prot_C-tenellus_contig9884.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9884.1.1
Unique Nameprot_C-tenellus_contig9884.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length189
Homology
BLAST of mRNA_C-tenellus_contig9884.1.1 vs. uniprot
Match: D8LCX6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX6_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 5.150e-99
Identity = 150/189 (79.37%), Postives = 164/189 (86.77%), Query Frame = 0
Query:    1 GGDSCRTPPERSMSVSMILPEGPVRKNRYQPPPTVHSYLKKMNEEVFSFHGDVNKQLARAMKGFSSSFARANRRKLLRKHFLAFDVNNTHRISREQFVQTVDEVAAEFFIDFDKRDKDLLAAFFFPKARKYSREHGRVEYETLLEIITVRDVRRARAFRQQVLNEGADYQELFTGVDHTARKRDFGGTL 189
            G    R+PP+R +S+SM+LPEGPVR++RYQPPPTVHSYL KMN E F +HGD NKQLARAMK FSSSFARANRRKLLRKHFLAFDVNNT RISR QFV+TV+EVA+EFFIDFD R+KDLLAAFFFPK      EHGRVEYETLLEIIT RDVRRARAFRQQ   EGAD+ ELFTGVD+TARKRDFGGTL
Sbjct:   87 GQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAEEFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPK------EHGRVEYETLLEIITARDVRRARAFRQQTAEEGADFDELFTGVDNTARKRDFGGTL 269          
BLAST of mRNA_C-tenellus_contig9884.1.1 vs. uniprot
Match: A0A6H5JLQ4_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ4_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 8.360e-82
Identity = 149/256 (58.20%), Postives = 163/256 (63.67%), Query Frame = 0
Query:    1 GGDSCRTPPERSMSVSMILPEGPVRKNRYQPPPTVHSYLKKMNEEV-------------------------------------------------------------------FSFHGDVNKQLARAMKGFSSSFARANRRKLLRKHFLAFDVNNTHRISREQFVQTVDEVAAEFFIDFDKRDKDLLAAFFFPKARKYSREHGRVEYETLLEIITVRDVRRARAFRQQVLNEGADYQELFTGVDHTARKRDFGGTL 189
            G    R+PP+R +S+SM+LPEGPVR++RYQPPPTVHSYL KMN E                                                                    F +HGD NKQLARAMK FSSSFARANRRKLLRKHFLAFDVNNT RISR QFV+TV+EVA+EFFIDFD R+KDLLAAFFFPK      EHGRVEYETLLEIIT RDVRRA AFRQQ   EGAD+ ELFTGVD+TARKRDFGGTL
Sbjct:  410 GQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAETXHRRRPKAIRRLFGCRTDPRFLCFVYKVVDRSFQGWGGATQETEXXXXXXXXXXXXRKESGDVRAREFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPK------EHGRVEYETLLEIITARDVRRAHAFRQQTAEEGADFDELFTGVDNTARKRDFGGTL 659          
BLAST of mRNA_C-tenellus_contig9884.1.1 vs. uniprot
Match: A0A7S3YGW2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGW2_HETAK)

HSP 1 Score: 122 bits (306), Expect = 8.060e-32
Identity = 72/159 (45.28%), Postives = 103/159 (64.78%), Query Frame = 0
Query:   34 TVHSYLKKMNEE--VFSFHGDVNKQLARAMKGFSSSFARANRRKLLRKHFLAFDVNNTHRISREQFVQTVDEVAAEFFIDFDKRDKDLLAAFFFPKARKYSREHGR-VEYETLLEIITVRDVRRARAFRQQVLNEGADYQELFTGVDHTARKRDFGGTL 189
            T+  +L+++N+   + +  G+  + +  AM  FSS+FAR  R+K+LRKHF+AFD   T ++ R+ F  ++DEVAAEFFIDFD+RDK +L  +FFP        HG  V+Y+ LL  I +RD RRA+A R QVL +    + LF   D  +R+RDFGGTL
Sbjct:   28 TLKHHLRQVNDRGRLAAERGE-RRTVVEAMCAFSSAFARMQRKKMLRKHFMAFDTRKTGKVGRKMFEHSIDEVAAEFFIDFDERDKGVLGDYFFPS-------HGSAVDYDQLLATICLRDFRRAQALRAQVLEDDDTREHLFIKND-LSRQRDFGGTL 177          
BLAST of mRNA_C-tenellus_contig9884.1.1 vs. uniprot
Match: A0A7S2CTV8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTV8_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.790e-22
Identity = 55/133 (41.35%), Postives = 88/133 (66.17%), Query Frame = 0
Query:   33 PTVHSYLKKMNEEVFSFHGDVNKQLARAMKGFSSSFARANRRKLLRKHFLAFDVNNTHRISREQFVQTVDEVAAEFFIDFDKRDKDLLAAFFFPKARKYSREHGRVEYETLLEIITVRDVRRARAFRQQVLNE 165
            PT+ +YLK++NE++ +  GD +KQL RAM+ FS SFAR +R+KLLRK+ +++D+ NT R+ +  F+++VD+  +E F++ D      LA+FFFP+          ++YE LLE+I  RD+ +A   R+  L E
Sbjct:  670 PTMRTYLKEVNEQLAACGGDESKQLERAMRAFSCSFARTHRKKLLRKNMISYDLGNTGRLDKVAFLRSVDKCVSEGFVELDVEQTQRLASFFFPQPTV-----NFLDYEVLLEVICSRDLGQAFEMREAALVE 797          
BLAST of mRNA_C-tenellus_contig9884.1.1 vs. uniprot
Match: F0YC17_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC17_AURAN)

HSP 1 Score: 87.4 bits (215), Expect = 1.240e-16
Identity = 58/171 (33.92%), Postives = 94/171 (54.97%), Query Frame = 0
Query:   14 SVSMILPE----GPVRKNRYQPP-------PTVHSYLKKMNEEVFSFHGDVNKQLARAMKGFSSSFARANRRKLLRKHFLAFDVNNTHRISREQFVQTVDEVAAEFFIDFDKRDKDLLAAFFFPKARKYSREHGRVEYETLLEIITVRDVRRARAFRQQVLNEGADYQELF 173
            ++ MILPE    G V  ++Y+         PTV +YL K+N  +    GDV K+L   ++ FSS+F R +R+K+LRKH +AFDV+NT    R++FV +V  +  + + + D R++ LL    FP    ++R+      +TLL ++  RDV+      Q  + +  D + LF
Sbjct: 1240 ALLMILPERGDIGAVDLDKYREHLTGGNKIPTVRNYLDKVNVTMRDCDGDVQKKLKNCLRAFSSAFGRNHRKKMLRKHLMAFDVSNTGTCHRDEFVGSVKRIIDDGYCELDTREQTLLFQHIFP--HPWTRQPT----DTLLTMLVSRDVKGVMRMHQAAMKQEEDPRFLF 1404          
BLAST of mRNA_C-tenellus_contig9884.1.1 vs. uniprot
Match: A0A7S1U9B2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9B2_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 5.060e-5
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   60 AMKGFSSSFARANRRKLLRKHFLAFDVNNTHRISREQFVQTVDEVAAEFFIDFDKRDKDLLAAFFFP 126
            +M  F+S FARA+R++ LRKH +A+DV+ T R+ R + V     VA E   D +    + + +FFFP
Sbjct:  428 SMTVFASLFARADRKRFLRKHLMAYDVDRTGRMKRSELVSAAQHVADECDFDLNFATLEPMLSFFFP 494          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9884.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LCX6_ECTSI5.150e-9979.37EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JLQ4_9PHAE8.360e-8258.20EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3YGW2_HETAK8.060e-3245.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2CTV8_9STRA2.790e-2241.35Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YC17_AURAN1.240e-1633.92Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1U9B2_9STRA5.060e-540.30Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 72..107
score: 9.269
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 59..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9884contigC-tenellus_contig9884:142..4683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9884.1.1mRNA_C-tenellus_contig9884.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9884 142..4683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9884.1.1 ID=prot_C-tenellus_contig9884.1.1|Name=mRNA_C-tenellus_contig9884.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=189bp
GGDSCRTPPERSMSVSMILPEGPVRKNRYQPPPTVHSYLKKMNEEVFSFH
GDVNKQLARAMKGFSSSFARANRRKLLRKHFLAFDVNNTHRISREQFVQT
VDEVAAEFFIDFDKRDKDLLAAFFFPKARKYSREHGRVEYETLLEIITVR
DVRRARAFRQQVLNEGADYQELFTGVDHTARKRDFGGTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair