prot_C-tenellus_contig9765.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9765.2.1
Unique Nameprot_C-tenellus_contig9765.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length135
Homology
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BLAST of mRNA_C-tenellus_contig9765.2.1 vs. uniprot
Match: D8LUA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA4_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 4.390e-16
Identity = 84/135 (62.22%), Postives = 93/135 (68.89%), Query Frame = 0 
Query:    1 MENLCLPSLRELYLHQNSITKIEGLQGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVAGLDSLVHLQVCTNLGLAGNPIMELKDVRRLGSLPSLVELTLDDVHFGTCPVVEVTGYRQFIMCFLRHV 135
            ME LCLP LRELYLHQN I+KIEGL GC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       PI+ ++ +  L  LPSL+ELTLDD+HFGTCPVV   GYR F++  L  V
Sbjct:   35 MEGLCLPGLRELYLHQNKISKIEGLDGCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PIVGVRHLSGLRGLPSLMELTLDDIHFGTCPVVAKAGYRSFVLRCLSQV 166
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BLAST of mRNA_C-tenellus_contig9765.2.1 vs. uniprot
Match: A0A8K1C5F1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5F1_PYTOL)

HSP 1 Score: 62.0 bits (149), Expect = 1.380e-8
Identity = 76/140 (54.29%), Postives = 92/140 (65.71%), Query Frame = 0 
Query:    1 MENLCLPSLRELYLHQNSITKIEGLQGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----KRVAGLDSLVHLQVCTNLGLAGNPIMELKDVRRLGSLPSLVELTLDDVHFGTCPVVEVTGYRQFIMCFLRHV 135
            ME L LP LR+LYL QN I +IEGL+ C     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     ++  GL++LV+L+    L LA N +  + D++ L  LP L EL+  D HFG+ PVV    YR   M  LR +
Sbjct:   87 MEALDLPHLRKLYLQQNLIERIEGLEQCRKLQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLQCEKGTGLNALVNLE---RLFLAKNCVRNVDDLQVLRQLPILHELSFSDAHFGSNPVVRHPEYRSLAMTSLRQL 223
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BLAST of mRNA_C-tenellus_contig9765.2.1 vs. uniprot
Match: A0A7S4V9B8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V9B8_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.550e-6
Identity = 77/137 (56.20%), Postives = 89/137 (64.96%), Query Frame = 0 
Query:    1 MENLCLPSLRELYLHQNSITKIEGLQGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVAGLDSLVHLQVCTNLGLAGNPIMELKD--VRRLGSLPSLVELTLDDVHFGTCPVVEVTGYRQFIMCFLRHV 135
            M+ L LP LREL LH+N I+KIEGL GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     GN I    D  +R L  LPS+  ++ +DV+ G  PV + TGYR FIM  L+H+
Sbjct:    1 MKGLVLPRLRELLLHENKISKIEGLDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GGNQIDCFSDCNLRCLSVLPSIRSVSFEDVYHGPNPVCKQTGYRAFIMRQLKHI 134
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BLAST of mRNA_C-tenellus_contig9765.2.1 vs. uniprot
Match: A0A662YI96_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YI96_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.600e-5
Identity = 38/130 (29.23%), Postives = 54/130 (41.54%), Query Frame = 0 
Query:    6 LPSLRELYLHQNSITKIEGLQGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVAGLDSLVHLQVCTNLGLAGNPIMELKDVRRLGSLPSLVELTLDDVHFGTCPVVEVTGYRQFIMCFLRHV 135
            LP LR LYL QN I +IEGL+                                         G+  LV+L+    L LA N I ++++   L  L +L +LT  D HFG+ P+ +   YR F +  L+ V
Sbjct:   54 LPQLRRLYLQQNRIAQIEGLERWEALLNNAIRSLKATG-----------------------GGVSELVNLKT---LNLANNRIRDVEEFEHLRKLIALRQLTFRDEHFGSNPIADHPDYRSFAITTLKQV 157
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9765.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LUA4_ECTSI4.390e-1662.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1C5F1_PYTOL1.380e-854.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S4V9B8_9STRA1.550e-656.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A662YI96_9STRA1.600e-529.23Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 6..27
e-value: 0.026
score: 23.7
coord: 50..71
e-value: 74.0
score: 8.5
coord: 28..49
e-value: 74.0
score: 8.5
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 5..110
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 5..132
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 7..45
e-value: 4.1E-9
score: 36.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 2..135
e-value: 1.8E-25
score: 90.9
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 77..98
score: 4.901
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 8..29
score: 9.206
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 52..73
score: 7.612
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 30..51
score: 7.219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9765contigC-tenellus_contig9765:3294..4369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9765.2.1mRNA_C-tenellus_contig9765.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9765 3294..4369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9765.2.1 ID=prot_C-tenellus_contig9765.2.1|Name=mRNA_C-tenellus_contig9765.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=135bp
MENLCLPSLRELYLHQNSITKIEGLQGCPSLQRLWLFSNKISAMENLHYC
GALKELWLHDNRVKRVAGLDSLVHLQVCTNLGLAGNPIMELKDVRRLGSL
PSLVELTLDDVHFGTCPVVEVTGYRQFIMCFLRHV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025875Leu-rich_rpt_4
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt