prot_C-tenellus_contig9571.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9571.2.1
Unique Nameprot_C-tenellus_contig9571.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length135
Homology
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Match: A0A6H5JJR2_9PHAE (DNA topoisomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR2_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.960e-70
Identity = 104/135 (77.04%), Postives = 122/135 (90.37%), Query Frame = 0
Query:    2 VIKALNVAEKPSVARELAKILGGGQARRRQGHILFEYNQIFEFD-CNMMNQSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRDLEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV 135
            VIKA+NVAEKPSVA+ELA ILGGG +RRRQG    +YN IFEFD C+MM QSV++K+TSVTGHLME+EFAEP GK+W ACQP+ELFTAP+++YVK+D +DLE+QL +EARGCQWLVLWLDCDREGENIAYEVIEV
Sbjct:    3 VIKAINVAEKPSVAKELANILGGGNSRRRQGRS--QYNPIFEFDNCSMMGQSVNMKITSVTGHLMELEFAEPYGKKWGACQPIELFTAPLIRYVKDDKKDLERQLVDEARGCQWLVLWLDCDREGENIAYEVIEV 135          
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Match: A0A4D8YX91_SALSN (DNA topoisomerase n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8YX91_SALSN)

HSP 1 Score: 162 bits (409), Expect = 4.260e-45
Identity = 75/133 (56.39%), Postives = 102/133 (76.69%), Query Frame = 0
Query:    3 IKALNVAEKPSVARELAKILGGGQARRRQGHILFEYNQIFEFDCNMMNQSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRDLEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV 135
            I+ALNVAEKPSVA+++A IL  G  R R G     YN+IFEFDC + +Q + +  TSVTGHLME+EF +   ++W++C P++L+ AP+ KYV +D  D++K LE EAR CQWL+LWLDCDREGENIA+EV+++
Sbjct:   10 IRALNVAEKPSVAKQVAGILSKGGMRARDGRS--RYNRIFEFDCVVRSQLIQMSFTSVTGHLMELEFDDRY-RKWHSCDPLDLYHAPVKKYVPQDKLDIQKTLEEEARKCQWLILWLDCDREGENIAFEVVDI 139          
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Match: A0A836XYK3_9ROSI (DNA topoisomerase n=2 Tax=Salix TaxID=40685 RepID=A0A836XYK3_9ROSI)

HSP 1 Score: 154 bits (389), Expect = 1.930e-44
Identity = 75/133 (56.39%), Postives = 99/133 (74.44%), Query Frame = 0
Query:    3 IKALNVAEKPSVARELAKILGGGQARRRQGHILFEYNQIFEFDCNMMNQSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRDLEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV 135
            IK LNVAEKPSVA+ +A IL   Q R R+G     YN+IFEF+ ++  Q   + +TSVTGHLMEV+F +   ++W++C P +L+TAP+ K+V ED  D+++ LE EAR C WLVLWLDCDREGENIA+EV+EV
Sbjct:    2 IKVLNVAEKPSVAKSVATILSRNQLRVREGRS--RYNKIFEFNYSINGQQCHMLVTSVTGHLMEVDFEDRF-RKWHSCDPADLYTAPVRKHVPEDKLDIKRTLEEEARKCHWLVLWLDCDREGENIAFEVMEV 131          
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Match: A0A835RPK4_VANPL (DNA topoisomerase n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RPK4_VANPL)

HSP 1 Score: 149 bits (375), Expect = 6.770e-43
Identity = 75/135 (55.56%), Postives = 100/135 (74.07%), Query Frame = 0
Query:    3 IKALNVAEKPSVARELAKILG--GGQARRRQGHILFEYNQIFEFDCNMMNQSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRDLEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV 135
            I+ LNVAEKPSVA+ +A+IL   GG  R RQG   F  N+IFEF+  +  Q   + +TSVTGHLME+EF +   ++W++C P +L+ AP+ K+V +D  D+++ LE EAR CQWLVLWLDCDREGENIA+EV+EV
Sbjct:    7 IRVLNVAEKPSVAKSVAEILSRSGGGMRSRQGRSRF--NRIFEFEYCIGGQPCHMLMTSVTGHLMELEFDDRF-RKWHSCDPADLYHAPVRKHVPQDKLDIKRTLEEEARMCQWLVLWLDCDREGENIAFEVVEV 138          
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Match: A0A1S4CAX6_TOBAC (DNA topoisomerase n=2 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CAX6_TOBAC)

HSP 1 Score: 152 bits (385), Expect = 1.870e-42
Identity = 75/137 (54.74%), Postives = 100/137 (72.99%), Query Frame = 0
Query:    2 VIKALNVAEKPSVARELAKILG---GGQARRRQGHILFEYNQIFEFDCNMMNQSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRDLEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV 135
            VI+ LNVAEKPSVA+ ++ IL    GG  R R G     YN+IFEF+  + NQ   +  TSVTGHLME+EF +   ++W++C P+ L+ AP+ KYV +D  D+++ LE EARGCQW++LWLDCDREGENIA+EV+EV
Sbjct:   12 VIRVLNVAEKPSVAKAVSGILSRNQGGGMRVRDGRS--RYNKIFEFNYTIRNQPCQMLFTSVTGHLMELEFDDRF-RKWHSCDPLHLYDAPVRKYVPQDKLDIKRTLEEEARGCQWIILWLDCDREGENIAFEVLEV 145          
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Match: A0A328E4P5_9ASTE (DNA topoisomerase n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328E4P5_9ASTE)

HSP 1 Score: 158 bits (400), Expect = 2.360e-42
Identity = 76/135 (56.30%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    1 MVIKALNVAEKPSVARELAKILGGGQARRRQGHILFEYNQIFEFDCNMMNQSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRDLEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV 135
            M +  LNVAEKPSVA+ +A IL   Q R R G  +  YN+IFEF+ N+ NQ   +  TSVTGHLME+EF E   ++W++C PV+L+ AP+ K+V ED  D+ + LE E+R CQWL+LWLDCDREGENIA+EV+EV
Sbjct:    1 MAVTVLNVAEKPSVAKAVAGILSNNQMRSRNGRSV--YNKIFEFNYNIQNQPCQMLFTSVTGHLMELEFDERY-RKWHSCDPVDLYAAPVRKHVPEDKLDIRRTLEEESRRCQWLILWLDCDREGENIAFEVLEV 132          
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Match: A0A484KCL6_9ASTE (DNA topoisomerase n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KCL6_9ASTE)

HSP 1 Score: 158 bits (400), Expect = 2.380e-42
Identity = 76/135 (56.30%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    1 MVIKALNVAEKPSVARELAKILGGGQARRRQGHILFEYNQIFEFDCNMMNQSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRDLEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV 135
            M +  LNVAEKPSVA+ +A IL   Q R R G  +  YN+IFEF+ N+ NQ   +  TSVTGHLME+EF E   ++W++C PV+L+ AP+ K+V ED  D+ + LE E+R CQWL+LWLDCDREGENIA+EV+EV
Sbjct:    1 MAVTVLNVAEKPSVAKAVAGILSNNQMRSRNGRSV--YNKIFEFNYNIQNQPCQMLFTSVTGHLMELEFDERY-RKWHSCDPVDLYAAPVRKHVPEDKLDIRRTLEEESRRCQWLILWLDCDREGENIAFEVLEV 132          
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Match: A0A2Z7AKT5_9LAMI (DNA topoisomerase n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AKT5_9LAMI)

HSP 1 Score: 151 bits (381), Expect = 2.870e-42
Identity = 76/137 (55.47%), Postives = 99/137 (72.26%), Query Frame = 0
Query:    3 IKALNVAEKPSVARELAKILG----GGQARRRQGHILFEYNQIFEFDCNMMNQSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRDLEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV 135
            ++ALNVAEKPSVA+ +A IL      G  R R G   F  N+IFEF+  + NQ   +  TSVTGHLME+EF E   ++W++C PV+L+ AP+ K+V +D  D++K LE EAR CQWL+LWLDCDREGENIA+EV+EV
Sbjct:    1 MRALNVAEKPSVAKAVAGILSKNPVSGGLRVRDGRSRF--NRIFEFNYTIQNQQFQMAFTSVTGHLMEIEF-EDRYRKWHSCDPVDLYHAPVRKHVPQDKSDIQKTLEEEARTCQWLILWLDCDREGENIAFEVVEV 134          
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Match: UPI00053F3E02 (DNA topoisomerase 3-alpha n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F3E02)

HSP 1 Score: 157 bits (398), Expect = 4.390e-42
Identity = 76/133 (57.14%), Postives = 100/133 (75.19%), Query Frame = 0
Query:    3 IKALNVAEKPSVARELAKILGGGQARRRQGHILFEYNQIFEFDCNMMNQSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRDLEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV 135
            I+ALNVAEKPSVA+ ++ IL G QAR R+G     YN+IFEFD  +  Q + +  TSVTGHLME+EF +   ++W++C PVEL+ AP+ K V +D  D+++ L+ E R CQWL+LWLDCDREGENIA+EVIEV
Sbjct:    7 IRALNVAEKPSVAKAVSGILSGNQARVREGRS--RYNKIFEFDYTIRGQPIHMLFTSVTGHLMELEFDDRY-RKWHSCDPVELYQAPVRKGVPQDKSDIKRTLQQEIRSCQWLILWLDCDREGENIAFEVIEV 136          
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Match: A0A5N5K7Y2_9ROSI (DNA topoisomerase n=4 Tax=Salix TaxID=40685 RepID=A0A5N5K7Y2_9ROSI)

HSP 1 Score: 152 bits (384), Expect = 5.490e-42
Identity = 74/133 (55.64%), Postives = 99/133 (74.44%), Query Frame = 0
Query:    3 IKALNVAEKPSVARELAKILGGGQARRRQGHILFEYNQIFEFDCNMMNQSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRDLEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV 135
            IK LNVAEKPSVA+ +A IL   Q R R+G     +N+IFEF+ ++  Q   + +TSVTGHLMEV+F +   ++W++C P +L+TAP+ K+V ED  D+++ LE EAR C WLVLWLDCDREGENIA+EV+EV
Sbjct:    2 IKVLNVAEKPSVAKSVATILSRNQLRVREGRS--RHNKIFEFNYSINGQQCHMLVTSVTGHLMEVDFEDRF-RKWHSCDPADLYTAPVRKHVPEDKLDIKRTLEEEARKCHWLVLWLDCDREGENIAFEVMEV 131          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9571.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJR2_9PHAE1.960e-7077.04DNA topoisomerase n=1 Tax=Ectocarpus sp. CCAP 1310... [more]
A0A4D8YX91_SALSN4.260e-4556.39DNA topoisomerase n=1 Tax=Salvia splendens TaxID=1... [more]
A0A836XYK3_9ROSI1.930e-4456.39DNA topoisomerase n=2 Tax=Salix TaxID=40685 RepID=... [more]
A0A835RPK4_VANPL6.770e-4355.56DNA topoisomerase n=1 Tax=Vanilla planifolia TaxID... [more]
A0A1S4CAX6_TOBAC1.870e-4254.74DNA topoisomerase n=2 Tax=Nicotiana TaxID=4085 Rep... [more]
A0A328E4P5_9ASTE2.360e-4256.30DNA topoisomerase n=1 Tax=Cuscuta australis TaxID=... [more]
A0A484KCL6_9ASTE2.380e-4256.30DNA topoisomerase n=1 Tax=Cuscuta campestris TaxID... [more]
A0A2Z7AKT5_9LAMI2.870e-4255.47DNA topoisomerase n=1 Tax=Dorcoceras hygrometricum... [more]
UPI00053F3E024.390e-4257.14DNA topoisomerase 3-alpha n=1 Tax=Beta vulgaris su... [more]
A0A5N5K7Y2_9ROSI5.490e-4255.64DNA topoisomerase n=4 Tax=Salix TaxID=40685 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006171TOPRIM domainSMARTSM00493toprim5coord: 4..135
e-value: 8.5E-6
score: 35.3
IPR006171TOPRIM domainPFAMPF01751Toprimcoord: 6..134
e-value: 6.7E-15
score: 55.2
IPR006171TOPRIM domainPROSITEPS50880TOPRIMcoord: 4..135
score: 15.866
NoneNo IPR availableGENE3D3.40.50.140coord: 1..135
e-value: 2.2E-42
score: 147.1
NoneNo IPR availablePANTHERPTHR11390:SF21DNA TOPOISOMERASE 3-ALPHAcoord: 4..135
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 4..135
IPR034144DNA topoisomerase 3-like, TOPRIM domainCDDcd03362TOPRIM_TopoIA_TopoIIIcoord: 4..135
e-value: 1.52269E-40
score: 130.816
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 3..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9571contigC-tenellus_contig9571:3210..5822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9571.2.1mRNA_C-tenellus_contig9571.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9571 3210..5822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9571.2.1 ID=prot_C-tenellus_contig9571.2.1|Name=mRNA_C-tenellus_contig9571.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=135bp
MVIKALNVAEKPSVARELAKILGGGQARRRQGHILFEYNQIFEFDCNMMN
QSVSVKLTSVTGHLMEVEFAEPLGKRWNACQPVELFTAPIVKYVKEDNRD
LEKQLENEARGCQWLVLWLDCDREGENIAYEVIEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006171TOPRIM_domain
IPR000380Topo_IA
IPR034144TOPRIM_TopoIII
IPR023405Topo_IA_core_domain