prot_C-tenellus_contig9869.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9869.3.1
Unique Nameprot_C-tenellus_contig9869.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length146
Homology
[Close]
BLAST of mRNA_C-tenellus_contig9869.3.1 vs. uniprot
Match: A0A6H5KV46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV46_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 9.630e-23
Identity = 48/92 (52.17%), Postives = 66/92 (71.74%), Query Frame = 0 
Query:   54 YLIAAAGIKAMTEHMQDIERGRNLKQRIASWADRAGLDLPSVEPALGFLDVLGVSRATVYKSLMESALQTLLDMIPQLDKEVLVALLLDSFR 145
            YL+  AG + +T ++QD+ +GR    R+  W + AGL  PSV+ ALGFLD+LGVSRA+VYK L+E +L+ LLD IP L + VL+ LL DSF+
Sbjct:   72 YLVGMAGHRTLTSYIQDLSKGRRWTDRVRGWGEEAGLAEPSVKLALGFLDILGVSRASVYKQLLEDSLRVLLDQIPHLPENVLLDLLTDSFK 163
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9869.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KV46_9PHAE9.630e-2352.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003892Ubiquitin system component CUEPFAMPF02845CUEcoord: 117..142
e-value: 1.2E-4
score: 21.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9869contigC-tenellus_contig9869:3689..5220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9869.3.1mRNA_C-tenellus_contig9869.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9869 3487..5435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9869.3.1 ID=prot_C-tenellus_contig9869.3.1|Name=mRNA_C-tenellus_contig9869.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=146bp
MTRSEANPRRGSRTRHMEQSDGLAGKNRSALSALPPESQTEETARVDSTS
GKTYLIAAAGIKAMTEHMQDIERGRNLKQRIASWADRAGLDLPSVEPALG
FLDVLGVSRATVYKSLMESALQTLLDMIPQLDKEVLVALLLDSFR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003892CUE