prot_C-tenellus_contig9665.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9665.4.1
Unique Nameprot_C-tenellus_contig9665.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length110
Homology
BLAST of mRNA_C-tenellus_contig9665.4.1 vs. uniprot
Match: A0A6H5L5A1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5A1_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 6.430e-16
Identity = 57/105 (54.29%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    1 MPRLLDPDRLQKEIDAQKKRAEALAHLSKHSCGPSEYERNVETKGLDQAEAEKGMGGPKLGDNTLEAVTVRKAQQSYKELCAKGALLQQQSQLRDGLQEKVTKGG 105
            M RL DP RLQKEI+AQKKRAEALA LS  S G   +            E  K   G K GDNTLE VT+RKAQQ+Y E  AK  LLQQQ+ +R+G+Q K   GG
Sbjct:    1 MSRLTDPARLQKEIEAQKKRAEALALLS--SSGGERH--------FKPGEIRKARDG-KDGDNTLEVVTLRKAQQTYLEQSAKERLLQQQNSVREGVQRKQAGGG 94          
BLAST of mRNA_C-tenellus_contig9665.4.1 vs. uniprot
Match: D7FXC0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC0_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 9.080e-16
Identity = 57/105 (54.29%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    1 MPRLLDPDRLQKEIDAQKKRAEALAHLSKHSCGPSEYERNVETKGLDQAEAEKGMGGPKLGDNTLEAVTVRKAQQSYKELCAKGALLQQQSQLRDGLQEKVTKGG 105
            M RL DP RLQKEI+AQKKRAEALA LS  S G   +            E  K   G K GDNTLE VT+RKAQQ+Y E  AK  LLQQQ+ +R+G+Q K   GG
Sbjct:    1 MSRLTDPARLQKEIEAQKKRAEALALLS--SSGGERH--------FKPGEIRKARDG-KDGDNTLEVVTLRKAQQTYLEQSAKERLLQQQNSVREGVQRKQAGGG 94          
BLAST of mRNA_C-tenellus_contig9665.4.1 vs. uniprot
Match: A0A7S2W7K5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7K5_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 5.100e-5
Identity = 36/96 (37.50%), Postives = 52/96 (54.17%), Query Frame = 0
Query:    3 RLLDPDRLQKEIDAQKKRAEALAHLSKHSCGPSEYERNVETKGLDQAEAEKGMGGPKLGDNTLEAVTVRKAQQSYKELCA----KGALLQQQSQLR 94
            ++L+  +L+KE+DAQ KRAEALA+L K+ CGPSE+E+  +   +          G +  DNTLE    R+ +            K  L+QQQ  LR
Sbjct:   64 KVLEGGKLKKELDAQAKRAEALAYLQKNGCGPSEWEKTGKVASI---------SGQR--DNTLEVTKERRRKXXXXXQARLQGLKAKLMQQQEALR 148          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9665.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L5A1_9PHAE6.430e-1654.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FXC0_ECTSI9.080e-1654.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2W7K5_9STRA5.100e-537.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9665contigC-tenellus_contig9665:3730..5835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9665.4.1mRNA_C-tenellus_contig9665.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9665 3730..5835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9665.4.1 ID=prot_C-tenellus_contig9665.4.1|Name=mRNA_C-tenellus_contig9665.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=110bp
MPRLLDPDRLQKEIDAQKKRAEALAHLSKHSCGPSEYERNVETKGLDQAE
AEKGMGGPKLGDNTLEAVTVRKAQQSYKELCAKGALLQQQSQLRDGLQEK
VTKGGGKSAG
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