prot_C-tenellus_contig9770.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9770.1.2
Unique Nameprot_C-tenellus_contig9770.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length177
Homology
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Match: D8LE99_ECTSI (ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE99_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 4.440e-35
Identity = 63/83 (75.90%), Postives = 73/83 (87.95%), Query Frame = 0
Query:   94 ESSSRPEDKYKVVLFNDNGNTREYVSRSLVQVVGMPEEQAFAIMQQAHKNGMATVGIWHQEMADAYSSSLKQRGLVSDITPVD 176
            E+S RPEDKYKV+LFNDNGNTREYVSRSLVQVVG+ E  AF IMQQA+ NGMA VGIWHQEMADAYS+SLK+RGL+++  P +
Sbjct:   70 ETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152          
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Match: A0A835ZJP8_9STRA (ATP-dependent Clp protease adaptor protein ClpS-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJP8_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.730e-30
Identity = 62/100 (62.00%), Postives = 74/100 (74.00%), Query Frame = 0
Query:   78 GSSVLPREKKLIK-NRQESSSRPEDKYKVVLFNDNGNTREYVSRSLVQVVGMPEEQAFAIMQQAHKNGMATVGIWHQEMADAYSSSLKQRGLVSDITPVD 176
            G++VL R   LI+    E    P DK+KV+LFNDNGNTREYV+RSLVQV+GM E  A+ IM  AHKNGMA VGIW+ E A+AYS  LK RGLVS+I PV+
Sbjct:   34 GAAVLERPAPLIQPGTAEDQPSPADKFKVMLFNDNGNTREYVARSLVQVIGMTESDAYDIMTMAHKNGMALVGIWNLERAEAYSDQLKTRGLVSEIFPVE 133          
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Match: A0A7S4DBT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBT8_HETAK)

HSP 1 Score: 99.0 bits (245), Expect = 4.500e-23
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 0
Query:   86 KKLIKNRQESSSRPEDKYKVVLFNDNGNTREYVSRSLVQVVGMPEEQAFAIMQQAHKNGMATVGIWHQEMADAYSSSLKQRGLVSDI 172
            KK I  + ES +    KY V+LFND  N REYV+R LV+VVGMPE+QAFAIM +AH+NGM  VG WH+E+A+AY  +L  R L  DI
Sbjct:   73 KKNIDRKAESEAETGGKYTVLLFNDPMNYREYVARCLVEVVGMPEDQAFAIMGEAHRNGMGVVGSWHEELAEAYKEALLARSLTVDI 159          
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Match: A0A7S2V4Q9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q9_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.710e-18
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 0
Query:  103 YKVVLFNDNGNTREYVSRSLVQVVGMPEEQAFAIMQQAHKNGMATVGIWHQEMADAYSSSLKQRGLVSDI 172
            Y+++LFNDN NTREYV+R L  +VG+ E +AF IM +AHKNGMA VG W  E+A+AY+ SL + GL S +
Sbjct:   86 YQILLFNDNMNTREYVARCLCTIVGLSEGKAFEIMLEAHKNGMAVVGSWRYELAEAYNESLNRHGLASTL 155          
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Match: A0A7S2VY96_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VY96_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.550e-17
Identity = 46/100 (46.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   77 TGSSVLPREKKLIKNRQESSSRPEDKYKVVLFNDNGNTREYVSRSLVQVVGMPEEQAFAIMQQAHKNGMATVGIWHQEMADAYSSSLKQRGLVSDITPVD 176
            TG  V   EKK +K+R+ + S   D ++V ++ND  NTRE+VSR LVQ+VG+ E  A+  M QAHKNG+A VG +  E A+ Y  +L + G++ D+ PVD
Sbjct:   86 TGGGVGLVEKKAMKDRERTGS---DAWEVRIYNDVKNTREFVSRCLVQIVGLSETFAYQTMMQAHKNGLAAVGTYAFERAEMYHEALTENGIMCDMIPVD 182          
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Match: A0A0M0LSS8_9EUKA (ATP-dependent clp protease adaptor protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LSS8_9EUKA)

HSP 1 Score: 83.6 bits (205), Expect = 3.630e-17
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0
Query:  102 KYKVVLFNDNGNTREYVSRSLVQVV-GMPEEQAFAIMQQAHKNGMATVGIWHQEMADAYSSSLKQRGLVSDITPVD 176
            KYKV+LFNDN N REYV+R LV  + GM +  A+ +MQ+AHK GMA VG+W  E+A+AY   LK  GL++ +T  D
Sbjct:   82 KYKVLLFNDNVNRREYVARILVGAIPGMSQADAYLVMQKAHKQGMAVVGVWVFEVAEAYCDKLKSGGLIASVTEED 157          
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Match: B5Y4P7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y4P7_PHATC)

HSP 1 Score: 82.0 bits (201), Expect = 1.560e-16
Identity = 63/175 (36.00%), Postives = 89/175 (50.86%), Query Frame = 0
Query:    5 FRLVALLLVTISSSRAFSPSMLRVSGVARHHAPGTRIFSSVTKSDCPVRDSVTWIAPLMGLDIAIPRERLPPTGSSVL--PREKKLIKNR-QESSSRPEDKYKVVLFNDNGNTREYVSRSLVQVVGMPEEQAFAIMQQAHKNGMATVGIWHQEMADAYSSSLKQRGLVSDITPVD 176
            F LV L L+  S +  F+PS            P     SSV++S    R S   I           RE +     +VL  P EK  +    +E      + ++V ++ND  NTRE+V+RSLVQV GM E +A+  M QAH+NG+A VG W  E+A+ Y  +L+  G+V DI PV+
Sbjct:    6 FLLVVLALLGSSVTAFFAPSR-----------PKASFGSSVSRSTVAARMSPATIE----------RESVKVGAPAVLDRPAEKTRVDEPVKERKGMGHEAWEVRIYNDGLNTREHVARSLVQVTGMSEMEAYQTMMQAHQNGIAVVGRWVYEVAEMYHDALQNNGIVCDIVPVE 159          
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Match: A0A7S1GM15_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GM15_CYCTE)

HSP 1 Score: 80.5 bits (197), Expect = 8.210e-16
Identity = 36/83 (43.37%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   92 RQESSSRPEDKYKVVLFNDNGNTREYVSRSLVQVVGMPEEQAFAIMQQAHKNGMATVGIWHQEMADAYSSSLKQRGLVSDITP 174
            +++   R  ++++V ++ND  NTRE+V+RSLVQ+ G+ E  A+  M QAH+NGMA VG W  E+A+ Y   LK  G++ D+ P
Sbjct:   87 KKQGKHRGNEQWEVRIYNDRMNTREHVARSLVQITGLSESNAYNTMMQAHQNGMAVVGQWAYEIAELYHDRLKGEGIICDLVP 169          
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Match: A0A7S4HUU8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HUU8_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 1.150e-15
Identity = 40/85 (47.06%), Postives = 58/85 (68.24%), Query Frame = 0
Query:   93 QESSSRPEDKYKVVLFNDNGNTREYVSRSLVQVV-GMPEEQAFAIMQQAHKNGMATVGIWHQEMADAYSSSLKQRGLVSDITPVD 176
            Q+ + +   K+K++LFNDN N REYV+R LV  V    +  A+ +MQ+AH+NGMA VG+W  E+A+AY   LKQ GL++ +T  D
Sbjct:   74 QQKAPQKGKKWKLLLFNDNVNKREYVARVLVSSVPDFSQADAYKVMQKAHQNGMAVVGVWVFEVAEAYCDKLKQGGLIASVTEED 158          
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Match: A0A7S2HHZ7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HHZ7_9EUKA)

HSP 1 Score: 79.3 bits (194), Expect = 1.510e-15
Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 0
Query:   90 KNRQESSSRPEDKYKVVLFNDNGNTREYVSRSLVQVV-GMPEEQAFAIMQQAHKNGMATVGIWHQEMADAYSSSLKQRGLVS 170
            K +Q+ ++    K+KV+LFNDN N REYV+R LV  V GM +  A+ +MQ+AHK GMA VGIW  EMA+AY   LK  G +S
Sbjct:   67 KPKQDGANEKAKKWKVLLFNDNVNRREYVARVLVGAVPGMTQADAYLVMQKAHKQGMAVVGIWVFEMAEAYCDQLKSGGGLS 148          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9770.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE99_ECTSI4.440e-3575.90ATP-dependent Clp protease adaptor protein ClpS n=... [more]
A0A835ZJP8_9STRA1.730e-3062.00ATP-dependent Clp protease adaptor protein ClpS-do... [more]
A0A7S4DBT8_HETAK4.500e-2357.47Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V4Q9_9STRA1.710e-1857.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2VY96_9STRA2.550e-1746.00Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A0M0LSS8_9EUKA3.630e-1753.95ATP-dependent clp protease adaptor protein n=1 Tax... [more]
B5Y4P7_PHATC1.560e-1636.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1GM15_CYCTE8.210e-1643.37Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4HUU8_9EUKA1.150e-1547.06Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S2HHZ7_9EUKA1.510e-1552.44Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 82..171
e-value: 9.3E-21
score: 75.4
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 98..172
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 99..165
e-value: 5.7E-17
score: 61.3
IPR022935ATP-dependent Clp protease adaptor protein ClpSPANTHERPTHR33473ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 91..174
NoneNo IPR availablePANTHERPTHR33473:SF1ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 91..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9770contigC-tenellus_contig9770:886..2261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9770.1.2mRNA_C-tenellus_contig9770.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig9770 731..3451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9770.1.2 ID=prot_C-tenellus_contig9770.1.2|Name=mRNA_C-tenellus_contig9770.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=177bp
MSATFRLVALLLVTISSSRAFSPSMLRVSGVARHHAPGTRIFSSVTKSDC
PVRDSVTWIAPLMGLDIAIPRERLPPTGSSVLPREKKLIKNRQESSSRPE
DKYKVVLFNDNGNTREYVSRSLVQVVGMPEEQAFAIMQQAHKNGMATVGI
WHQEMADAYSSSLKQRGLVSDITPVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR003769ClpS_core
IPR022935ClpS