prot_C-tenellus_contig9854.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig9854.2.1
Unique Name	prot_C-tenellus_contig9854.2.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	178

Homology

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BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Match: A0A8K0DPC0_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0DPC0_9ROSA)

HSP 1 Score: 55.8 bits (133), Expect = 6.830e-6
Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 0

Query:   36 VMKNLCKNQKGKMFTEEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRLVISNALRYNSPD 112
            +++ L K     +F+E +D   +PDY     HPM F  V   +     SG TY +  +F +D+ L+ SNA++YNSPD
Sbjct:  212 ILERLQKKDTYGVFSEPVDPKELPDYHEIIEHPMDFGTVRKKV-----SGGTYANLEQFEKDVFLICSNAMQYNSPD 283

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BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Match: A0A8B8LGE1_ABRPR (uncharacterized protein LOC113864634 isoform X1 n=2 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8LGE1_ABRPR)

HSP 1 Score: 53.5 bits (127), Expect = 4.080e-5
Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 0

Query:   36 VMKNLCKNQKGKMFTEEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRLVISNALRYNSPD 112
            ++  L K     +F+E +D   +PDY     HPM F  V   L      G  Y +  +F +D+ L+ SNA++YNSPD
Sbjct:  128 ILDRLQKKDTHGVFSEPVDPEELPDYHDIIKHPMDFGTVRKKL-----DGAVYTNLEQFEKDVFLICSNAMQYNSPD 199

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BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Match: UPI0012639324 (uncharacterized protein LOC116112676 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI0012639324)

HSP 1 Score: 53.5 bits (127), Expect = 4.140e-5
Identity = 27/77 (35.06%), Postives = 42/77 (54.55%), Query Frame = 0

Query:   36 VMKNLCKNQKGKMFTEEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRLVISNALRYNSPD 112
            V+  L K     +F+E +D+  +PDY     HPM F  +   L      G +Y +  +F +D+ L+ SNA++YNSPD
Sbjct:  164 VLDRLQKKDTYGVFSEPVDSEELPDYHEIIAHPMDFATLRKKL-----DGGSYTNLEQFEKDVFLICSNAMQYNSPD 235

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BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Match: A0A067KY78_JATCU (Bromo domain-containing protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067KY78_JATCU)

HSP 1 Score: 53.5 bits (127), Expect = 4.150e-5
Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 0

Query:   36 VMKNLCKNQKGKMFTEEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRLVISNALRYNSPD 112
            ++  L K     +F+E +D   +PDY     HPM F  V   L      G  Y+   +F +D+ L+ SNA++YNSPD
Sbjct:  183 ILDRLQKKDTYAVFSEPVDPEELPDYHDIIEHPMDFSTVRKKL-----DGGVYVSLEQFEKDVFLICSNAMQYNSPD 254

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BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Match: A0A6P8D9U8_PUNGR (homeotic protein female sterile-like isoform X2 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A6P8D9U8_PUNGR)

HSP 1 Score: 53.1 bits (126), Expect = 4.980e-5
Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 0

Query:   36 VMKNLCKNQKGKMFTEEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRLVISNALRYNSPD 112
            ++  L K     +F+E +D   +PDY     HPM F  V   L D       Y +  +F +D+ L+ SNA++YNSPD
Sbjct:  177 ILDRLQKKDTHGVFSEPVDPEELPDYHDIIKHPMDFGTVRKKLEDG-----AYANLEQFEKDVFLICSNAMQYNSPD 248

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BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Match: A0A2I0JHT3_PUNGR (Bromo domain-containing protein n=3 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JHT3_PUNGR)

HSP 1 Score: 53.1 bits (126), Expect = 5.580e-5
Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 0

Query:   36 VMKNLCKNQKGKMFTEEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRLVISNALRYNSPD 112
            ++  L K     +F+E +D   +PDY     HPM F  V   L D       Y +  +F +D+ L+ SNA++YNSPD
Sbjct:  177 ILDRLQKKDTHGVFSEPVDPEELPDYHDIIKHPMDFGTVRKKLEDG-----AYANLEQFEKDVFLICSNAMQYNSPD 248

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BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Match: A0A2C9VVQ2_MANES (Bromo domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VVQ2_MANES)

HSP 1 Score: 53.1 bits (126), Expect = 5.610e-5
Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 0

Query:   36 VMKNLCKNQKGKMFTEEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRLVISNALRYNSPD 112
            ++  L K     +F+E +D   +PDY     HPM F  V   L      G  Y +  +F +D+ L+ SNA++YNSPD
Sbjct:  173 ILDRLQKKDTYGVFSEPVDPEELPDYHDIIEHPMDFSTVRKKL-----DGGAYANLEQFEKDVFLICSNAMQYNSPD 244

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BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Match: UPI000B8D0F8B (bromodomain-containing protein DDB_G0270170-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D0F8B)

HSP 1 Score: 53.1 bits (126), Expect = 5.630e-5
Identity = 28/77 (36.36%), Postives = 40/77 (51.95%), Query Frame = 0

Query:   36 VMKNLCKNQKGKMFTEEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRLVISNALRYNSPD 112
            V+  L K     +F+E +D   +PDY     HPM F  V   L   D     Y +  +F +D+ L+ SNA++YNSPD
Sbjct:  189 VLDRLQKKDTYGVFSEPVDPEELPDYHDIIAHPMDFGTVRKKLDGGD-----YANLEQFEKDVFLICSNAMQYNSPD 260

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BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Match: UPI001CC4AF85 (uncharacterized protein LOC122662232 isoform X1 n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC4AF85)

HSP 1 Score: 52.8 bits (125), Expect = 7.700e-5
Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 0

Query:   36 VMKNLCKNQKGKMFTEEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRLVISNALRYNSPD 112
            ++  L K     +F++ +D   +PDY     HPM F  V   L      G  Y +  +F +D+ L+ SNA+RYNSPD
Sbjct:  205 ILDRLQKKDTYGVFSDPVDPNELPDYHEIIEHPMDFGTVRKKL-----DGGAYANLEQFEKDVFLICSNAMRYNSPD 276

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BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Match: UPI00052265ED (ATPase family AAA domain-containing protein 2 n=1 Tax=Haliaeetus albicilla TaxID=8969 RepID=UPI00052265ED)

HSP 1 Score: 52.8 bits (125), Expect = 7.950e-5
Identity = 34/113 (30.09%), Postives = 54/113 (47.79%), Query Frame = 0

Query:    2 PCRLNFAERNRERKMREALVSELKLLNTTGHAKTVMKNLCKNQKGKMFTEEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRLVISNALRYNSPDDP 114
            P +L   E  R  +  E  + EL++       + V   L  +++ + FT+ +D   +PDY +   HPM    V A +         YL   +F++DI L+ +NAL YNS  DP
Sbjct:  758 PLQLTEEEIRRLEEQEEDTLLELRIF-----LRDVTDRLVVDRRFRAFTKPVDPEEVPDYEAVIKHPMDLSTVVAKI-----DLHQYLTARDFLKDINLICTNALEYNSAKDP 860

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig9854.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
A0A8K0DPC0_9ROSA	6.830e-6	36.36	Uncharacterized protein n=1 Tax=Rhamnella rubriner...	[more]
A0A8B8LGE1_ABRPR	4.080e-5	35.06	uncharacterized protein LOC113864634 isoform X1 n=...	[more]
UPI0012639324	4.140e-5	35.06	uncharacterized protein LOC116112676 n=1 Tax=Pista...	[more]
A0A067KY78_JATCU	4.150e-5	35.06	Bromo domain-containing protein n=2 Tax=Jatropha c...	[more]
A0A6P8D9U8_PUNGR	4.980e-5	35.06	homeotic protein female sterile-like isoform X2 n=...	[more]
A0A2I0JHT3_PUNGR	5.580e-5	35.06	Bromo domain-containing protein n=3 Tax=Punica gra...	[more]
A0A2C9VVQ2_MANES	5.610e-5	35.06	Bromo domain-containing protein n=1 Tax=Manihot es...	[more]
UPI000B8D0F8B	5.630e-5	36.36	bromodomain-containing protein DDB_G0270170-like n...	[more]
UPI001CC4AF85	7.700e-5	35.06	uncharacterized protein LOC122662232 isoform X1 n=...	[more]
UPI00052265ED	7.950e-5	30.09	ATPase family AAA domain-containing protein 2 n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001487	Bromodomain	SMART	SM00297	bromo_6	coord: 30..145 e-value: 0.0019 score: 17.4
IPR001487	Bromodomain	PFAM	PF00439	Bromodomain	coord: 34..113 e-value: 1.1E-13 score: 51.0
IPR001487	Bromodomain	PROSITE	PS50014	BROMODOMAIN_2	coord: 41..116 score: 11.395
IPR036427	Bromodomain-like superfamily	GENE3D	1.20.920.10		coord: 17..166 e-value: 5.7E-20 score: 73.1
IPR036427	Bromodomain-like superfamily	SUPERFAMILY	47370	Bromodomain	coord: 33..145
None	No IPR available	PANTHER	PTHR45926	OSJNBA0053K19.4 PROTEIN	coord: 26..166
None	No IPR available	PANTHER	PTHR45926:SF6	OSJNBA0053K19.4 PROTEIN	coord: 26..166
None	No IPR available	CDD	cd04369	Bromodomain	coord: 41..140 e-value: 2.29533E-12 score: 58.1526

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig9854	contig	C-tenellus_contig9854:1447..3320 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig9854.2.1	mRNA_C-tenellus_contig9854.2.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig9854 1447..3320 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig9854.2.1 ID=prot_C-tenellus_contig9854.2.1|Name=mRNA_C-tenellus_contig9854.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=178bp
RPCRLNFAERNRERKMREALVSELKLLNTTGHAKTVMKNLCKNQKGKMFT
EEIDTVMIPDYLSKCPHPMWFRKVEANLGDADDSGRTYLHHSEFIRDIRL
VISNALRYNSPDDPDNANDSYSVSYYSAAVYIEKEMEKMLAQTYTLNTLE
EVRRQEILSMLDEEKRMKDKEARQRIME

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001487	Bromodomain
IPR036427	Bromodomain-like_sf