prot_C-tenellus_contig9779.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9779.4.1
Unique Nameprot_C-tenellus_contig9779.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length37
Homology
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BLAST of mRNA_C-tenellus_contig9779.4.1 vs. uniprot
Match: D8LU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU92_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 3.070e-9
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0 
Query:    1 VNEILERYVPNSWSKPMPDAEPNQREQWIWAKYEQR 36
            VNEI ERYVP+SW+KP PDA+  QREQW+ AKY+ R
Sbjct:   71 VNEIYERYVPSSWTKPTPDADQQQREQWVLAKYKHR 106
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9779.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU92_ECTSI3.070e-969.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038508ArfGAP domain superfamilyGENE3D1.10.220.150Arf GTPase activating proteincoord: 1..36
e-value: 1.6E-5
score: 26.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9779contigC-tenellus_contig9779:5575..5685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9779.4.1mRNA_C-tenellus_contig9779.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9779 5575..5685 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9779.4.1 ID=prot_C-tenellus_contig9779.4.1|Name=mRNA_C-tenellus_contig9779.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=37bp
VNEILERYVPNSWSKPMPDAEPNQREQWIWAKYEQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038508ArfGAP_dom_sf