prot_C-tenellus_contig9832.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9832.2.1
Unique Nameprot_C-tenellus_contig9832.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length142
Homology
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BLAST of mRNA_C-tenellus_contig9832.2.1 vs. uniprot
Match: D8LKP7_ECTSI (Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP7_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.370e-28
Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 0 
Query:    6 VPVYVVKRMEGMATDLVENYALLKVLDRRVASGALSQLWLSLAGPGQGDNLFRTLSAVVHKGVVRATAME----GVEDVGPGMARGVARGTPRWVAPVDPLTGETDTRLCFLYAEMWREIMDP 124
            VP ++++R++ ++  LVENYALL   DR +A   L QLWL+L+GPGQGDNL R L  VV KGV  A  ME    G+++ G      V     +WVAPVDP+TG  D RLCFLYA++WR +++P
Sbjct:  539 VPGHLMRRLQSLSLRLVENYALLSSKDRGLACQGLCQLWLALSGPGQGDNLSRMLGVVVQKGVSLAGTMENPGGGIDEAGEPSDAPV-----KWVAPVDPVTGAVDARLCFLYADLWRRVVNP 656
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BLAST of mRNA_C-tenellus_contig9832.2.1 vs. uniprot
Match: A0A6H5L056_9PHAE (NUC194 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L056_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 7.100e-24
Identity = 59/124 (47.58%), Postives = 79/124 (63.71%), Query Frame = 0 
Query:    6 VPVYVVKRMEGMATDLVENYALLKVLDRRVASGALSQLWLSLAGPGQGDNLFRTLSAVVHKGVVRATAME----GVEDVGPGMARGVARGTP-RWVAPVDPLTGETDTRLCFLYAEMWREIMDP 124
            VP ++++R++ ++  LVENYALL   DR +A   L QLWL+ +GPGQGDNL R       KGV  A  ME    GV++ G          TP +WVAPVDP+TG  D RLCFLYA++WR +++P
Sbjct:  134 VPGHLMRRLQSLSLRLVENYALLGNKDRGLACQGLCQLWLAFSGPGQGDNLSRM------KGVSLAGTMENPGGGVDEAGE------PSDTPVKWVAPVDPVTGAVDARLCFLYADLWRRVVNP 245
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9832.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKP7_ECTSI1.370e-2849.59Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5L056_9PHAE7.100e-2447.58NUC194 domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9832contigC-tenellus_contig9832:4208..5630 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9832.2.1mRNA_C-tenellus_contig9832.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9832 4208..5630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9832.2.1 ID=prot_C-tenellus_contig9832.2.1|Name=mRNA_C-tenellus_contig9832.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=142bp
GGGQGVPVYVVKRMEGMATDLVENYALLKVLDRRVASGALSQLWLSLAGP
GQGDNLFRTLSAVVHKGVVRATAMEGVEDVGPGMARGVARGTPRWVAPVD
PLTGETDTRLCFLYAEMWREIMDPPEEENGHQQELFGNHHRY
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