prot_C-tenellus_contig987.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig987.1.1
Unique Nameprot_C-tenellus_contig987.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length527
Homology
BLAST of mRNA_C-tenellus_contig987.1.1 vs. uniprot
Match: D7G002_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G002_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 8.750e-45
Identity = 112/304 (36.84%), Postives = 167/304 (54.93%), Query Frame = 0
Query:   16 YNLTMLGTVLSILLAGGFIAVTMDSNMYEWEADQCTVKG-GQLQGGVNIIVDYDVDLTVSVGWQKFTVTYMDIGAAS---CFEDLEDGESYAVGDYQDNYAVATSLAMLVVFGVSVIVTLYTLFALTQARVSSRKVTGSLGIEGMGYLCALLSITSALSLAVYSWMIEGKFGERLEALAPRLMDVVQEAATTCSDVDTNFASSCPIAGWTYSAPLWGLSIAIVQVCVLMLTALLLIKEAWRIDGLLDGTIEPQV-EPVNVKHVVGVEFVVDKQSGSGTEKEPHNPLPRRSARTGVRSSGSGKSS 314
            Y++ M   + +I+L   FIA +M S  ++W  + C   G G + G    I+ YD+D+TV +GW++FTVT +D G  +   C E+L+ G++Y++GDYQDN A    L M+  + + V+V LYT  AL  AR   R+  G + ++ +   CAL ++    +  V+ W++EGKFG+R E+LAPRL   V+E A  CS+  T     C  A W+  AP W LS+ +  +        LL   A R+D L  G  E +V EP   K  VG   V++K   +   +E      RRSA+TGVR+ G   SS
Sbjct:   12 YHMAMFFLLSTIVLGAAFIATSMSSRFFKWSVEGCAAFGNGDVPGSSERIIVYDLDVTVDIGWREFTVTTLDQGTETIGECLEELKQGQTYSIGDYQDNNASLAGLGMVASWALGVLVALYTFVALLGARHGQRR--GGVSLKMLTKWCALFTVGLVTATTVFWWLVEGKFGKRQESLAPRLFQRVEEGAKLCSNSSTE--DQCNEATWSMDAPGWALSMGVTAMFAFGAATFLLWIIAPRVDHLNSGIEEIEVAEPA--KPPVG-NIVMEK---TPLPEEKTRGKDRRSAKTGVRAGGKAPSS 305          
BLAST of mRNA_C-tenellus_contig987.1.1 vs. uniprot
Match: A0A6H5KKN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN1_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.240e-43
Identity = 111/310 (35.81%), Postives = 172/310 (55.48%), Query Frame = 0
Query:   16 YNLTMLGTVLSILLAGGFIAVTMDSNMYEWEADQCTVKGG-QLQGGVNIIVDYDVDLTVSVGWQKFTVTYMDIGAAS---CFEDLEDGESYAVGDYQDNYAVATSLAMLVVFGVSVIVTLYTLFALTQARVSSRKVTGSLGIEGMGYLCALLSITSALSLAVYSWMIEGKFGERLEALAPRLMDVVQEAATTCSDVDTNFASSCPIAGWTYSAPLWGLSIAIVQVCVLMLTALLLIKEAWRIDGLLDGTIEPQV-EPVNVKHVVGVEFVVDKQSGSGTEKEPHNPLPRRSARTGVRSSGSGKSSSDENSD 320
            Y++ +   + +I+L   FIA +M S  ++W  + C+  G   + G  ++IVD+++D+TV +GW++FTVT +D G  +   C  +L+ G++Y++GDYQDN A    L M+  + + V+V LYT  AL  AR   R+  G + ++ +   CAL ++    +  V+ W+IEGKFG+R E+LAPRL   V+E A  CS+  T     C  A W+  AP W LS+ +  +        LL   A R+D L  G  E +V EP   K  VG   V++K   +   +E      RRSA+TGVR+ G   SS+ +  D
Sbjct:   12 YHMALFFLLSTIVLGAAFIATSMSSRFFKWSVEGCSAFGNVAIPGSSDLIVDFNLDMTVDIGWREFTVTSLDQGTETMGECLGELKQGQTYSIGDYQDNNASLAGLGMVASWALGVLVALYTFVALLGARHGQRR--GGVSLKMLTNWCALFTVGLVTATTVFWWLIEGKFGKRQESLAPRLFQRVEEGAELCSNGSTE--DQCNEATWSMDAPGWALSMGVTAMFAFGAATFLLWIIAPRVDHLNSGIEEIEVVEPA--KPPVG-NIVMEK---TPLPEEKTRGKDRRSAKTGVRAGGKAPSSTVQGGD 311          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig987.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G002_ECTSI8.750e-4536.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKN1_9PHAE1.240e-4335.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 354..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 472..526
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 407..430
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..430
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..526
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 248..526
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 178..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig987contigC-tenellus_contig987:4663..11220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig987.1.1mRNA_C-tenellus_contig987.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig987 4234..12930 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig987.1.1 ID=prot_C-tenellus_contig987.1.1|Name=mRNA_C-tenellus_contig987.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=527bp
MGGHHGGSAGVGSGFYNLTMLGTVLSILLAGGFIAVTMDSNMYEWEADQC
TVKGGQLQGGVNIIVDYDVDLTVSVGWQKFTVTYMDIGAASCFEDLEDGE
SYAVGDYQDNYAVATSLAMLVVFGVSVIVTLYTLFALTQARVSSRKVTGS
LGIEGMGYLCALLSITSALSLAVYSWMIEGKFGERLEALAPRLMDVVQEA
ATTCSDVDTNFASSCPIAGWTYSAPLWGLSIAIVQVCVLMLTALLLIKEA
WRIDGLLDGTIEPQVEPVNVKHVVGVEFVVDKQSGSGTEKEPHNPLPRRS
ARTGVRSSGSGKSSSDENSDERKERIAVPVSSASVAYVEPNREIDEAAYA
QASYEEEQRRSQAAYEEEQRYAEEQRYAEEQRYAEEQRYAEEQRRAEVAL
VEKNRAAQAAYEADQKRRSHHPHHQNMESEYAYEGHGETMSVMSEAMSRV
DHPVHGGTAGVVRSYSGASRMDESYRSGSESEDYMSDGQSTAFGMGSSQF
YSNGNGGRSFASMESQSEDGSYAPRS*
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