prot_C-tenellus_contig9348.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig9348.1.1
Unique Name	prot_C-tenellus_contig9348.1.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	49

Homology

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BLAST of mRNA_C-tenellus_contig9348.1.1 vs. uniprot
Match: D8LKM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM3_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.560e-17
Identity = 36/49 (73.47%), Postives = 44/49 (89.80%), Query Frame = 0

Query:    1 QVVLVSPALLYAFAVVLWLFDGKDIEYARELAPLSFAALCVHLFAAGEV 49
            Q+VLV+PA LYA AVV+WL   +DIE+ARELAP+SFA+LCVHLFAAGE+
Sbjct:  110 QIVLVAPAFLYAMAVVMWLSQDEDIEFARELAPVSFASLCVHLFAAGEI 158

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig9348.1.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig9348.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LKM3_ECTSI	1.560e-17	73.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 11..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..10
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 15..49

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig9348	contig	C-tenellus_contig9348:5763..5909 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig9348.1.1	mRNA_C-tenellus_contig9348.1.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig9348 5763..5909 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig9348.1.1 ID=prot_C-tenellus_contig9348.1.1|Name=mRNA_C-tenellus_contig9348.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=49bp
QVVLVSPALLYAFAVVLWLFDGKDIEYARELAPLSFAALCVHLFAAGEV