prot_C-tenellus_contig9767.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9767.1.1
Unique Nameprot_C-tenellus_contig9767.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length152
Homology
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A835Z819_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z819_9STRA)

HSP 1 Score: 235 bits (600), Expect = 4.510e-69
Identity = 123/156 (78.85%), Postives = 135/156 (86.54%), Query Frame = 0
Query:    1 VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNV-----GDGVKSE---EELQEVFAVVFDEFHYMNDRDRGTV 148
            VR ELF ALFPFDLDGFQ EAL AL  RKNVIVSAPTGSGKTVAGELAIYYALAL LRVFYTTPLKALSNQK++DF+++FG ERVGLLTGDSS+NREAQV VMTTEVFRNMLYD+      G+G  +    +EL++VFAVVFDEFHYMNDRDRGTV
Sbjct:  110 VRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTV 265          
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A6H5L357_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L357_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.050e-63
Identity = 109/148 (73.65%), Postives = 122/148 (82.43%), Query Frame = 0
Query:    1 VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 148
            V+PELFQALFPF+LD FQTEAL  LA R NVIVSAPTGSGKTV GELA+         VFYTTPLKALSNQK+ DF++QFG ++VGLLTGDSSFNR+AQV+VMTTEVFRNMLYD+   G     +L +VFAVVFDEFHYMNDRDRGTV
Sbjct:   35 VQPELFQALFPFELDPFQTEALRGLAGRNNVIVSAPTGSGKTVVGELAV---------VFYTTPLKALSNQKFQDFRRQFGEDKVGLLTGDSSFNRDAQVAVMTTEVFRNMLYDSEETG-----DLDDVFAVVFDEFHYMNDRDRGTV 168          
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A7S4DB23_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB23_HETAK)

HSP 1 Score: 198 bits (503), Expect = 1.050e-62
Identity = 104/134 (77.61%), Postives = 111/134 (82.84%), Query Frame = 0
Query:   15 DGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 148
            DGFQ EAL AL  RKN IVSAPTGSGKTVAGELAIYYALAL LRVFYT+PLKALSNQKY DF++QFG ER GLLTGD+S NR AQV VMTTEVFRNMLY+        EE+L +VFAVVFDEFHYMND  RGTV
Sbjct:    1 DGFQLEALTALGQRKNAIVSAPTGSGKTVAGELAIYYALALGLRVFYTSPLKALSNQKYQDFRRQFGAERAGLLTGDTSINRGAQVCVMTTEVFRNMLYE--------EEDLLDVFAVVFDEFHYMNDPSRGTV 126          
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A4D9D0G8_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0G8_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.810e-60
Identity = 109/148 (73.65%), Postives = 125/148 (84.46%), Query Frame = 0
Query:    1 VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 148
            V+ E F+A+FPF LD FQ  AL AL  R+NV+VSAPTGSGKTVAGELAIYYALAL+LRV+YTTPLKALSNQK+ADF +QFGPERVGLLTGD++ NR AQV++MTTEV+RNMLY   GD      EL +VFAVVFDEFHYMND +RGTV
Sbjct:  157 VKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGKTVAGELAIYYALALDLRVYYTTPLKALSNQKFADFCRQFGPERVGLLTGDTNINRGAQVTIMTTEVYRNMLY--TGDAG----ELDQVFAVVFDEFHYMNDPERGTV 298          
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: D7G373_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G373_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 4.540e-60
Identity = 110/148 (74.32%), Postives = 122/148 (82.43%), Query Frame = 0
Query:    1 VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 148
            V+PELFQALFPF+LD FQTEAL  LA R NVIVSAPTGSGKTV GELA+         VFYTTPLKALSNQK+ DF++QFG ++VGLLTGDSSFNR+AQV+VMTTEVFRNMLYD+   G     EL +VFAVVFDEFHYMNDRDRGTV
Sbjct:  377 VQPELFQALFPFELDPFQTEALRGLAGRNNVIVSAPTGSGKTVVGELAV---------VFYTTPLKALSNQKFQDFRRQFGEDKVGLLTGDSSFNRDAQVAVMTTEVFRNMLYDSEETG-----ELDDVFAVVFDEFHYMNDRDRGTV 510          
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A7S2DG78_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DG78_9STRA)

HSP 1 Score: 198 bits (504), Expect = 4.590e-56
Identity = 103/145 (71.03%), Postives = 117/145 (80.69%), Query Frame = 0
Query:    4 ELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 148
            ELF+ALF FDLD FQ EAL AL  R++V+VSAPTGSGKTVAGELAI+YALAL L+V YTTPLKALSNQK+ DF++Q+G  RVGLLTGDS  NREA V VMTTEVFRNMLYD++         +Q+VFAVV DE HYMND  RGTV
Sbjct:  134 ELFRALFSFDLDSFQLEALQALGTRRSVVVSAPTGSGKTVAGELAIWYALALGLKVMYTTPLKALSNQKFRDFRRQYGAHRVGLLTGDSGVNREAPVLVMTTEVFRNMLYDDLNM-------VQDVFAVVLDELHYMNDPSRGTV 271          
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A7S0QGM8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QGM8_9CRYP)

HSP 1 Score: 178 bits (452), Expect = 2.000e-53
Identity = 94/149 (63.09%), Postives = 111/149 (74.50%), Query Frame = 0
Query:    1 VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNRE-AQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 148
            ++ E  Q  FP+ LD FQ +A+ +L  +K+VIVSAPTGSGKTV GE A+Y  LAL  +V YTTPLKALSNQKY+DF KQFG ERVGLLTGD S NRE A V V+TTEV+RNMLYD      K    + +V +V+ DEFHYMNDRDRGTV
Sbjct:   22 IQVETIQRCFPYPLDTFQIDAVRSLVEKKSVIVSAPTGSGKTVCGEAAVYLGLALGKKVLYTTPLKALSNQKYSDFCKQFGEERVGLLTGDVSLNRENATVIVLTTEVYRNMLYD------KESGTVSDVHSVILDEFHYMNDRDRGTV 164          
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: F0YPB7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPB7_AURAN)

HSP 1 Score: 179 bits (455), Expect = 1.930e-52
Identity = 96/139 (69.06%), Postives = 107/139 (76.98%), Query Frame = 0
Query:   10 FPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 148
            FPF LD FQ +AL +L   +NVIVSAPTGSGKTVAGELAI YAL++  RVFYTTPLKALSNQK+ DF  QFG  RVGL TGDS   R+A V VMTTEVFRNM+YD+ G      E  ++VFAVVFDEFHYMND  RGTV
Sbjct:    1 FPFPLDAFQRDALRSLRADRNVIVSAPTGSGKTVAGELAIAYALSVGKRVFYTTPLKALSNQKFGDFCAQFGAGRVGLSTGDSGVRRDAAVVVMTTEVFRNMIYDDEGRA----EIAKDVFAVVFDEFHYMNDAQRGTV 135          
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: A0A3D0P8F4_9CYAN (DEAD/DEAH box helicase (Fragment) n=1 Tax=Synechococcales bacterium UBA8647 TaxID=2055797 RepID=A0A3D0P8F4_9CYAN)

HSP 1 Score: 173 bits (438), Expect = 5.140e-52
Identity = 92/141 (65.25%), Postives = 107/141 (75.89%), Query Frame = 0
Query:    8 ALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 148
            ALFPF LD FQ EA+ AL    +V+VSAPTGSGKT+ GE AI+ ALA   RVFYTTPLKALSNQK  DF++QFG +RVGL+TGD + NREA + VMTTE+FRNMLY  + DG   E+ L+ V AVV DE HYMND  RGTV
Sbjct:   11 ALFPFPLDDFQLEAVAALNQGHSVVVSAPTGSGKTLIGEYAIHRALAHGQRVFYTTPLKALSNQKLRDFREQFGADRVGLMTGDLTANREAPIVVMTTEIFRNMLYAEIEDG---EDPLEGVEAVVLDECHYMNDSQRGTV 148          
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Match: S0F3W1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3W1_CHOCR)

HSP 1 Score: 187 bits (474), Expect = 5.320e-52
Identity = 93/147 (63.27%), Postives = 114/147 (77.55%), Query Frame = 0
Query:    2 RPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIYYALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQVSVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTV 148
            + +L  + FPF LD FQT AL +LAN ++V++SAPTG+GKT+ GE+A+Y AL   LRVFYTTPLKALSNQK+ DFKK FG  RVGLLTGD + NR+A V VMTTEV+RNMLY +  + V       ++FAVVFDEFHY+NDRDRGTV
Sbjct:  113 QEKLILSTFPFKLDNFQTSALHSLANGESVVLSAPTGAGKTIVGEMAVYLALCRRLRVFYTTPLKALSNQKFYDFKKLFGERRVGLLTGDVTVNRDADVVVMTTEVYRNMLYADSTEVVSYRSVTDDLFAVVFDEFHYLNDRDRGTV 259          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9767.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z819_9STRA4.510e-6978.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L357_9PHAE1.050e-6373.65Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S4DB23_HETAK1.050e-6277.61Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9D0G8_9STRA1.810e-6073.65Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
D7G373_ECTSI4.540e-6074.32DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S2DG78_9STRA4.590e-5671.03Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0QGM8_9CRYP2.000e-5363.09Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
F0YPB7_AURAN1.930e-5269.06Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A3D0P8F4_9CYAN5.140e-5265.25DEAD/DEAH box helicase (Fragment) n=1 Tax=Synechoc... [more]
S0F3W1_CHOCR5.320e-5263.27Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 10..149
e-value: 4.0E-8
score: 43.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 22..151
score: 16.633
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 18..145
e-value: 3.0E-16
score: 59.7
NoneNo IPR availableGENE3D3.40.50.300coord: 2..150
e-value: 2.2E-48
score: 166.0
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 8..148
NoneNo IPR availablePANTHERPTHR12131:SF19DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTICcoord: 8..148
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9767contigC-tenellus_contig9767:288..2345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9767.1.1mRNA_C-tenellus_contig9767.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9767 288..2345 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9767.1.1 ID=prot_C-tenellus_contig9767.1.1|Name=mRNA_C-tenellus_contig9767.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=152bp
VRPELFQALFPFDLDGFQTEALGALANRKNVIVSAPTGSGKTVAGELAIY
YALALNLRVFYTTPLKALSNQKYADFKKQFGPERVGLLTGDSSFNREAQV
SVMTTEVFRNMLYDNVGDGVKSEEELQEVFAVVFDEFHYMNDRDRGTVRA
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase