prot_C-tenellus_contig9589.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9589.1.1
Unique Nameprot_C-tenellus_contig9589.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length114
Homology
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BLAST of mRNA_C-tenellus_contig9589.1.1 vs. uniprot
Match: A0A6H5JB59_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB59_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.620e-10
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0 
Query:    3 IMKRLSVGTRNGHVDEDLPNALDVLRLKPGGKPSQTSIDAARAWISVEDNNEVTNAILEDMKDQLLEESLYH 74
            +++RLS+ T+   VDEDL  AL  L L PG  P+Q S+ A + W+ VE+   +  A +ED+KD L EESL H
Sbjct:  228 LVQRLSLETKKTTVDEDLGEALKGLGLAPGATPTQASMKAVQTWLRVEEKEGIAEANIEDLKDDLCEESLAH 299
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9589.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JB59_9PHAE1.620e-1045.83DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9589contigC-tenellus_contig9589:4551..4892 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9589.1.1mRNA_C-tenellus_contig9589.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9589 4551..4892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9589.1.1 ID=prot_C-tenellus_contig9589.1.1|Name=mRNA_C-tenellus_contig9589.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=114bp
MCIMKRLSVGTRNGHVDEDLPNALDVLRLKPGGKPSQTSIDAARAWISVE
DNNEVTNAILEDMKDQLLEESLYHSDNESSGDENDNGFKGGGTPLGFMRK
GAISSVFSILPLR*
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