prot_C-tenellus_contig98.10.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig98.10.1
Unique Nameprot_C-tenellus_contig98.10.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length323
Homology
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)

HSP 1 Score: 407 bits (1045), Expect = 8.240e-126
Identity = 205/313 (65.50%), Postives = 255/313 (81.47%), Query Frame = 0
Query:    9 APLQLPAVLHASMAPLLFVQRINVGTLVVRATVLGHIPGKQVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTIGGGSGVMRPIAGTMSLVHRTSQSLIASTGVNSEWQHATPAAAANPVLCHLNTDLWYRWSLLPPDHDFLYQTQAMCSHASYSRADIPVMIILSNKSIFLYRGASGCEKLWMQIEHSDITLVEQGAEHVPAELILNTRAVRRPRHQFTGISAVAV 321
            +P  LP  L A++ P LF+QR+++G LVVRATV G+IPGKQVF+ALDKS LL +PVSLRGV ARP+ IAE I SNYA DA+L+SLAVVGSL+A+GSPT LL+EWG+GVYDLF++PI+A+PQGP +T RA++ G+SSL+RH SAG LSSVSG++  LSR +GG  GV+RPIAGTM LV+RTS+SLIASTGV+SEW HA    AANP   +LN DLWYR  LLP  H+FLY+T A+CS+ASYS+A++PV I+LS+K++FLYRG SGCE LW QI+H DITLVEQ AEH PAELILN R  RRP+   + ++A  V
Sbjct: 4315 SPQLLPPALGANVVPRLFIQRVDIGALVVRATVQGYIPGKQVFLALDKSPLLFRPVSLRGVLARPDEIAEQIASNYAVDALLRSLAVVGSLEALGSPTTLLSEWGKGVYDLFAMPIKAMPQGPSSTFRATFRGVSSLLRHASAGTLSSVSGVSNALSRNLGGRGGVVRPIAGTMGLVYRTSKSLIASTGVDSEWTHAEANTAANPATAYLNADLWYRCCLLPAGHEFLYRTPALCSNASYSQANVPVTIVLSSKAVFLYRGGSGCETLWKQIDHQDITLVEQSAEHAPAELILNARGYRRPKSATSPLAAARV 4627          
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A7S1G5R3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5R3_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.760e-13
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 0
Query:   51 FVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQ-----GPFATLRASYL-GLSSLVRHGSAGALSSVSGLTATLSRTI 168
            F+++D++ L L  VSL  V A PE +A  + +NY ADA+L+S A+VGSL+ +G+PT  +   G G+ DLF+LP+ A+       G  A +   +  G  SL  H + GALSSV+G +A LSR +
Sbjct:   37 FLSVDEAPLALASVSLDCVRATPERLARELLANYIADAILRSPALVGSLELLGNPTRFMRGLGSGLRDLFALPMLAIRDREKGVGSGAGILTGFARGWGSLAAHVAEGALSSVAGFSAALSRNL 160          
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: W7TJC5_9STRA (VPS13_C domain-containing protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJC5_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.000e-13
Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 0
Query:   14 PAVLHAS-MAPLLFVQRINVGTLVVRATVLGHIPGKQVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 168
            PAVL  +   P  F Q +    L V       +PG +VF+ LD S L  + V L  VF+ P+A  + I SNY ADA+ +S A++GSL+ IGSP IL++    G+ DL  L           +L  +  GL SL RH   G L+S++G ++++ R +
Sbjct: 3437 PAVLTENDQTPCTFFQSVTFSPLSVLLDARVFVPGSRVFLGLDGSPLFFEGVRLTDVFSTPQAFLKGILSNYVADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVMLSASG-------SLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNL 3585          
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A4D9D6P0_9STRA (VPS13_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6P0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.460e-12
Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 0
Query:   14 PAVLHAS-MAPLLFVQRINVGTLVVRATVLGHIPGKQVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 168
            PAVL  +   P  F Q +    L V       +PG +VF+ LD S L  + V L  VF+ P+A  + I SNY ADA+ +S A++GSL+ IGSP IL++    G+ DL  L           +L  +  GL SL RH   G L+S++G ++++ R +
Sbjct:  985 PAVLTENDPTPSTFFQSVTFSPLSVLLDARVFVPGSRVFLGLDGSPLFFEGVRLTDVFSTPQAFLKGILSNYVADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVLLSASG-------SLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNL 1133          
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A6P8J9P6_ACTTE (vacuolar protein sorting-associated protein 13B-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8J9P6_ACTTE)

HSP 1 Score: 75.1 bits (183), Expect = 4.040e-11
Identity = 44/120 (36.67%), Postives = 71/120 (59.17%), Query Frame = 0
Query:   49 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 168
            ++F+ +D + L L    +  V+A   A A+ +  +Y +  M +   VVGSL+ +G+P  L+  + +G+ D F LP   L +GP A +     G+SSLVRH SAGAL+SV+ L + +SR +
Sbjct: 2886 KLFIGMDDTSLSLGHFHMSPVYAPTSAFAQKVLFHYMSSVMFKIGWVVGSLELLGNPAGLIRNFSQGLSDFFFLPYDGLTRGPGAFVSGMSQGVSSLVRHVSAGALTSVTNLASGISRNL 3005          
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: UPI000719AC75 (vacuolar protein sorting-associated protein 13B-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719AC75)

HSP 1 Score: 70.9 bits (172), Expect = 1.010e-9
Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 0
Query:   49 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 168
            ++F+A D + L       R +   P  +A  +  +YAA A L++  VVGSL  +GSPT +L E   G+ DLF +P      GP + +     G +SL+RH SAGA++SV+    ++SR +
Sbjct: 3697 KLFLASDSTPLSFGAFERRDLCTTPWCLANALLRHYAAGAALRAGWVVGSLDLLGSPTSMLREVTSGMADLFRMPYEGATHGPGSFIAGMSRGAASLLRHTSAGAITSVTNFALSVSRNM 3816          
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A7SZF7_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SZF7_NEMVE)

HSP 1 Score: 69.3 bits (168), Expect = 2.940e-9
Identity = 41/120 (34.17%), Postives = 69/120 (57.50%), Query Frame = 0
Query:   49 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 168
            ++F+A+D + L    + L  V+ +  A+A+ IF +Y + A+ +   V+GSL+ +GSP  L+  + +G+ D F LP   L +GP A +           RH SAGAL+SV+ L  ++SR +
Sbjct: 1105 KLFIAMDDTPLYFGELQLSPVYTQSSALAQKIFYHYLSAAVFKVGWVLGSLELLGSPAGLIRNFTQGLSDFFYLPYDGLTRGPGAFVSGMXXXXXXXXRHFSAGALTSVTNLATSISRNL 1224          
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A6P4ZTE8_BRABE (vacuolar protein sorting-associated protein 13B-like n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZTE8_BRABE)

HSP 1 Score: 69.3 bits (168), Expect = 3.230e-9
Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 0
Query:   49 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 168
            +VF++ D +RL  +  S   VF     + + +  +Y + A+ ++  V+GSL  +GSP  LL     G+ D F LP   L +GP A +     G SSLVRH SAG L+S+  L  ++SR +
Sbjct: 3549 KVFISSDHTRLTFKHFSRTPVFTVSRNLVQDLALHYGSGALFRAGWVLGSLDILGSPASLLGSISSGISDFFRLPYEGLTRGPGAFVSGVTKGASSLVRHVSAGTLTSIVNLANSISRNM 3668          
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: C3ZQS8_BRAFL (Uncharacterized protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZQS8_BRAFL)

HSP 1 Score: 69.3 bits (168), Expect = 3.250e-9
Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 0
Query:   49 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 168
            +VF++ D +RL  +  S   VF     + + +  +Y + A+ ++  V+GSL  +GSP  LL     G+ D F LP   L +GP A +     G SSLVRH SAG L+S+  L  ++SR +
Sbjct: 3880 KVFISSDHTRLTFKNFSRTPVFTVSRNLVQDLALHYGSGALFRAGWVLGSLDILGSPASLLGSISSGISDFFRLPYEGLTRGPGAFVSGVTKGASSLVRHVSAGTLTSIVNLANSISRNM 3999          
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Match: A0A7M7N2I3_STRPU (Uncharacterized protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7N2I3_STRPU)

HSP 1 Score: 68.6 bits (166), Expect = 5.790e-9
Identity = 39/120 (32.50%), Postives = 68/120 (56.67%), Query Frame = 0
Query:   49 QVFVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQAIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGSAGALSSVSGLTATLSRTI 168
            ++F++LD++RL  Q      ++A    + + +  +Y + A+ ++   +GSL  IG+P   L     G+YD   LP   L +GP A +     G+SSLVRH SAG L+S++   +++SR +
Sbjct: 3650 KMFLSLDQTRLQFQRYETGPIYATHRQLGQALTLHYTSGALFKAGWAIGSLDLIGNPAGFLRSARTGLYDTMYLPYEGLTRGPSAFVSGVASGMSSLVRHLSAGTLTSITKFASSMSRNL 3769          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig98.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKG1_9PHAE8.240e-12665.50VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S1G5R3_9STRA3.760e-1341.94Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
W7TJC5_9STRA5.000e-1336.54VPS13_C domain-containing protein n=3 Tax=Nannochl... [more]
A0A4D9D6P0_9STRA1.460e-1236.54VPS13_C domain-containing protein n=1 Tax=Nannochl... [more]
A0A6P8J9P6_ACTTE4.040e-1136.67vacuolar protein sorting-associated protein 13B-li... [more]
UPI000719AC751.010e-935.83vacuolar protein sorting-associated protein 13B-li... [more]
A7SZF7_NEMVE2.940e-934.17Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A6P4ZTE8_BRABE3.230e-935.83vacuolar protein sorting-associated protein 13B-li... [more]
C3ZQS8_BRAFL3.250e-935.83Uncharacterized protein n=2 Tax=Branchiostoma flor... [more]
A0A7M7N2I3_STRPU5.790e-932.50Uncharacterized protein n=2 Tax=Strongylocentrotus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 51..168
e-value: 2.8E-16
score: 59.8
IPR039782Vacuolar protein sorting-associated protein 13BPANTHERPTHR12517VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Bcoord: 48..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig98contigC-tenellus_contig98:22330..27100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig98.10.1mRNA_C-tenellus_contig98.10.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig98 22330..27100 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig98.10.1 ID=prot_C-tenellus_contig98.10.1|Name=mRNA_C-tenellus_contig98.10.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=323bp
MDLEVIRLAPLQLPAVLHASMAPLLFVQRINVGTLVVRATVLGHIPGKQV
FVALDKSRLLLQPVSLRGVFARPEAIAEWIFSNYAADAMLQSLAVVGSLQ
AIGSPTILLTEWGRGVYDLFSLPIRALPQGPFATLRASYLGLSSLVRHGS
AGALSSVSGLTATLSRTIGGGSGVMRPIAGTMSLVHRTSQSLIASTGVNS
EWQHATPAAAANPVLCHLNTDLWYRWSLLPPDHDFLYQTQAMCSHASYSR
ADIPVMIILSNKSIFLYRGASGCEKLWMQIEHSDITLVEQGAEHVPAELI
LNTRAVRRPRHQFTGISAVAVTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031645VPS13_C
IPR039782VPS13B