prot_C-tenellus_contig9837.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9837.1.1
Unique Nameprot_C-tenellus_contig9837.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length229
Homology
[Close]
BLAST of mRNA_C-tenellus_contig9837.1.1 vs. uniprot
Match: D7G1G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G4_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.460e-14
Identity = 52/111 (46.85%), Postives = 58/111 (52.25%), Query Frame = 0 
Query:   88 PLEMTGVGLDIAKGDNLPEPHQDQSKQHLQRGKRLRRKRLAEKVVTHWKKFAHEGMASIRARRHAEVKLGGHALRRWHTHATALRHERHSLAAAHARWHVLAESRTLNTWL 198
            P+++ GVGL   +                 R +RLRRKRLAEKVV HWK FA EG+A  RAR HA        L RW   ATALR  RH   A   RW  LAESR   TWL
Sbjct:    8 PVQVEGVGLARRQQQGESAXXXXXXXXXXXRLRRLRRKRLAEKVVAHWKDFAREGIAEARARAHASAAPRRRGLTRWRAGATALRSTRHRRTADAGRWRFLAESRGFATWL 118
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9837.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1G4_ECTSI1.460e-1446.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9837contigC-tenellus_contig9837:26..1917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9837.1.1mRNA_C-tenellus_contig9837.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9837 26..2276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9837.1.1 ID=prot_C-tenellus_contig9837.1.1|Name=mRNA_C-tenellus_contig9837.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=229bp
MHPSSSCMGDAEIWRRRIRVADGLESGPYLDRIPDPAPREEKERDVAHQP
LMGDAIFAKLREPQEQLLPTPSIGNEMIVQRNVSFALPLEMTGVGLDIAK
GDNLPEPHQDQSKQHLQRGKRLRRKRLAEKVVTHWKKFAHEGMASIRARR
HAEVKLGGHALRRWHTHATALRHERHSLAAAHARWHVLAESRTLNTWLNF
VRHRIHAKQRQLTILNARRRRIPGQPGAA
back to top