEDGITLDQQLYAESIVMAGMGTTEVQKTSTPLDPGMDFSAKQDHEEELDPTIHPYASILGKLIFLAGMTRPDLANSVRELGR 166
            W  K+   +I   +  S ++ CL  KK E+G + ++  YVDD F  T D  E   +   L   ++ ++LG   + +G+ I  DE+ IT+DQ+ Y  +I+       + +   TPL+ G+  S  +DH  ++     PY  ++G L+++A MTRPD+A +V  L +
Sbjct:  397 WNEKVDQVLIDIAYRKSDYEPCLYTKKRENGMLTVVALYVDDFFVFTNDSEEYNFLENQLSSHFKIKNLGEARQCLGIRIVRDENCITIDQESYIVAILKR-FNMLDCKSVCTPLENGIKLSKVKDHTCDVSL---PYKELIGSLMYVAVMTRPDIAFAVSLLSQ 557          
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Match: A0A1W7R6A5_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6A5_AEDAL)

HSP 1 Score: 89.0 bits (219), Expect = 2.350e-17
Identity = 54/174 (31.03%), Postives = 90/174 (51.72%), Query Frame = 0
Query:    3 WYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFTTGDFTEI-QRMRASLLEKYEGRDLGTLDKLIGVSITVDEDG-ITLDQQLYAESIVMAGMGTTEVQKTSTPLDPGMDFSAKQDHEEELDPTIHPYASILGKLIFLAGMTRPDLANSVRELGRRAASPCMR 174
            W ++L   ++ EG+     D CL ++K    ++  +  YVDD   + D   I   +  SL + +    LG + + +GV +  DE G   + QQ Y   +V +  G  + + ++ PLD G +   KQD +  + P  H Y  ++GKL+F+A  +RPD+A SV  LGR+ + P  R
Sbjct:  660 WNNRLHEVLVGEGFERCDSDPCL-YRKQVGDKLCFVLVYVDDLIVSSDDKAIVDSLEQSLKKNFAISCLGHVRQYLGVEVGQDEGGDYYISQQRYIADVVKSA-GLEDAKVSAIPLDTGYE---KQDQDPNVLPDNHEYQRLIGKLLFIAVNSRPDIAASVSILGRKTSKPTQR 828          
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Match: A0A4Y2FL03_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2FL03_ARAVE)

HSP 1 Score: 85.9 bits (211), Expect = 2.460e-17
Identity = 54/170 (31.76%), Postives = 92/170 (54.12%), Query Frame = 0
Query:    3 WYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFTTGDFTEIQRMRASLLEKYEGRDLGTLDKLIGVSIT-VDEDGITLDQQLYAESIVMAGMGTTEVQKTSTPLDPGMDFSAKQDHEEELDPTIHPYASILGKLIFLAGMTRPDLANSVRELGRRAASP 171
            W+ K+  ++I  G+  S+ D CL FK +++G    +  YVDD    G   +I++M   L E+YE ++LG ++   G++I    E+   L+Q+   + IV       E + T+ P+DP      KQ+ E++L P    Y   +G L+++A ++RPD+A +V  L RR   P
Sbjct:   52 WHLKIGESLIKYGFEQSKADPCL-FKFAKNGNPMYIIVYVDDLLIAGKEEDIRKMIKELEEEYELKNLGEVNYYSGINIERTKEENFALNQKNKIDEIVEK-FNLKEAKPTNIPMDPKY---LKQEGEDDLLPNNTQYRKAVGALLYIATVSRPDIAVAVNILSRRNEKP 216          
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Match: A0A7J7HUG0_CAMSI (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7HUG0_CAMSI)

HSP 1 Score: 88.6 bits (218), Expect = 3.230e-17
Identity = 53/175 (30.29%), Postives = 95/175 (54.29%), Query Frame = 0
Query:    2 EWYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFTTGDFTEIQRMRASLLE-KYEGRDLGTLDKLIGVSITVDEDGITLDQQLYAESIVMAGMGTTEVQKTSTPLDPGMDFSAKQDHEEELDPTIHPYASILGKLIFLAGMTRPDLANSVRELGRRAASPCMRH 175
            +W+ K  + ++S G+  ++ DKC+  K ++ G + IL  YVDD    G   E+ +    LL  K++ +D+G  D ++G+ IT    GI L Q  Y + I+    G+ +   +STP+D  + F+  ++++E +      Y+ ++G L++L   TRPD+A SV  + R   +P   H
Sbjct:  235 QWHEKFDNVMLSNGFRINECDKCIYVKDTDRGYV-ILCLYVDDMLIIGSNDEMIKTTKKLLNSKFDIKDMGIADVILGIKITRISGGIVLSQSHYVDKILEKFSGS-DTSVSSTPVDLSLHFT--KNNKESVSQL--EYSRVIGSLMYLMSCTRPDIAYSVSRVSRYTNNPDASH 403          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig994.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A9W6P7_LYGHE4.350e-1932.02Retrovirus-related Pol polyprotein from transposon... [more]
A0A5N6PGV2_9ASTR7.450e-1933.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y2FGZ5_ARAVE3.650e-1831.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A284QR88_ARMOS3.820e-1830.51Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A2R6RYG5_ACTCC7.070e-1830.11Endonuclease n=2 Tax=Actinidia chinensis var. chin... [more]
UPI000900B90B8.410e-1834.86uncharacterized protein LOC109135209 n=1 Tax=Beta ... [more]
A0A1Y1KL90_PHOPY2.210e-1730.91Integrase catalytic domain-containing protein (Fra... [more]
A0A1W7R6A5_AEDAL2.350e-1731.03Putative pol polyprotein (Fragment) n=1 Tax=Aedes ... [more]
A0A4Y2FL03_ARAVE2.460e-1731.76Retrovirus-related Pol polyprotein from transposon... [more]
A0A7J7HUG0_CAMSI3.230e-1730.29Beta-ketoacyl-[acyl-carrier-protein] synthase I n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..116
e-value: 2.0E-11
score: 43.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig994contigC-tenellus_contig994:13560..14087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig994.5.1mRNA_C-tenellus_contig994.5.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig994 13062..14537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig994.5.1 ID=prot_C-tenellus_contig994.5.1|Name=mRNA_C-tenellus_contig994.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=176bp
MEWYHKLRSTIISEGWTSSQHDKCLCFKKSEDGRIAILTTYVDDTFTTGD
FTEIQRMRASLLEKYEGRDLGTLDKLIGVSITVDEDGITLDQQLYAESIV
MAGMGTTEVQKTSTPLDPGMDFSAKQDHEEELDPTIHPYASILGKLIFLA
GMTRPDLANSVRELGRRAASPCMRH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2